Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1248:A1247
Extra
PDB:
ATOM 1 O3' C A1247 30.939 -50.229 3.708 1.00 37.28 O
ATOM 2 P G A1248 30.894 -49.056 4.793 1.00 33.90 P
ATOM 3 OP1 G A1248 32.054 -48.177 4.543 1.00 45.90 O
ATOM 4 OP2 G A1248 30.763 -49.693 6.121 1.00 31.34 O
ATOM 5 O5' G A1248 29.554 -48.297 4.402 1.00 43.51 O
ATOM 6 C5' G A1248 29.323 -47.867 3.062 1.00 37.08 C
ATOM 7 C4' G A1248 27.854 -47.920 2.705 1.00 35.99 C
ATOM 8 O4' G A1248 27.433 -49.310 2.596 1.00 40.10 O
ATOM 9 C3' G A1248 26.896 -47.332 3.724 1.00 28.98 C
ATOM 10 O3' G A1248 26.752 -45.926 3.636 1.00 29.91 O
ATOM 11 C2' G A1248 25.606 -48.085 3.413 1.00 38.60 C
ATOM 12 O2' G A1248 25.016 -47.607 2.216 1.00 45.65 O
ATOM 13 C1' G A1248 26.142 -49.471 3.143 1.00 37.70 C
ATOM 14 N9 G A1248 26.249 -50.232 4.398 1.00 40.63 N
ATOM 15 C8 G A1248 27.332 -50.290 5.235 1.00 40.52 C
ATOM 16 N7 G A1248 27.121 -51.017 6.297 1.00 45.76 N
ATOM 17 C5 G A1248 25.808 -51.446 6.158 1.00 42.65 C
ATOM 18 C6 G A1248 25.023 -52.255 7.022 1.00 42.79 C
ATOM 19 O6 G A1248 25.341 -52.767 8.102 1.00 44.54 O
ATOM 20 N1 G A1248 23.752 -52.448 6.512 1.00 39.19 N
ATOM 21 C2 G A1248 23.286 -51.922 5.335 1.00 38.96 C
ATOM 22 N2 G A1248 22.024 -52.227 5.035 1.00 33.77 N
ATOM 23 N3 G A1248 23.996 -51.158 4.525 1.00 45.82 N
ATOM 24 C4 G A1248 25.248 -50.961 4.998 1.00 41.92 C
ATOM 25 P U A1249 28.014 -44.932 3.710 1.00 32.25 P
ATOM 26 OP1 U A1249 29.049 -45.581 4.551 1.00 34.56 O
ATOM 27 OP2 U A1249 27.502 -43.600 4.135 1.00 30.89 O
ATOM 28 O5' U A1249 28.494 -44.875 2.177 1.00 33.62 O
TER
ATOM 1 O3' C B1246 32.332 -54.833 8.430 1.00 25.63 O
ATOM 2 P C B1247 31.660 -53.404 8.212 1.00 29.55 P
ATOM 3 OP1 C B1247 32.660 -52.359 8.590 1.00 27.67 O
ATOM 4 OP2 C B1247 30.359 -53.437 8.923 1.00 47.88 O
ATOM 5 O5' C B1247 31.412 -53.403 6.639 1.00 28.77 O
ATOM 6 C5' C B1247 31.874 -52.345 5.841 1.00 31.05 C
ATOM 7 C4' C B1247 31.410 -52.478 4.430 1.00 30.25 C
ATOM 8 O4' C B1247 30.756 -53.744 4.238 1.00 32.29 O
ATOM 9 C3' C B1247 30.374 -51.477 4.005 1.00 29.92 C
ATOM 10 O3' C B1247 30.939 -50.229 3.708 1.00 37.28 O
ATOM 11 C2' C B1247 29.735 -52.157 2.816 1.00 34.90 C
ATOM 12 O2' C B1247 30.600 -52.108 1.694 1.00 38.19 O
ATOM 13 C1' C B1247 29.700 -53.588 3.308 1.00 38.35 C
ATOM 14 N1 C B1247 28.422 -53.919 3.973 1.00 40.86 N
ATOM 15 C2 C B1247 27.226 -54.020 3.243 1.00 40.75 C
ATOM 16 O2 C B1247 27.223 -53.780 2.022 1.00 37.25 O
ATOM 17 N3 C B1247 26.095 -54.378 3.884 1.00 37.77 N
ATOM 18 C4 C B1247 26.141 -54.648 5.182 1.00 39.23 C
ATOM 19 N4 C B1247 25.023 -55.000 5.817 1.00 43.30 N
ATOM 20 C5 C B1247 27.339 -54.566 5.930 1.00 39.48 C
ATOM 21 C6 C B1247 28.442 -54.204 5.293 1.00 36.83 C
ATOM 22 P G B1248 30.894 -49.056 4.793 1.00 33.90 P
ATOM 23 OP1 G B1248 32.054 -48.177 4.543 1.00 45.90 O
ATOM 24 OP2 G B1248 30.763 -49.693 6.121 1.00 31.34 O
ATOM 25 O5' G B1248 29.554 -48.297 4.402 1.00 43.51 O
TER
ATOM 2 P G A1248 30.894 -49.056 4.793 1.00 33.90 P
ATOM 3 OP1 G A1248 32.054 -48.177 4.543 1.00 45.90 O
ATOM 4 OP2 G A1248 30.763 -49.693 6.121 1.00 31.34 O
ATOM 5 O5' G A1248 29.554 -48.297 4.402 1.00 43.51 O
ATOM 6 C5' G A1248 29.323 -47.867 3.062 1.00 37.08 C
ATOM 7 C4' G A1248 27.854 -47.920 2.705 1.00 35.99 C
ATOM 8 O4' G A1248 27.433 -49.310 2.596 1.00 40.10 O
ATOM 9 C3' G A1248 26.896 -47.332 3.724 1.00 28.98 C
ATOM 10 O3' G A1248 26.752 -45.926 3.636 1.00 29.91 O
ATOM 11 C2' G A1248 25.606 -48.085 3.413 1.00 38.60 C
ATOM 12 O2' G A1248 25.016 -47.607 2.216 1.00 45.65 O
ATOM 13 C1' G A1248 26.142 -49.471 3.143 1.00 37.70 C
ATOM 14 N9 G A1248 26.249 -50.232 4.398 1.00 40.63 N
ATOM 15 C8 G A1248 27.332 -50.290 5.235 1.00 40.52 C
ATOM 16 N7 G A1248 27.121 -51.017 6.297 1.00 45.76 N
ATOM 17 C5 G A1248 25.808 -51.446 6.158 1.00 42.65 C
ATOM 18 C6 G A1248 25.023 -52.255 7.022 1.00 42.79 C
ATOM 19 O6 G A1248 25.341 -52.767 8.102 1.00 44.54 O
ATOM 20 N1 G A1248 23.752 -52.448 6.512 1.00 39.19 N
ATOM 21 C2 G A1248 23.286 -51.922 5.335 1.00 38.96 C
ATOM 22 N2 G A1248 22.024 -52.227 5.035 1.00 33.77 N
ATOM 23 N3 G A1248 23.996 -51.158 4.525 1.00 45.82 N
ATOM 24 C4 G A1248 25.248 -50.961 4.998 1.00 41.92 C
ATOM 25 P U A1249 28.014 -44.932 3.710 1.00 32.25 P
ATOM 26 OP1 U A1249 29.049 -45.581 4.551 1.00 34.56 O
ATOM 27 OP2 U A1249 27.502 -43.600 4.135 1.00 30.89 O
ATOM 28 O5' U A1249 28.494 -44.875 2.177 1.00 33.62 O
TER
ATOM 1 O3' C B1246 32.332 -54.833 8.430 1.00 25.63 O
ATOM 2 P C B1247 31.660 -53.404 8.212 1.00 29.55 P
ATOM 3 OP1 C B1247 32.660 -52.359 8.590 1.00 27.67 O
ATOM 4 OP2 C B1247 30.359 -53.437 8.923 1.00 47.88 O
ATOM 5 O5' C B1247 31.412 -53.403 6.639 1.00 28.77 O
ATOM 6 C5' C B1247 31.874 -52.345 5.841 1.00 31.05 C
ATOM 7 C4' C B1247 31.410 -52.478 4.430 1.00 30.25 C
ATOM 8 O4' C B1247 30.756 -53.744 4.238 1.00 32.29 O
ATOM 9 C3' C B1247 30.374 -51.477 4.005 1.00 29.92 C
ATOM 10 O3' C B1247 30.939 -50.229 3.708 1.00 37.28 O
ATOM 11 C2' C B1247 29.735 -52.157 2.816 1.00 34.90 C
ATOM 12 O2' C B1247 30.600 -52.108 1.694 1.00 38.19 O
ATOM 13 C1' C B1247 29.700 -53.588 3.308 1.00 38.35 C
ATOM 14 N1 C B1247 28.422 -53.919 3.973 1.00 40.86 N
ATOM 15 C2 C B1247 27.226 -54.020 3.243 1.00 40.75 C
ATOM 16 O2 C B1247 27.223 -53.780 2.022 1.00 37.25 O
ATOM 17 N3 C B1247 26.095 -54.378 3.884 1.00 37.77 N
ATOM 18 C4 C B1247 26.141 -54.648 5.182 1.00 39.23 C
ATOM 19 N4 C B1247 25.023 -55.000 5.817 1.00 43.30 N
ATOM 20 C5 C B1247 27.339 -54.566 5.930 1.00 39.48 C
ATOM 21 C6 C B1247 28.442 -54.204 5.293 1.00 36.83 C
ATOM 22 P G B1248 30.894 -49.056 4.793 1.00 33.90 P
ATOM 23 OP1 G B1248 32.054 -48.177 4.543 1.00 45.90 O
ATOM 24 OP2 G B1248 30.763 -49.693 6.121 1.00 31.34 O
ATOM 25 O5' G B1248 29.554 -48.297 4.402 1.00 43.51 O
TER
Atoms:
OP1: (32.054,-48.177,4.543)
OP2: (30.763,-49.693,6.121)
C3': (26.896,-47.332,3.724)
C1': (26.142,-49.471,3.143)
C5': (29.323,-47.867,3.062)
O6: (25.341,-52.767,8.102)
O4': (27.433,-49.310,2.596)
C8: (27.332,-50.290,5.235)
C2: (23.286,-51.922,5.335)
C6: (25.023,-52.255,7.022)
C5: (25.808,-51.446,6.158)
C4: (25.248,-50.961,4.998)
P: (30.894,-49.056,4.793)
C4': (27.854,-47.920,2.705)
C2': (25.606,-48.085,3.413)
O2': (25.016,-47.607,2.216)
N1: (23.752,-52.448,6.512)
N2: (22.024,-52.227,5.035)
N3: (23.996,-51.158,4.525)
N7: (27.121,-51.017,6.297)
N9: (26.249,-50.232,4.398)
O5': (29.554,-48.297,4.402)
O3': (26.752,-45.926,3.636)
OP2: (30.763,-49.693,6.121)
C3': (26.896,-47.332,3.724)
C1': (26.142,-49.471,3.143)
C5': (29.323,-47.867,3.062)
O6: (25.341,-52.767,8.102)
O4': (27.433,-49.310,2.596)
C8: (27.332,-50.290,5.235)
C2: (23.286,-51.922,5.335)
C6: (25.023,-52.255,7.022)
C5: (25.808,-51.446,6.158)
C4: (25.248,-50.961,4.998)
P: (30.894,-49.056,4.793)
C4': (27.854,-47.920,2.705)
C2': (25.606,-48.085,3.413)
O2': (25.016,-47.607,2.216)
N1: (23.752,-52.448,6.512)
N2: (22.024,-52.227,5.035)
N3: (23.996,-51.158,4.525)
N7: (27.121,-51.017,6.297)
N9: (26.249,-50.232,4.398)
O5': (29.554,-48.297,4.402)
O3': (26.752,-45.926,3.636)
C2: (27.226,-54.020,3.243)
OP1: (32.660,-52.359,8.590)
OP2: (30.359,-53.437,8.923)
C4: (26.141,-54.648,5.182)
O5': (31.412,-53.403,6.639)
C3': (30.374,-51.477,4.005)
C1': (29.700,-53.588,3.308)
O4': (30.756,-53.744,4.238)
C5': (31.874,-52.345,5.841)
P: (31.660,-53.404,8.212)
O2: (27.223,-53.780,2.022)
C4': (31.410,-52.478,4.430)
C2': (29.735,-52.157,2.816)
O2': (30.600,-52.108,1.694)
N1: (28.422,-53.919,3.973)
N3: (26.095,-54.378,3.884)
N4: (25.023,-55.000,5.817)
C6: (28.442,-54.204,5.293)
C5: (27.339,-54.566,5.930)
O3': (30.939,-50.229,3.708)
OP1: (32.660,-52.359,8.590)
OP2: (30.359,-53.437,8.923)
C4: (26.141,-54.648,5.182)
O5': (31.412,-53.403,6.639)
C3': (30.374,-51.477,4.005)
C1': (29.700,-53.588,3.308)
O4': (30.756,-53.744,4.238)
C5': (31.874,-52.345,5.841)
P: (31.660,-53.404,8.212)
O2: (27.223,-53.780,2.022)
C4': (31.410,-52.478,4.430)
C2': (29.735,-52.157,2.816)
O2': (30.600,-52.108,1.694)
N1: (28.422,-53.919,3.973)
N3: (26.095,-54.378,3.884)
N4: (25.023,-55.000,5.817)
C6: (28.442,-54.204,5.293)
C5: (27.339,-54.566,5.930)
O3': (30.939,-50.229,3.708)
Image (generated by PyMOL):