Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12079:12055
Extra
PDB:
ATOM 1 O3' A A2078 -19.635 -20.350 82.560 1.00 57.70 O
ATOM 2 P G A2079 -20.655 -21.155 81.592 1.00 58.94 P
ATOM 3 OP1 G A2079 -21.924 -21.340 82.359 1.00 59.34 O
ATOM 4 OP2 G A2079 -19.950 -22.349 81.080 1.00 58.79 O
ATOM 5 O5' G A2079 -20.883 -20.158 80.411 1.00 58.90 O
ATOM 6 C5' G A2079 -19.944 -20.063 79.390 1.00 58.60 C
ATOM 7 C4' G A2079 -19.029 -18.932 79.646 1.00 58.32 C
ATOM 8 O4' G A2079 -17.673 -19.417 79.577 1.00 57.98 O
ATOM 9 C3' G A2079 -19.123 -17.793 78.657 1.00 58.27 C
ATOM 10 O3' G A2079 -18.736 -16.606 79.314 1.00 58.16 O
ATOM 11 C2' G A2079 -18.054 -18.162 77.651 1.00 57.96 C
ATOM 12 O2' G A2079 -17.568 -17.075 76.913 1.00 57.78 O
ATOM 13 C1' G A2079 -16.979 -18.736 78.565 1.00 57.73 C
ATOM 14 N9 G A2079 -16.090 -19.692 77.915 1.00 57.52 N
ATOM 15 C8 G A2079 -14.734 -19.530 77.694 1.00 57.16 C
ATOM 16 N7 G A2079 -14.180 -20.550 77.077 1.00 57.06 N
ATOM 17 C5 G A2079 -15.239 -21.445 76.907 1.00 57.36 C
ATOM 18 C6 G A2079 -15.230 -22.720 76.274 1.00 57.42 C
ATOM 19 O6 G A2079 -14.230 -23.309 75.765 1.00 57.20 O
ATOM 20 N1 G A2079 -16.528 -23.283 76.304 1.00 57.79 N
ATOM 21 C2 G A2079 -17.641 -22.680 76.855 1.00 58.05 C
ATOM 22 N2 G A2079 -18.769 -23.374 76.775 1.00 58.39 N
ATOM 23 N3 G A2079 -17.648 -21.497 77.438 1.00 58.00 N
ATOM 24 C4 G A2079 -16.424 -20.942 77.431 1.00 57.65 C
ATOM 25 P G A2080 -19.809 -15.495 79.742 1.00 58.83 P
ATOM 26 OP1 G A2080 -19.906 -15.509 81.235 1.00 58.92 O
ATOM 27 OP2 G A2080 -21.043 -15.706 78.938 1.00 59.14 O
ATOM 28 O5' G A2080 -19.093 -14.168 79.268 1.00 58.60 O
TER
ATOM 1 O3' G B2054 -8.343 -15.935 79.975 1.00 45.99 O
ATOM 2 P C B2055 -8.825 -14.755 79.060 1.00 54.93 P
ATOM 3 OP1 C B2055 -8.295 -15.001 77.710 1.00 54.76 O
ATOM 4 OP2 C B2055 -8.449 -13.530 79.731 1.00 54.86 O
ATOM 5 O5' C B2055 -10.419 -14.904 79.090 1.00 55.29 O
ATOM 6 C5' C B2055 -11.075 -16.145 78.990 1.00 55.46 C
ATOM 7 C4' C B2055 -12.435 -16.082 79.662 1.00 55.81 C
ATOM 8 O4' C B2055 -12.285 -15.615 81.022 1.00 55.84 O
ATOM 9 C3' C B2055 -13.488 -15.134 79.055 1.00 56.02 C
ATOM 10 O3' C B2055 -14.229 -15.749 78.017 1.00 56.17 O
ATOM 11 C2' C B2055 -14.386 -14.782 80.242 1.00 56.29 C
ATOM 12 O2' C B2055 -15.470 -15.704 80.333 1.00 56.58 O
ATOM 13 C1' C B2055 -13.477 -15.001 81.450 1.00 56.14 C
ATOM 14 N1 C B2055 -13.151 -13.766 82.148 1.00 56.09 N
ATOM 15 C2 C B2055 -14.143 -13.210 82.952 1.00 56.38 C
ATOM 16 O2 C B2055 -15.255 -13.733 83.008 1.00 56.66 O
ATOM 17 N3 C B2055 -13.819 -12.102 83.657 1.00 56.35 N
ATOM 18 C4 C B2055 -12.603 -11.589 83.573 1.00 56.05 C
ATOM 19 N4 C B2055 -12.354 -10.495 84.258 1.00 56.06 N
ATOM 20 C5 C B2055 -11.615 -12.149 82.763 1.00 55.76 C
ATOM 21 C6 C B2055 -11.908 -13.234 82.072 1.00 55.78 C
ATOM 22 P G B2056 -14.489 -15.002 76.625 1.00 75.66 P
ATOM 23 OP1 G B2056 -13.363 -14.040 76.401 1.00 75.36 O
ATOM 24 OP2 G B2056 -15.876 -14.492 76.656 1.00 76.00 O
ATOM 25 O5' G B2056 -14.365 -16.211 75.615 1.00 75.63 O
TER
ATOM 2 P G A2079 -20.655 -21.155 81.592 1.00 58.94 P
ATOM 3 OP1 G A2079 -21.924 -21.340 82.359 1.00 59.34 O
ATOM 4 OP2 G A2079 -19.950 -22.349 81.080 1.00 58.79 O
ATOM 5 O5' G A2079 -20.883 -20.158 80.411 1.00 58.90 O
ATOM 6 C5' G A2079 -19.944 -20.063 79.390 1.00 58.60 C
ATOM 7 C4' G A2079 -19.029 -18.932 79.646 1.00 58.32 C
ATOM 8 O4' G A2079 -17.673 -19.417 79.577 1.00 57.98 O
ATOM 9 C3' G A2079 -19.123 -17.793 78.657 1.00 58.27 C
ATOM 10 O3' G A2079 -18.736 -16.606 79.314 1.00 58.16 O
ATOM 11 C2' G A2079 -18.054 -18.162 77.651 1.00 57.96 C
ATOM 12 O2' G A2079 -17.568 -17.075 76.913 1.00 57.78 O
ATOM 13 C1' G A2079 -16.979 -18.736 78.565 1.00 57.73 C
ATOM 14 N9 G A2079 -16.090 -19.692 77.915 1.00 57.52 N
ATOM 15 C8 G A2079 -14.734 -19.530 77.694 1.00 57.16 C
ATOM 16 N7 G A2079 -14.180 -20.550 77.077 1.00 57.06 N
ATOM 17 C5 G A2079 -15.239 -21.445 76.907 1.00 57.36 C
ATOM 18 C6 G A2079 -15.230 -22.720 76.274 1.00 57.42 C
ATOM 19 O6 G A2079 -14.230 -23.309 75.765 1.00 57.20 O
ATOM 20 N1 G A2079 -16.528 -23.283 76.304 1.00 57.79 N
ATOM 21 C2 G A2079 -17.641 -22.680 76.855 1.00 58.05 C
ATOM 22 N2 G A2079 -18.769 -23.374 76.775 1.00 58.39 N
ATOM 23 N3 G A2079 -17.648 -21.497 77.438 1.00 58.00 N
ATOM 24 C4 G A2079 -16.424 -20.942 77.431 1.00 57.65 C
ATOM 25 P G A2080 -19.809 -15.495 79.742 1.00 58.83 P
ATOM 26 OP1 G A2080 -19.906 -15.509 81.235 1.00 58.92 O
ATOM 27 OP2 G A2080 -21.043 -15.706 78.938 1.00 59.14 O
ATOM 28 O5' G A2080 -19.093 -14.168 79.268 1.00 58.60 O
TER
ATOM 1 O3' G B2054 -8.343 -15.935 79.975 1.00 45.99 O
ATOM 2 P C B2055 -8.825 -14.755 79.060 1.00 54.93 P
ATOM 3 OP1 C B2055 -8.295 -15.001 77.710 1.00 54.76 O
ATOM 4 OP2 C B2055 -8.449 -13.530 79.731 1.00 54.86 O
ATOM 5 O5' C B2055 -10.419 -14.904 79.090 1.00 55.29 O
ATOM 6 C5' C B2055 -11.075 -16.145 78.990 1.00 55.46 C
ATOM 7 C4' C B2055 -12.435 -16.082 79.662 1.00 55.81 C
ATOM 8 O4' C B2055 -12.285 -15.615 81.022 1.00 55.84 O
ATOM 9 C3' C B2055 -13.488 -15.134 79.055 1.00 56.02 C
ATOM 10 O3' C B2055 -14.229 -15.749 78.017 1.00 56.17 O
ATOM 11 C2' C B2055 -14.386 -14.782 80.242 1.00 56.29 C
ATOM 12 O2' C B2055 -15.470 -15.704 80.333 1.00 56.58 O
ATOM 13 C1' C B2055 -13.477 -15.001 81.450 1.00 56.14 C
ATOM 14 N1 C B2055 -13.151 -13.766 82.148 1.00 56.09 N
ATOM 15 C2 C B2055 -14.143 -13.210 82.952 1.00 56.38 C
ATOM 16 O2 C B2055 -15.255 -13.733 83.008 1.00 56.66 O
ATOM 17 N3 C B2055 -13.819 -12.102 83.657 1.00 56.35 N
ATOM 18 C4 C B2055 -12.603 -11.589 83.573 1.00 56.05 C
ATOM 19 N4 C B2055 -12.354 -10.495 84.258 1.00 56.06 N
ATOM 20 C5 C B2055 -11.615 -12.149 82.763 1.00 55.76 C
ATOM 21 C6 C B2055 -11.908 -13.234 82.072 1.00 55.78 C
ATOM 22 P G B2056 -14.489 -15.002 76.625 1.00 75.66 P
ATOM 23 OP1 G B2056 -13.363 -14.040 76.401 1.00 75.36 O
ATOM 24 OP2 G B2056 -15.876 -14.492 76.656 1.00 76.00 O
ATOM 25 O5' G B2056 -14.365 -16.211 75.615 1.00 75.63 O
TER
Atoms:
OP1: (-21.924,-21.340,82.359)
OP2: (-19.950,-22.349,81.080)
C3': (-19.123,-17.793,78.657)
C1': (-16.979,-18.736,78.565)
C5': (-19.944,-20.063,79.390)
O6: (-14.230,-23.309,75.765)
O4': (-17.673,-19.417,79.577)
C8: (-14.734,-19.530,77.694)
C2: (-17.641,-22.680,76.855)
C6: (-15.230,-22.720,76.274)
C5: (-15.239,-21.445,76.907)
C4: (-16.424,-20.942,77.431)
P: (-20.655,-21.155,81.592)
C4': (-19.029,-18.932,79.646)
C2': (-18.054,-18.162,77.651)
O2': (-17.568,-17.075,76.913)
N1: (-16.528,-23.283,76.304)
N2: (-18.769,-23.374,76.775)
N3: (-17.648,-21.497,77.438)
N7: (-14.180,-20.550,77.077)
N9: (-16.090,-19.692,77.915)
O5': (-20.883,-20.158,80.411)
O3': (-18.736,-16.606,79.314)
OP2: (-19.950,-22.349,81.080)
C3': (-19.123,-17.793,78.657)
C1': (-16.979,-18.736,78.565)
C5': (-19.944,-20.063,79.390)
O6: (-14.230,-23.309,75.765)
O4': (-17.673,-19.417,79.577)
C8: (-14.734,-19.530,77.694)
C2: (-17.641,-22.680,76.855)
C6: (-15.230,-22.720,76.274)
C5: (-15.239,-21.445,76.907)
C4: (-16.424,-20.942,77.431)
P: (-20.655,-21.155,81.592)
C4': (-19.029,-18.932,79.646)
C2': (-18.054,-18.162,77.651)
O2': (-17.568,-17.075,76.913)
N1: (-16.528,-23.283,76.304)
N2: (-18.769,-23.374,76.775)
N3: (-17.648,-21.497,77.438)
N7: (-14.180,-20.550,77.077)
N9: (-16.090,-19.692,77.915)
O5': (-20.883,-20.158,80.411)
O3': (-18.736,-16.606,79.314)
C2: (-14.143,-13.210,82.952)
OP1: (-8.295,-15.001,77.710)
OP2: (-8.449,-13.530,79.731)
C4: (-12.603,-11.589,83.573)
O5': (-10.419,-14.904,79.090)
C3': (-13.488,-15.134,79.055)
C1': (-13.477,-15.001,81.450)
O4': (-12.285,-15.615,81.022)
C5': (-11.075,-16.145,78.990)
P: (-8.825,-14.755,79.060)
O2: (-15.255,-13.733,83.008)
C4': (-12.435,-16.082,79.662)
C2': (-14.386,-14.782,80.242)
O2': (-15.470,-15.704,80.333)
N1: (-13.151,-13.766,82.148)
N3: (-13.819,-12.102,83.657)
N4: (-12.354,-10.495,84.258)
C6: (-11.908,-13.234,82.072)
C5: (-11.615,-12.149,82.763)
O3': (-14.229,-15.749,78.017)
OP1: (-8.295,-15.001,77.710)
OP2: (-8.449,-13.530,79.731)
C4: (-12.603,-11.589,83.573)
O5': (-10.419,-14.904,79.090)
C3': (-13.488,-15.134,79.055)
C1': (-13.477,-15.001,81.450)
O4': (-12.285,-15.615,81.022)
C5': (-11.075,-16.145,78.990)
P: (-8.825,-14.755,79.060)
O2: (-15.255,-13.733,83.008)
C4': (-12.435,-16.082,79.662)
C2': (-14.386,-14.782,80.242)
O2': (-15.470,-15.704,80.333)
N1: (-13.151,-13.766,82.148)
N3: (-13.819,-12.102,83.657)
N4: (-12.354,-10.495,84.258)
C6: (-11.908,-13.234,82.072)
C5: (-11.615,-12.149,82.763)
O3': (-14.229,-15.749,78.017)
Image (generated by PyMOL):