Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B12:B11
Extra
PDB:
ATOM 1 O3' U A 11 -11.266 -31.553 4.299 1.00 42.92 O
ATOM 2 P G A 12 -10.808 -30.065 4.723 1.00 51.67 P
ATOM 3 OP1 G A 12 -11.265 -29.800 6.116 1.00 48.12 O
ATOM 4 OP2 G A 12 -11.172 -29.155 3.598 1.00 41.11 O
ATOM 5 O5' G A 12 -9.187 -30.154 4.784 1.00 43.97 O
ATOM 6 C5' G A 12 -8.485 -30.996 5.739 1.00 41.12 C
ATOM 7 C4' G A 12 -7.249 -31.604 5.125 1.00 41.12 C
ATOM 8 O4' G A 12 -7.670 -32.702 4.222 1.00 40.66 O
ATOM 9 C3' G A 12 -6.486 -30.698 4.161 1.00 42.10 C
ATOM 10 O3' G A 12 -5.588 -29.833 4.765 1.00 39.86 O
ATOM 11 C2' G A 12 -5.697 -31.758 3.352 1.00 42.39 C
ATOM 12 O2' G A 12 -4.795 -32.512 4.125 1.00 38.43 O
ATOM 13 C1' G A 12 -6.795 -32.725 3.107 1.00 38.03 C
ATOM 14 N9 G A 12 -7.578 -32.554 1.917 1.00 43.34 N
ATOM 15 C8 G A 12 -8.900 -32.174 1.820 1.00 43.45 C
ATOM 16 N7 G A 12 -9.335 -32.168 0.589 1.00 42.39 N
ATOM 17 C5 G A 12 -8.234 -32.634 -0.161 1.00 48.12 C
ATOM 18 C6 G A 12 -8.091 -32.895 -1.558 1.00 48.37 C
ATOM 19 O6 G A 12 -8.949 -32.743 -2.415 1.00 44.95 O
ATOM 20 N1 G A 12 -6.819 -33.344 -1.908 1.00 44.88 N
ATOM 21 C2 G A 12 -5.785 -33.552 -1.014 1.00 44.46 C
ATOM 22 N2 G A 12 -4.605 -34.012 -1.498 1.00 39.01 N
ATOM 23 N3 G A 12 -5.905 -33.330 0.299 1.00 45.14 N
ATOM 24 C4 G A 12 -7.150 -32.887 0.643 1.00 45.00 C
ATOM 25 P C A 13 -5.241 -28.412 4.164 1.00 39.60 P
ATOM 26 OP1 C A 13 -4.330 -27.768 5.142 1.00 44.24 O
ATOM 27 OP2 C A 13 -6.485 -27.822 3.557 1.00 41.13 O
ATOM 28 O5' C A 13 -4.317 -28.738 2.900 1.00 43.08 O
TER
ATOM 1 O3' G B 10 -11.554 -35.925 8.705 1.00 44.69 O
ATOM 2 P U B 11 -11.582 -34.297 8.761 1.00 40.40 P
ATOM 3 OP1 U B 11 -10.209 -33.915 9.118 1.00 44.47 O
ATOM 4 OP2 U B 11 -12.789 -33.889 9.514 1.00 42.66 O
ATOM 5 O5' U B 11 -11.789 -33.789 7.289 1.00 40.39 O
ATOM 6 C5' U B 11 -10.811 -34.061 6.317 1.00 42.03 C
ATOM 7 C4' U B 11 -11.456 -33.762 4.988 1.00 44.84 C
ATOM 8 O4' U B 11 -12.489 -34.734 4.759 1.00 42.94 O
ATOM 9 C3' U B 11 -12.160 -32.413 4.943 1.00 42.42 C
ATOM 10 O3' U B 11 -11.266 -31.553 4.299 1.00 42.92 O
ATOM 11 C2' U B 11 -13.241 -32.691 3.930 1.00 44.06 C
ATOM 12 O2' U B 11 -12.692 -32.440 2.673 1.00 50.01 O
ATOM 13 C1' U B 11 -13.510 -34.185 3.979 1.00 45.72 C
ATOM 14 N1 U B 11 -14.799 -34.419 4.565 1.00 48.24 N
ATOM 15 C2 U B 11 -15.764 -34.976 3.783 1.00 46.70 C
ATOM 16 O2 U B 11 -15.570 -35.292 2.623 1.00 52.22 O
ATOM 17 N3 U B 11 -16.977 -35.164 4.385 1.00 46.60 N
ATOM 18 C4 U B 11 -17.350 -34.782 5.642 1.00 51.72 C
ATOM 19 O4 U B 11 -18.498 -34.998 5.996 1.00 53.76 O
ATOM 20 C5 U B 11 -16.293 -34.198 6.421 1.00 50.96 C
ATOM 21 C6 U B 11 -15.080 -34.048 5.862 1.00 48.00 C
ATOM 22 P G B 12 -10.808 -30.065 4.723 1.00 51.67 P
ATOM 23 OP1 G B 12 -11.265 -29.800 6.116 1.00 48.12 O
ATOM 24 OP2 G B 12 -11.172 -29.155 3.598 1.00 41.11 O
ATOM 25 O5' G B 12 -9.187 -30.154 4.784 1.00 43.97 O
TER
ATOM 2 P G A 12 -10.808 -30.065 4.723 1.00 51.67 P
ATOM 3 OP1 G A 12 -11.265 -29.800 6.116 1.00 48.12 O
ATOM 4 OP2 G A 12 -11.172 -29.155 3.598 1.00 41.11 O
ATOM 5 O5' G A 12 -9.187 -30.154 4.784 1.00 43.97 O
ATOM 6 C5' G A 12 -8.485 -30.996 5.739 1.00 41.12 C
ATOM 7 C4' G A 12 -7.249 -31.604 5.125 1.00 41.12 C
ATOM 8 O4' G A 12 -7.670 -32.702 4.222 1.00 40.66 O
ATOM 9 C3' G A 12 -6.486 -30.698 4.161 1.00 42.10 C
ATOM 10 O3' G A 12 -5.588 -29.833 4.765 1.00 39.86 O
ATOM 11 C2' G A 12 -5.697 -31.758 3.352 1.00 42.39 C
ATOM 12 O2' G A 12 -4.795 -32.512 4.125 1.00 38.43 O
ATOM 13 C1' G A 12 -6.795 -32.725 3.107 1.00 38.03 C
ATOM 14 N9 G A 12 -7.578 -32.554 1.917 1.00 43.34 N
ATOM 15 C8 G A 12 -8.900 -32.174 1.820 1.00 43.45 C
ATOM 16 N7 G A 12 -9.335 -32.168 0.589 1.00 42.39 N
ATOM 17 C5 G A 12 -8.234 -32.634 -0.161 1.00 48.12 C
ATOM 18 C6 G A 12 -8.091 -32.895 -1.558 1.00 48.37 C
ATOM 19 O6 G A 12 -8.949 -32.743 -2.415 1.00 44.95 O
ATOM 20 N1 G A 12 -6.819 -33.344 -1.908 1.00 44.88 N
ATOM 21 C2 G A 12 -5.785 -33.552 -1.014 1.00 44.46 C
ATOM 22 N2 G A 12 -4.605 -34.012 -1.498 1.00 39.01 N
ATOM 23 N3 G A 12 -5.905 -33.330 0.299 1.00 45.14 N
ATOM 24 C4 G A 12 -7.150 -32.887 0.643 1.00 45.00 C
ATOM 25 P C A 13 -5.241 -28.412 4.164 1.00 39.60 P
ATOM 26 OP1 C A 13 -4.330 -27.768 5.142 1.00 44.24 O
ATOM 27 OP2 C A 13 -6.485 -27.822 3.557 1.00 41.13 O
ATOM 28 O5' C A 13 -4.317 -28.738 2.900 1.00 43.08 O
TER
ATOM 1 O3' G B 10 -11.554 -35.925 8.705 1.00 44.69 O
ATOM 2 P U B 11 -11.582 -34.297 8.761 1.00 40.40 P
ATOM 3 OP1 U B 11 -10.209 -33.915 9.118 1.00 44.47 O
ATOM 4 OP2 U B 11 -12.789 -33.889 9.514 1.00 42.66 O
ATOM 5 O5' U B 11 -11.789 -33.789 7.289 1.00 40.39 O
ATOM 6 C5' U B 11 -10.811 -34.061 6.317 1.00 42.03 C
ATOM 7 C4' U B 11 -11.456 -33.762 4.988 1.00 44.84 C
ATOM 8 O4' U B 11 -12.489 -34.734 4.759 1.00 42.94 O
ATOM 9 C3' U B 11 -12.160 -32.413 4.943 1.00 42.42 C
ATOM 10 O3' U B 11 -11.266 -31.553 4.299 1.00 42.92 O
ATOM 11 C2' U B 11 -13.241 -32.691 3.930 1.00 44.06 C
ATOM 12 O2' U B 11 -12.692 -32.440 2.673 1.00 50.01 O
ATOM 13 C1' U B 11 -13.510 -34.185 3.979 1.00 45.72 C
ATOM 14 N1 U B 11 -14.799 -34.419 4.565 1.00 48.24 N
ATOM 15 C2 U B 11 -15.764 -34.976 3.783 1.00 46.70 C
ATOM 16 O2 U B 11 -15.570 -35.292 2.623 1.00 52.22 O
ATOM 17 N3 U B 11 -16.977 -35.164 4.385 1.00 46.60 N
ATOM 18 C4 U B 11 -17.350 -34.782 5.642 1.00 51.72 C
ATOM 19 O4 U B 11 -18.498 -34.998 5.996 1.00 53.76 O
ATOM 20 C5 U B 11 -16.293 -34.198 6.421 1.00 50.96 C
ATOM 21 C6 U B 11 -15.080 -34.048 5.862 1.00 48.00 C
ATOM 22 P G B 12 -10.808 -30.065 4.723 1.00 51.67 P
ATOM 23 OP1 G B 12 -11.265 -29.800 6.116 1.00 48.12 O
ATOM 24 OP2 G B 12 -11.172 -29.155 3.598 1.00 41.11 O
ATOM 25 O5' G B 12 -9.187 -30.154 4.784 1.00 43.97 O
TER
Atoms:
OP1: (-11.265,-29.800,6.116)
OP2: (-11.172,-29.155,3.598)
C3': (-6.486,-30.698,4.161)
C1': (-6.795,-32.725,3.107)
C5': (-8.485,-30.996,5.739)
O6: (-8.949,-32.743,-2.415)
O4': (-7.670,-32.702,4.222)
C8: (-8.900,-32.174,1.820)
C2: (-5.785,-33.552,-1.014)
C6: (-8.091,-32.895,-1.558)
C5: (-8.234,-32.634,-0.161)
C4: (-7.150,-32.887,0.643)
P: (-10.808,-30.065,4.723)
C4': (-7.249,-31.604,5.125)
C2': (-5.697,-31.758,3.352)
O2': (-4.795,-32.512,4.125)
N1: (-6.819,-33.344,-1.908)
N2: (-4.605,-34.012,-1.498)
N3: (-5.905,-33.330,0.299)
N7: (-9.335,-32.168,0.589)
N9: (-7.578,-32.554,1.917)
O5': (-9.187,-30.154,4.784)
O3': (-5.588,-29.833,4.765)
OP2: (-11.172,-29.155,3.598)
C3': (-6.486,-30.698,4.161)
C1': (-6.795,-32.725,3.107)
C5': (-8.485,-30.996,5.739)
O6: (-8.949,-32.743,-2.415)
O4': (-7.670,-32.702,4.222)
C8: (-8.900,-32.174,1.820)
C2: (-5.785,-33.552,-1.014)
C6: (-8.091,-32.895,-1.558)
C5: (-8.234,-32.634,-0.161)
C4: (-7.150,-32.887,0.643)
P: (-10.808,-30.065,4.723)
C4': (-7.249,-31.604,5.125)
C2': (-5.697,-31.758,3.352)
O2': (-4.795,-32.512,4.125)
N1: (-6.819,-33.344,-1.908)
N2: (-4.605,-34.012,-1.498)
N3: (-5.905,-33.330,0.299)
N7: (-9.335,-32.168,0.589)
N9: (-7.578,-32.554,1.917)
O5': (-9.187,-30.154,4.784)
O3': (-5.588,-29.833,4.765)
C4: (-17.350,-34.782,5.642)
N3: (-16.977,-35.164,4.385)
OP1: (-10.209,-33.915,9.118)
OP2: (-12.789,-33.889,9.514)
C2: (-15.764,-34.976,3.783)
C1': (-13.510,-34.185,3.979)
C3': (-12.160,-32.413,4.943)
O5': (-11.789,-33.789,7.289)
O4': (-12.489,-34.734,4.759)
C5': (-10.811,-34.061,6.317)
P: (-11.582,-34.297,8.761)
C4': (-11.456,-33.762,4.988)
C2': (-13.241,-32.691,3.930)
O2': (-12.692,-32.440,2.673)
N1: (-14.799,-34.419,4.565)
O4: (-18.498,-34.998,5.996)
O2: (-15.570,-35.292,2.623)
C6: (-15.080,-34.048,5.862)
C5: (-16.293,-34.198,6.421)
O3': (-11.266,-31.553,4.299)
N3: (-16.977,-35.164,4.385)
OP1: (-10.209,-33.915,9.118)
OP2: (-12.789,-33.889,9.514)
C2: (-15.764,-34.976,3.783)
C1': (-13.510,-34.185,3.979)
C3': (-12.160,-32.413,4.943)
O5': (-11.789,-33.789,7.289)
O4': (-12.489,-34.734,4.759)
C5': (-10.811,-34.061,6.317)
P: (-11.582,-34.297,8.761)
C4': (-11.456,-33.762,4.988)
C2': (-13.241,-32.691,3.930)
O2': (-12.692,-32.440,2.673)
N1: (-14.799,-34.419,4.565)
O4: (-18.498,-34.998,5.996)
O2: (-15.570,-35.292,2.623)
C6: (-15.080,-34.048,5.862)
C5: (-16.293,-34.198,6.421)
O3': (-11.266,-31.553,4.299)
Image (generated by PyMOL):