Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12210:12622
Extra
PDB:
ATOM 1 O3' A A2209 38.846 0.163 72.321 1.00 83.26 O
ATOM 2 P G A2210 37.484 -0.715 72.287 1.00 96.76 P
ATOM 3 OP1 G A2210 36.827 -0.540 73.602 1.00 96.84 O
ATOM 4 OP2 G A2210 37.840 -2.116 71.828 1.00 96.66 O
ATOM 5 O5' G A2210 36.639 0.021 71.136 1.00 96.78 O
ATOM 6 C5' G A2210 35.708 1.067 71.424 1.00 96.88 C
ATOM 7 C4' G A2210 34.276 0.570 71.341 1.00 96.89 C
ATOM 8 O4' G A2210 33.601 1.244 70.241 1.00 96.93 O
ATOM 9 C3' G A2210 34.135 -0.924 71.052 1.00 96.80 C
ATOM 10 O3' G A2210 33.828 -1.761 72.218 1.00 96.81 O
ATOM 11 C2' G A2210 33.039 -1.047 69.985 1.00 96.81 C
ATOM 12 O2' G A2210 31.938 -1.841 70.365 1.00 96.83 O
ATOM 13 C1' G A2210 32.611 0.386 69.686 1.00 96.90 C
ATOM 14 N9 G A2210 32.513 0.620 68.241 1.00 96.90 N
ATOM 15 C8 G A2210 33.612 0.519 67.415 1.00 96.83 C
ATOM 16 N7 G A2210 33.325 0.671 66.155 1.00 96.85 N
ATOM 17 C5 G A2210 31.944 0.849 66.125 1.00 96.92 C
ATOM 18 C6 G A2210 31.102 1.063 64.992 1.00 96.99 C
ATOM 19 O6 G A2210 31.472 1.123 63.801 1.00 96.99 O
ATOM 20 N1 G A2210 29.756 1.193 65.375 1.00 97.07 N
ATOM 21 C2 G A2210 29.280 1.131 66.680 1.00 97.10 C
ATOM 22 N2 G A2210 27.951 1.287 66.849 1.00 97.20 N
ATOM 23 N3 G A2210 30.076 0.935 67.741 1.00 97.04 N
ATOM 24 C4 G A2210 31.400 0.796 67.408 1.00 96.95 C
ATOM 25 P A A2211 33.157 -1.228 73.594 1.00138.28 P
ATOM 26 OP1 A A2211 34.074 -0.231 74.198 1.00138.34 O
ATOM 27 OP2 A A2211 32.823 -2.435 74.387 1.00138.28 O
ATOM 28 O5' A A2211 31.824 -0.525 73.100 1.00138.36 O
TER
ATOM 1 O3' U B2621 38.332 0.591 61.307 1.00 38.54 O
ATOM 2 P C B2622 38.781 -0.504 62.381 1.00 55.35 P
ATOM 3 OP1 C B2622 39.761 0.129 63.267 1.00 55.35 O
ATOM 4 OP2 C B2622 39.197 -1.713 61.627 1.00 55.30 O
ATOM 5 O5' C B2622 37.446 -0.800 63.171 1.00 55.36 O
ATOM 6 C5' C B2622 37.040 0.006 64.249 1.00 55.40 C
ATOM 7 C4' C B2622 35.979 -0.684 65.081 1.00 55.39 C
ATOM 8 O4' C B2622 35.056 -1.425 64.237 1.00 55.39 O
ATOM 9 C3' C B2622 36.467 -1.720 66.088 1.00 55.32 C
ATOM 10 O3' C B2622 36.991 -1.123 67.314 1.00 55.34 O
ATOM 11 C2' C B2622 35.224 -2.638 66.283 1.00 55.32 C
ATOM 12 O2' C B2622 34.495 -2.296 67.452 1.00 55.37 O
ATOM 13 C1' C B2622 34.353 -2.322 65.054 1.00 55.37 C
ATOM 14 N1 C B2622 33.918 -3.529 64.289 1.00 55.35 N
ATOM 15 C2 C B2622 32.546 -3.525 64.134 1.00 55.42 C
ATOM 16 O2 C B2622 31.939 -2.554 64.579 1.00 55.48 O
ATOM 17 N3 C B2622 31.918 -4.534 63.485 1.00 55.43 N
ATOM 18 C4 C B2622 32.596 -5.567 63.041 1.00 55.37 C
ATOM 19 N4 C B2622 31.821 -6.440 62.448 1.00 55.41 N
ATOM 20 C5 C B2622 34.011 -5.690 63.169 1.00 55.30 C
ATOM 21 C6 C B2622 34.605 -4.639 63.800 1.00 55.30 C
ATOM 22 P G B2623 38.471 -1.542 67.928 1.00 87.03 P
ATOM 23 OP1 G B2623 39.441 -1.584 66.798 1.00 87.00 O
ATOM 24 OP2 G B2623 38.278 -2.782 68.777 1.00 87.00 O
ATOM 25 O5' G B2623 38.816 -0.320 68.879 1.00 87.11 O
TER
ATOM 2 P G A2210 37.484 -0.715 72.287 1.00 96.76 P
ATOM 3 OP1 G A2210 36.827 -0.540 73.602 1.00 96.84 O
ATOM 4 OP2 G A2210 37.840 -2.116 71.828 1.00 96.66 O
ATOM 5 O5' G A2210 36.639 0.021 71.136 1.00 96.78 O
ATOM 6 C5' G A2210 35.708 1.067 71.424 1.00 96.88 C
ATOM 7 C4' G A2210 34.276 0.570 71.341 1.00 96.89 C
ATOM 8 O4' G A2210 33.601 1.244 70.241 1.00 96.93 O
ATOM 9 C3' G A2210 34.135 -0.924 71.052 1.00 96.80 C
ATOM 10 O3' G A2210 33.828 -1.761 72.218 1.00 96.81 O
ATOM 11 C2' G A2210 33.039 -1.047 69.985 1.00 96.81 C
ATOM 12 O2' G A2210 31.938 -1.841 70.365 1.00 96.83 O
ATOM 13 C1' G A2210 32.611 0.386 69.686 1.00 96.90 C
ATOM 14 N9 G A2210 32.513 0.620 68.241 1.00 96.90 N
ATOM 15 C8 G A2210 33.612 0.519 67.415 1.00 96.83 C
ATOM 16 N7 G A2210 33.325 0.671 66.155 1.00 96.85 N
ATOM 17 C5 G A2210 31.944 0.849 66.125 1.00 96.92 C
ATOM 18 C6 G A2210 31.102 1.063 64.992 1.00 96.99 C
ATOM 19 O6 G A2210 31.472 1.123 63.801 1.00 96.99 O
ATOM 20 N1 G A2210 29.756 1.193 65.375 1.00 97.07 N
ATOM 21 C2 G A2210 29.280 1.131 66.680 1.00 97.10 C
ATOM 22 N2 G A2210 27.951 1.287 66.849 1.00 97.20 N
ATOM 23 N3 G A2210 30.076 0.935 67.741 1.00 97.04 N
ATOM 24 C4 G A2210 31.400 0.796 67.408 1.00 96.95 C
ATOM 25 P A A2211 33.157 -1.228 73.594 1.00138.28 P
ATOM 26 OP1 A A2211 34.074 -0.231 74.198 1.00138.34 O
ATOM 27 OP2 A A2211 32.823 -2.435 74.387 1.00138.28 O
ATOM 28 O5' A A2211 31.824 -0.525 73.100 1.00138.36 O
TER
ATOM 1 O3' U B2621 38.332 0.591 61.307 1.00 38.54 O
ATOM 2 P C B2622 38.781 -0.504 62.381 1.00 55.35 P
ATOM 3 OP1 C B2622 39.761 0.129 63.267 1.00 55.35 O
ATOM 4 OP2 C B2622 39.197 -1.713 61.627 1.00 55.30 O
ATOM 5 O5' C B2622 37.446 -0.800 63.171 1.00 55.36 O
ATOM 6 C5' C B2622 37.040 0.006 64.249 1.00 55.40 C
ATOM 7 C4' C B2622 35.979 -0.684 65.081 1.00 55.39 C
ATOM 8 O4' C B2622 35.056 -1.425 64.237 1.00 55.39 O
ATOM 9 C3' C B2622 36.467 -1.720 66.088 1.00 55.32 C
ATOM 10 O3' C B2622 36.991 -1.123 67.314 1.00 55.34 O
ATOM 11 C2' C B2622 35.224 -2.638 66.283 1.00 55.32 C
ATOM 12 O2' C B2622 34.495 -2.296 67.452 1.00 55.37 O
ATOM 13 C1' C B2622 34.353 -2.322 65.054 1.00 55.37 C
ATOM 14 N1 C B2622 33.918 -3.529 64.289 1.00 55.35 N
ATOM 15 C2 C B2622 32.546 -3.525 64.134 1.00 55.42 C
ATOM 16 O2 C B2622 31.939 -2.554 64.579 1.00 55.48 O
ATOM 17 N3 C B2622 31.918 -4.534 63.485 1.00 55.43 N
ATOM 18 C4 C B2622 32.596 -5.567 63.041 1.00 55.37 C
ATOM 19 N4 C B2622 31.821 -6.440 62.448 1.00 55.41 N
ATOM 20 C5 C B2622 34.011 -5.690 63.169 1.00 55.30 C
ATOM 21 C6 C B2622 34.605 -4.639 63.800 1.00 55.30 C
ATOM 22 P G B2623 38.471 -1.542 67.928 1.00 87.03 P
ATOM 23 OP1 G B2623 39.441 -1.584 66.798 1.00 87.00 O
ATOM 24 OP2 G B2623 38.278 -2.782 68.777 1.00 87.00 O
ATOM 25 O5' G B2623 38.816 -0.320 68.879 1.00 87.11 O
TER
Atoms:
OP1: (36.827,-0.540,73.602)
OP2: (37.840,-2.116,71.828)
C3': (34.135,-0.924,71.052)
C1': (32.611,0.386,69.686)
C5': (35.708,1.067,71.424)
O6: (31.472,1.123,63.801)
O4': (33.601,1.244,70.241)
C8: (33.612,0.519,67.415)
C2: (29.280,1.131,66.680)
C6: (31.102,1.063,64.992)
C5: (31.944,0.849,66.125)
C4: (31.400,0.796,67.408)
P: (37.484,-0.715,72.287)
C4': (34.276,0.570,71.341)
C2': (33.039,-1.047,69.985)
O2': (31.938,-1.841,70.365)
N1: (29.756,1.193,65.375)
N2: (27.951,1.287,66.849)
N3: (30.076,0.935,67.741)
N7: (33.325,0.671,66.155)
N9: (32.513,0.620,68.241)
O5': (36.639,0.021,71.136)
O3': (33.828,-1.761,72.218)
OP2: (37.840,-2.116,71.828)
C3': (34.135,-0.924,71.052)
C1': (32.611,0.386,69.686)
C5': (35.708,1.067,71.424)
O6: (31.472,1.123,63.801)
O4': (33.601,1.244,70.241)
C8: (33.612,0.519,67.415)
C2: (29.280,1.131,66.680)
C6: (31.102,1.063,64.992)
C5: (31.944,0.849,66.125)
C4: (31.400,0.796,67.408)
P: (37.484,-0.715,72.287)
C4': (34.276,0.570,71.341)
C2': (33.039,-1.047,69.985)
O2': (31.938,-1.841,70.365)
N1: (29.756,1.193,65.375)
N2: (27.951,1.287,66.849)
N3: (30.076,0.935,67.741)
N7: (33.325,0.671,66.155)
N9: (32.513,0.620,68.241)
O5': (36.639,0.021,71.136)
O3': (33.828,-1.761,72.218)
C2: (32.546,-3.525,64.134)
OP1: (39.761,0.129,63.267)
OP2: (39.197,-1.713,61.627)
C4: (32.596,-5.567,63.041)
O5': (37.446,-0.800,63.171)
C3': (36.467,-1.720,66.088)
C1': (34.353,-2.322,65.054)
O4': (35.056,-1.425,64.237)
C5': (37.040,0.006,64.249)
P: (38.781,-0.504,62.381)
O2: (31.939,-2.554,64.579)
C4': (35.979,-0.684,65.081)
C2': (35.224,-2.638,66.283)
O2': (34.495,-2.296,67.452)
N1: (33.918,-3.529,64.289)
N3: (31.918,-4.534,63.485)
N4: (31.821,-6.440,62.448)
C6: (34.605,-4.639,63.800)
C5: (34.011,-5.690,63.169)
O3': (36.991,-1.123,67.314)
OP1: (39.761,0.129,63.267)
OP2: (39.197,-1.713,61.627)
C4: (32.596,-5.567,63.041)
O5': (37.446,-0.800,63.171)
C3': (36.467,-1.720,66.088)
C1': (34.353,-2.322,65.054)
O4': (35.056,-1.425,64.237)
C5': (37.040,0.006,64.249)
P: (38.781,-0.504,62.381)
O2: (31.939,-2.554,64.579)
C4': (35.979,-0.684,65.081)
C2': (35.224,-2.638,66.283)
O2': (34.495,-2.296,67.452)
N1: (33.918,-3.529,64.289)
N3: (31.918,-4.534,63.485)
N4: (31.821,-6.440,62.448)
C6: (34.605,-4.639,63.800)
C5: (34.011,-5.690,63.169)
O3': (36.991,-1.123,67.314)
Image (generated by PyMOL):