Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1281:A1319
Extra
PDB:
ATOM 1 O3' A A1280 -18.684 -74.682 -4.905 1.00 0.01 O
ATOM 2 P G A1281 -18.205 -74.163 -3.491 1.00 0.01 P
ATOM 3 OP1 G A1281 -16.892 -73.547 -3.671 1.00 0.01 O
ATOM 4 OP2 G A1281 -18.345 -75.269 -2.551 1.00 0.01 O
ATOM 5 O5' G A1281 -19.249 -73.057 -3.149 1.00 0.01 O
ATOM 6 C5' G A1281 -18.827 -71.745 -2.862 1.00 0.01 C
ATOM 7 C4' G A1281 -19.751 -71.074 -1.885 1.00 0.01 C
ATOM 8 O4' G A1281 -21.114 -71.581 -2.045 1.00 0.01 O
ATOM 9 C3' G A1281 -19.399 -71.279 -0.424 1.00 0.01 C
ATOM 10 O3' G A1281 -19.617 -70.072 0.271 1.00 0.01 O
ATOM 11 C2' G A1281 -20.411 -72.315 0.032 1.00 0.01 C
ATOM 12 O2' G A1281 -20.664 -72.310 1.425 1.00 0.01 O
ATOM 13 C1' G A1281 -21.622 -71.894 -0.778 1.00 0.01 C
ATOM 14 N9 G A1281 -22.641 -72.912 -0.915 1.00 0.01 N
ATOM 15 C8 G A1281 -23.919 -72.735 -0.562 1.00 0.01 C
ATOM 16 N7 G A1281 -24.645 -73.772 -0.754 1.00 0.01 N
ATOM 17 C5 G A1281 -23.788 -74.700 -1.264 1.00 0.01 C
ATOM 18 C6 G A1281 -24.025 -76.029 -1.663 1.00 0.01 C
ATOM 19 O6 G A1281 -25.069 -76.670 -1.636 1.00 0.01 O
ATOM 20 N1 G A1281 -22.899 -76.648 -2.125 1.00 0.01 N
ATOM 21 C2 G A1281 -21.700 -76.030 -2.193 1.00 0.01 C
ATOM 22 N2 G A1281 -20.741 -76.792 -2.677 1.00 0.01 N
ATOM 23 N3 G A1281 -21.432 -74.791 -1.838 1.00 0.01 N
ATOM 24 C4 G A1281 -22.536 -74.180 -1.373 1.00 0.01 C
ATOM 25 P C A1282 -18.388 -69.112 0.558 1.00 0.01 P
ATOM 26 OP1 C A1282 -18.919 -67.935 1.278 1.00 0.01 O
ATOM 27 OP2 C A1282 -17.686 -68.911 -0.716 1.00 0.01 O
ATOM 28 O5' C A1282 -17.498 -69.975 1.543 1.00 0.01 O
TER
ATOM 1 O3' U B1318 -33.248 -73.235 5.847 1.00 0.01 O
ATOM 2 P U B1319 -32.112 -74.308 6.038 1.00 0.01 P
ATOM 3 OP1 U B1319 -32.674 -75.416 6.816 1.00 0.01 O
ATOM 4 OP2 U B1319 -30.956 -73.611 6.554 1.00 0.01 O
ATOM 5 O5' U B1319 -31.818 -74.781 4.578 1.00 0.01 O
ATOM 6 C5' U B1319 -32.620 -75.746 3.957 1.00 0.01 C
ATOM 7 C4' U B1319 -31.944 -76.300 2.745 1.00 0.01 C
ATOM 8 O4' U B1319 -31.585 -75.230 1.860 1.00 0.01 O
ATOM 9 C3' U B1319 -30.638 -77.014 2.989 1.00 0.01 C
ATOM 10 O3' U B1319 -30.822 -78.340 3.438 1.00 0.01 O
ATOM 11 C2' U B1319 -29.957 -76.936 1.635 1.00 0.01 C
ATOM 12 O2' U B1319 -30.375 -78.007 0.805 1.00 0.01 O
ATOM 13 C1' U B1319 -30.509 -75.633 1.062 1.00 0.01 C
ATOM 14 N1 U B1319 -29.508 -74.558 1.001 1.00 0.01 N
ATOM 15 C2 U B1319 -28.350 -74.857 0.358 1.00 0.01 C
ATOM 16 O2 U B1319 -28.117 -75.955 -0.100 1.00 0.01 O
ATOM 17 N3 U B1319 -27.452 -73.855 0.284 1.00 0.01 N
ATOM 18 C4 U B1319 -27.595 -72.590 0.739 1.00 0.01 C
ATOM 19 O4 U B1319 -26.683 -71.794 0.560 1.00 0.01 O
ATOM 20 C5 U B1319 -28.837 -72.334 1.377 1.00 0.01 C
ATOM 21 C6 U B1319 -29.737 -73.305 1.475 1.00 0.01 C
ATOM 22 P A B1320 -29.827 -78.957 4.519 1.00 0.01 P
ATOM 23 OP1 A B1320 -30.323 -80.296 4.860 1.00 0.01 O
ATOM 24 OP2 A B1320 -29.689 -77.955 5.588 1.00 0.01 O
ATOM 25 O5' A B1320 -28.472 -79.068 3.712 1.00 0.01 O
TER
ATOM 2 P G A1281 -18.205 -74.163 -3.491 1.00 0.01 P
ATOM 3 OP1 G A1281 -16.892 -73.547 -3.671 1.00 0.01 O
ATOM 4 OP2 G A1281 -18.345 -75.269 -2.551 1.00 0.01 O
ATOM 5 O5' G A1281 -19.249 -73.057 -3.149 1.00 0.01 O
ATOM 6 C5' G A1281 -18.827 -71.745 -2.862 1.00 0.01 C
ATOM 7 C4' G A1281 -19.751 -71.074 -1.885 1.00 0.01 C
ATOM 8 O4' G A1281 -21.114 -71.581 -2.045 1.00 0.01 O
ATOM 9 C3' G A1281 -19.399 -71.279 -0.424 1.00 0.01 C
ATOM 10 O3' G A1281 -19.617 -70.072 0.271 1.00 0.01 O
ATOM 11 C2' G A1281 -20.411 -72.315 0.032 1.00 0.01 C
ATOM 12 O2' G A1281 -20.664 -72.310 1.425 1.00 0.01 O
ATOM 13 C1' G A1281 -21.622 -71.894 -0.778 1.00 0.01 C
ATOM 14 N9 G A1281 -22.641 -72.912 -0.915 1.00 0.01 N
ATOM 15 C8 G A1281 -23.919 -72.735 -0.562 1.00 0.01 C
ATOM 16 N7 G A1281 -24.645 -73.772 -0.754 1.00 0.01 N
ATOM 17 C5 G A1281 -23.788 -74.700 -1.264 1.00 0.01 C
ATOM 18 C6 G A1281 -24.025 -76.029 -1.663 1.00 0.01 C
ATOM 19 O6 G A1281 -25.069 -76.670 -1.636 1.00 0.01 O
ATOM 20 N1 G A1281 -22.899 -76.648 -2.125 1.00 0.01 N
ATOM 21 C2 G A1281 -21.700 -76.030 -2.193 1.00 0.01 C
ATOM 22 N2 G A1281 -20.741 -76.792 -2.677 1.00 0.01 N
ATOM 23 N3 G A1281 -21.432 -74.791 -1.838 1.00 0.01 N
ATOM 24 C4 G A1281 -22.536 -74.180 -1.373 1.00 0.01 C
ATOM 25 P C A1282 -18.388 -69.112 0.558 1.00 0.01 P
ATOM 26 OP1 C A1282 -18.919 -67.935 1.278 1.00 0.01 O
ATOM 27 OP2 C A1282 -17.686 -68.911 -0.716 1.00 0.01 O
ATOM 28 O5' C A1282 -17.498 -69.975 1.543 1.00 0.01 O
TER
ATOM 1 O3' U B1318 -33.248 -73.235 5.847 1.00 0.01 O
ATOM 2 P U B1319 -32.112 -74.308 6.038 1.00 0.01 P
ATOM 3 OP1 U B1319 -32.674 -75.416 6.816 1.00 0.01 O
ATOM 4 OP2 U B1319 -30.956 -73.611 6.554 1.00 0.01 O
ATOM 5 O5' U B1319 -31.818 -74.781 4.578 1.00 0.01 O
ATOM 6 C5' U B1319 -32.620 -75.746 3.957 1.00 0.01 C
ATOM 7 C4' U B1319 -31.944 -76.300 2.745 1.00 0.01 C
ATOM 8 O4' U B1319 -31.585 -75.230 1.860 1.00 0.01 O
ATOM 9 C3' U B1319 -30.638 -77.014 2.989 1.00 0.01 C
ATOM 10 O3' U B1319 -30.822 -78.340 3.438 1.00 0.01 O
ATOM 11 C2' U B1319 -29.957 -76.936 1.635 1.00 0.01 C
ATOM 12 O2' U B1319 -30.375 -78.007 0.805 1.00 0.01 O
ATOM 13 C1' U B1319 -30.509 -75.633 1.062 1.00 0.01 C
ATOM 14 N1 U B1319 -29.508 -74.558 1.001 1.00 0.01 N
ATOM 15 C2 U B1319 -28.350 -74.857 0.358 1.00 0.01 C
ATOM 16 O2 U B1319 -28.117 -75.955 -0.100 1.00 0.01 O
ATOM 17 N3 U B1319 -27.452 -73.855 0.284 1.00 0.01 N
ATOM 18 C4 U B1319 -27.595 -72.590 0.739 1.00 0.01 C
ATOM 19 O4 U B1319 -26.683 -71.794 0.560 1.00 0.01 O
ATOM 20 C5 U B1319 -28.837 -72.334 1.377 1.00 0.01 C
ATOM 21 C6 U B1319 -29.737 -73.305 1.475 1.00 0.01 C
ATOM 22 P A B1320 -29.827 -78.957 4.519 1.00 0.01 P
ATOM 23 OP1 A B1320 -30.323 -80.296 4.860 1.00 0.01 O
ATOM 24 OP2 A B1320 -29.689 -77.955 5.588 1.00 0.01 O
ATOM 25 O5' A B1320 -28.472 -79.068 3.712 1.00 0.01 O
TER
Atoms:
OP1: (-16.892,-73.547,-3.671)
OP2: (-18.345,-75.269,-2.551)
C3': (-19.399,-71.279,-0.424)
C1': (-21.622,-71.894,-0.778)
C5': (-18.827,-71.745,-2.862)
O6: (-25.069,-76.670,-1.636)
O4': (-21.114,-71.581,-2.045)
C8: (-23.919,-72.735,-0.562)
C2: (-21.700,-76.030,-2.193)
C6: (-24.025,-76.029,-1.663)
C5: (-23.788,-74.700,-1.264)
C4: (-22.536,-74.180,-1.373)
P: (-18.205,-74.163,-3.491)
C4': (-19.751,-71.074,-1.885)
C2': (-20.411,-72.315,0.032)
O2': (-20.664,-72.310,1.425)
N1: (-22.899,-76.648,-2.125)
N2: (-20.741,-76.792,-2.677)
N3: (-21.432,-74.791,-1.838)
N7: (-24.645,-73.772,-0.754)
N9: (-22.641,-72.912,-0.915)
O5': (-19.249,-73.057,-3.149)
O3': (-19.617,-70.072,0.271)
OP2: (-18.345,-75.269,-2.551)
C3': (-19.399,-71.279,-0.424)
C1': (-21.622,-71.894,-0.778)
C5': (-18.827,-71.745,-2.862)
O6: (-25.069,-76.670,-1.636)
O4': (-21.114,-71.581,-2.045)
C8: (-23.919,-72.735,-0.562)
C2: (-21.700,-76.030,-2.193)
C6: (-24.025,-76.029,-1.663)
C5: (-23.788,-74.700,-1.264)
C4: (-22.536,-74.180,-1.373)
P: (-18.205,-74.163,-3.491)
C4': (-19.751,-71.074,-1.885)
C2': (-20.411,-72.315,0.032)
O2': (-20.664,-72.310,1.425)
N1: (-22.899,-76.648,-2.125)
N2: (-20.741,-76.792,-2.677)
N3: (-21.432,-74.791,-1.838)
N7: (-24.645,-73.772,-0.754)
N9: (-22.641,-72.912,-0.915)
O5': (-19.249,-73.057,-3.149)
O3': (-19.617,-70.072,0.271)
C4: (-27.595,-72.590,0.739)
N3: (-27.452,-73.855,0.284)
OP1: (-32.674,-75.416,6.816)
OP2: (-30.956,-73.611,6.554)
C2: (-28.350,-74.857,0.358)
C1': (-30.509,-75.633,1.062)
C3': (-30.638,-77.014,2.989)
O5': (-31.818,-74.781,4.578)
O4': (-31.585,-75.230,1.860)
C5': (-32.620,-75.746,3.957)
P: (-32.112,-74.308,6.038)
C4': (-31.944,-76.300,2.745)
C2': (-29.957,-76.936,1.635)
O2': (-30.375,-78.007,0.805)
N1: (-29.508,-74.558,1.001)
O4: (-26.683,-71.794,0.560)
O2: (-28.117,-75.955,-0.100)
C6: (-29.737,-73.305,1.475)
C5: (-28.837,-72.334,1.377)
O3': (-30.822,-78.340,3.438)
N3: (-27.452,-73.855,0.284)
OP1: (-32.674,-75.416,6.816)
OP2: (-30.956,-73.611,6.554)
C2: (-28.350,-74.857,0.358)
C1': (-30.509,-75.633,1.062)
C3': (-30.638,-77.014,2.989)
O5': (-31.818,-74.781,4.578)
O4': (-31.585,-75.230,1.860)
C5': (-32.620,-75.746,3.957)
P: (-32.112,-74.308,6.038)
C4': (-31.944,-76.300,2.745)
C2': (-29.957,-76.936,1.635)
O2': (-30.375,-78.007,0.805)
N1: (-29.508,-74.558,1.001)
O4: (-26.683,-71.794,0.560)
O2: (-28.117,-75.955,-0.100)
C6: (-29.737,-73.305,1.475)
C5: (-28.837,-72.334,1.377)
O3': (-30.822,-78.340,3.438)
Image (generated by PyMOL):