Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2053:A2493
Extra
PDB:
ATOM 1 O3' A A2052 -40.285 135.746 168.842 1.00 0.01 O
ATOM 2 P G A2053 -40.321 135.687 167.224 1.00 0.01 P
ATOM 3 OP1 G A2053 -38.983 135.313 166.774 1.00 0.01 O
ATOM 4 OP2 G A2053 -40.879 136.933 166.736 1.00 0.01 O
ATOM 5 O5' G A2053 -41.325 134.497 166.932 1.00 0.01 O
ATOM 6 C5' G A2053 -40.833 133.157 166.805 1.00 0.01 C
ATOM 7 C4' G A2053 -40.739 132.721 165.363 1.00 0.01 C
ATOM 8 O4' G A2053 -41.420 131.443 165.191 1.00 0.01 O
ATOM 9 C3' G A2053 -41.385 133.661 164.361 1.00 0.01 C
ATOM 10 O3' G A2053 -40.670 133.577 163.138 1.00 0.01 O
ATOM 11 C2' G A2053 -42.755 133.036 164.186 1.00 0.01 C
ATOM 12 O2' G A2053 -43.442 133.429 163.019 1.00 0.01 O
ATOM 13 C1' G A2053 -42.378 131.567 164.170 1.00 0.01 C
ATOM 14 N9 G A2053 -43.485 130.678 164.456 1.00 0.01 N
ATOM 15 C8 G A2053 -44.217 130.799 165.580 1.00 0.01 C
ATOM 16 N7 G A2053 -45.193 129.941 165.641 1.00 0.01 N
ATOM 17 C5 G A2053 -45.114 129.188 164.480 1.00 0.01 C
ATOM 18 C6 G A2053 -45.955 128.114 164.030 1.00 0.01 C
ATOM 19 O6 G A2053 -46.955 127.582 164.587 1.00 0.01 O
ATOM 20 N1 G A2053 -45.525 127.665 162.795 1.00 0.01 N
ATOM 21 C2 G A2053 -44.455 128.152 162.101 1.00 0.01 C
ATOM 22 N2 G A2053 -44.229 127.558 160.917 1.00 0.01 N
ATOM 23 N3 G A2053 -43.666 129.138 162.523 1.00 0.01 N
ATOM 24 C4 G A2053 -44.047 129.637 163.723 1.00 0.01 C
ATOM 25 P A A2054 -40.583 134.823 162.167 1.00 20.20 P
ATOM 26 OP1 A A2054 -40.019 135.919 162.930 1.00 20.20 O
ATOM 27 OP2 A A2054 -41.907 134.992 161.557 1.00 20.20 O
ATOM 28 O5' A A2054 -39.547 134.334 161.094 1.00 20.20 O
TER
ATOM 1 O3' U B2492 -49.213 129.723 171.655 1.00 0.01 O
ATOM 2 P C B2493 -49.011 131.263 171.264 1.00 0.01 P
ATOM 3 OP1 C B2493 -47.795 131.728 171.975 1.00 0.01 O
ATOM 4 OP2 C B2493 -50.316 131.948 171.517 1.00 0.01 O
ATOM 5 O5' C B2493 -48.703 131.199 169.709 1.00 0.01 O
ATOM 6 C5' C B2493 -47.484 130.633 169.256 1.00 0.01 C
ATOM 7 C4' C B2493 -46.982 131.267 167.985 1.00 0.01 C
ATOM 8 O4' C B2493 -47.879 130.988 166.893 1.00 0.01 O
ATOM 9 C3' C B2493 -46.787 132.773 168.001 1.00 0.01 C
ATOM 10 O3' C B2493 -45.437 133.099 168.321 1.00 0.01 O
ATOM 11 C2' C B2493 -47.213 133.231 166.586 1.00 0.01 C
ATOM 12 O2' C B2493 -46.109 133.736 165.854 1.00 0.01 O
ATOM 13 C1' C B2493 -47.712 131.943 165.907 1.00 0.01 C
ATOM 14 N1 C B2493 -48.984 132.108 165.177 1.00 0.01 N
ATOM 15 C2 C B2493 -49.157 131.421 163.993 1.00 0.01 C
ATOM 16 O2 C B2493 -48.265 130.717 163.595 1.00 0.01 O
ATOM 17 N3 C B2493 -50.269 131.526 163.276 1.00 0.01 N
ATOM 18 C4 C B2493 -51.226 132.306 163.721 1.00 0.01 C
ATOM 19 N4 C B2493 -52.326 132.396 163.012 1.00 0.01 N
ATOM 20 C5 C B2493 -51.130 133.035 164.916 1.00 0.01 C
ATOM 21 C6 C B2493 -49.996 132.898 165.614 1.00 0.01 C
ATOM 22 P G B2494 -45.051 134.431 169.131 1.00 0.01 P
ATOM 23 OP1 G B2494 -45.797 134.397 170.412 1.00 0.01 O
ATOM 24 OP2 G B2494 -45.259 135.553 168.230 1.00 0.01 O
ATOM 25 O5' G B2494 -43.486 134.274 169.408 1.00 0.01 O
TER
ATOM 2 P G A2053 -40.321 135.687 167.224 1.00 0.01 P
ATOM 3 OP1 G A2053 -38.983 135.313 166.774 1.00 0.01 O
ATOM 4 OP2 G A2053 -40.879 136.933 166.736 1.00 0.01 O
ATOM 5 O5' G A2053 -41.325 134.497 166.932 1.00 0.01 O
ATOM 6 C5' G A2053 -40.833 133.157 166.805 1.00 0.01 C
ATOM 7 C4' G A2053 -40.739 132.721 165.363 1.00 0.01 C
ATOM 8 O4' G A2053 -41.420 131.443 165.191 1.00 0.01 O
ATOM 9 C3' G A2053 -41.385 133.661 164.361 1.00 0.01 C
ATOM 10 O3' G A2053 -40.670 133.577 163.138 1.00 0.01 O
ATOM 11 C2' G A2053 -42.755 133.036 164.186 1.00 0.01 C
ATOM 12 O2' G A2053 -43.442 133.429 163.019 1.00 0.01 O
ATOM 13 C1' G A2053 -42.378 131.567 164.170 1.00 0.01 C
ATOM 14 N9 G A2053 -43.485 130.678 164.456 1.00 0.01 N
ATOM 15 C8 G A2053 -44.217 130.799 165.580 1.00 0.01 C
ATOM 16 N7 G A2053 -45.193 129.941 165.641 1.00 0.01 N
ATOM 17 C5 G A2053 -45.114 129.188 164.480 1.00 0.01 C
ATOM 18 C6 G A2053 -45.955 128.114 164.030 1.00 0.01 C
ATOM 19 O6 G A2053 -46.955 127.582 164.587 1.00 0.01 O
ATOM 20 N1 G A2053 -45.525 127.665 162.795 1.00 0.01 N
ATOM 21 C2 G A2053 -44.455 128.152 162.101 1.00 0.01 C
ATOM 22 N2 G A2053 -44.229 127.558 160.917 1.00 0.01 N
ATOM 23 N3 G A2053 -43.666 129.138 162.523 1.00 0.01 N
ATOM 24 C4 G A2053 -44.047 129.637 163.723 1.00 0.01 C
ATOM 25 P A A2054 -40.583 134.823 162.167 1.00 20.20 P
ATOM 26 OP1 A A2054 -40.019 135.919 162.930 1.00 20.20 O
ATOM 27 OP2 A A2054 -41.907 134.992 161.557 1.00 20.20 O
ATOM 28 O5' A A2054 -39.547 134.334 161.094 1.00 20.20 O
TER
ATOM 1 O3' U B2492 -49.213 129.723 171.655 1.00 0.01 O
ATOM 2 P C B2493 -49.011 131.263 171.264 1.00 0.01 P
ATOM 3 OP1 C B2493 -47.795 131.728 171.975 1.00 0.01 O
ATOM 4 OP2 C B2493 -50.316 131.948 171.517 1.00 0.01 O
ATOM 5 O5' C B2493 -48.703 131.199 169.709 1.00 0.01 O
ATOM 6 C5' C B2493 -47.484 130.633 169.256 1.00 0.01 C
ATOM 7 C4' C B2493 -46.982 131.267 167.985 1.00 0.01 C
ATOM 8 O4' C B2493 -47.879 130.988 166.893 1.00 0.01 O
ATOM 9 C3' C B2493 -46.787 132.773 168.001 1.00 0.01 C
ATOM 10 O3' C B2493 -45.437 133.099 168.321 1.00 0.01 O
ATOM 11 C2' C B2493 -47.213 133.231 166.586 1.00 0.01 C
ATOM 12 O2' C B2493 -46.109 133.736 165.854 1.00 0.01 O
ATOM 13 C1' C B2493 -47.712 131.943 165.907 1.00 0.01 C
ATOM 14 N1 C B2493 -48.984 132.108 165.177 1.00 0.01 N
ATOM 15 C2 C B2493 -49.157 131.421 163.993 1.00 0.01 C
ATOM 16 O2 C B2493 -48.265 130.717 163.595 1.00 0.01 O
ATOM 17 N3 C B2493 -50.269 131.526 163.276 1.00 0.01 N
ATOM 18 C4 C B2493 -51.226 132.306 163.721 1.00 0.01 C
ATOM 19 N4 C B2493 -52.326 132.396 163.012 1.00 0.01 N
ATOM 20 C5 C B2493 -51.130 133.035 164.916 1.00 0.01 C
ATOM 21 C6 C B2493 -49.996 132.898 165.614 1.00 0.01 C
ATOM 22 P G B2494 -45.051 134.431 169.131 1.00 0.01 P
ATOM 23 OP1 G B2494 -45.797 134.397 170.412 1.00 0.01 O
ATOM 24 OP2 G B2494 -45.259 135.553 168.230 1.00 0.01 O
ATOM 25 O5' G B2494 -43.486 134.274 169.408 1.00 0.01 O
TER
Atoms:
OP1: (-38.983,135.313,166.774)
OP2: (-40.879,136.933,166.736)
C3': (-41.385,133.661,164.361)
C1': (-42.378,131.567,164.170)
C5': (-40.833,133.157,166.805)
O6: (-46.955,127.582,164.587)
O4': (-41.420,131.443,165.191)
C8: (-44.217,130.799,165.580)
C2: (-44.455,128.152,162.101)
C6: (-45.955,128.114,164.030)
C5: (-45.114,129.188,164.480)
C4: (-44.047,129.637,163.723)
P: (-40.321,135.687,167.224)
C4': (-40.739,132.721,165.363)
C2': (-42.755,133.036,164.186)
O2': (-43.442,133.429,163.019)
N1: (-45.525,127.665,162.795)
N2: (-44.229,127.558,160.917)
N3: (-43.666,129.138,162.523)
N7: (-45.193,129.941,165.641)
N9: (-43.485,130.678,164.456)
O5': (-41.325,134.497,166.932)
O3': (-40.670,133.577,163.138)
OP2: (-40.879,136.933,166.736)
C3': (-41.385,133.661,164.361)
C1': (-42.378,131.567,164.170)
C5': (-40.833,133.157,166.805)
O6: (-46.955,127.582,164.587)
O4': (-41.420,131.443,165.191)
C8: (-44.217,130.799,165.580)
C2: (-44.455,128.152,162.101)
C6: (-45.955,128.114,164.030)
C5: (-45.114,129.188,164.480)
C4: (-44.047,129.637,163.723)
P: (-40.321,135.687,167.224)
C4': (-40.739,132.721,165.363)
C2': (-42.755,133.036,164.186)
O2': (-43.442,133.429,163.019)
N1: (-45.525,127.665,162.795)
N2: (-44.229,127.558,160.917)
N3: (-43.666,129.138,162.523)
N7: (-45.193,129.941,165.641)
N9: (-43.485,130.678,164.456)
O5': (-41.325,134.497,166.932)
O3': (-40.670,133.577,163.138)
C2: (-49.157,131.421,163.993)
OP1: (-47.795,131.728,171.975)
OP2: (-50.316,131.948,171.517)
C4: (-51.226,132.306,163.721)
O5': (-48.703,131.199,169.709)
C3': (-46.787,132.773,168.001)
C1': (-47.712,131.943,165.907)
O4': (-47.879,130.988,166.893)
C5': (-47.484,130.633,169.256)
P: (-49.011,131.263,171.264)
O2: (-48.265,130.717,163.595)
C4': (-46.982,131.267,167.985)
C2': (-47.213,133.231,166.586)
O2': (-46.109,133.736,165.854)
N1: (-48.984,132.108,165.177)
N3: (-50.269,131.526,163.276)
N4: (-52.326,132.396,163.012)
C6: (-49.996,132.898,165.614)
C5: (-51.130,133.035,164.916)
O3': (-45.437,133.099,168.321)
OP1: (-47.795,131.728,171.975)
OP2: (-50.316,131.948,171.517)
C4: (-51.226,132.306,163.721)
O5': (-48.703,131.199,169.709)
C3': (-46.787,132.773,168.001)
C1': (-47.712,131.943,165.907)
O4': (-47.879,130.988,166.893)
C5': (-47.484,130.633,169.256)
P: (-49.011,131.263,171.264)
O2: (-48.265,130.717,163.595)
C4': (-46.982,131.267,167.985)
C2': (-47.213,133.231,166.586)
O2': (-46.109,133.736,165.854)
N1: (-48.984,132.108,165.177)
N3: (-50.269,131.526,163.276)
N4: (-52.326,132.396,163.012)
C6: (-49.996,132.898,165.614)
C5: (-51.130,133.035,164.916)
O3': (-45.437,133.099,168.321)
Image (generated by PyMOL):