Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21521:21520
Extra
PDB:
ATOM 1 O3' U A1520 -53.839 -88.613 63.748 1.00105.69 O
ATOM 2 P G A1521 -53.746 -87.964 62.292 1.00121.40 P
ATOM 3 OP1 G A1521 -53.318 -89.027 61.352 1.00121.69 O
ATOM 4 OP2 G A1521 -52.906 -86.775 62.433 1.00120.77 O
ATOM 5 O5' G A1521 -55.262 -87.551 61.993 1.00121.20 O
ATOM 6 C5' G A1521 -56.151 -88.457 61.330 1.00121.57 C
ATOM 7 C4' G A1521 -57.616 -88.126 61.562 1.00121.59 C
ATOM 8 O4' G A1521 -58.339 -89.363 61.765 1.00122.37 O
ATOM 9 C3' G A1521 -57.911 -87.266 62.781 1.00121.50 C
ATOM 10 O3' G A1521 -59.113 -86.508 62.574 1.00121.18 O
ATOM 11 C2' G A1521 -58.134 -88.304 63.883 1.00122.38 C
ATOM 12 O2' G A1521 -59.006 -87.895 64.912 1.00122.55 O
ATOM 13 C1' G A1521 -58.687 -89.520 63.130 1.00122.87 C
ATOM 14 N9 G A1521 -58.093 -90.783 63.594 1.00123.63 N
ATOM 15 C8 G A1521 -56.828 -90.869 64.154 1.00123.73 C
ATOM 16 N7 G A1521 -56.455 -92.066 64.504 1.00124.47 N
ATOM 17 C5 G A1521 -57.548 -92.837 64.150 1.00124.88 C
ATOM 18 C6 G A1521 -57.716 -94.232 64.306 1.00125.74 C
ATOM 19 O6 G A1521 -56.910 -95.046 64.790 1.00126.30 O
ATOM 20 N1 G A1521 -58.963 -94.623 63.815 1.00125.92 N
ATOM 21 C2 G A1521 -59.924 -93.783 63.274 1.00125.38 C
ATOM 22 N2 G A1521 -61.070 -94.379 62.870 1.00125.72 N
ATOM 23 N3 G A1521 -59.773 -92.466 63.134 1.00124.59 N
ATOM 24 C4 G A1521 -58.573 -92.072 63.594 1.00124.38 C
ATOM 25 P G A1522 -59.073 -85.045 61.867 1.00100.41 P
ATOM 26 OP1 G A1522 -60.172 -85.029 60.871 1.00100.29 O
ATOM 27 OP2 G A1522 -57.692 -84.808 61.402 1.00100.02 O
ATOM 28 O5' G A1522 -59.411 -84.044 63.055 1.00100.26 O
TER
ATOM 1 O3' C B1519 -49.768 -84.596 64.723 1.00118.76 O
ATOM 2 P U B1520 -49.447 -86.163 64.841 1.00104.53 P
ATOM 3 OP1 U B1520 -48.679 -86.394 66.087 1.00105.01 O
ATOM 4 OP2 U B1520 -48.844 -86.572 63.556 1.00104.38 O
ATOM 5 O5' U B1520 -50.903 -86.786 64.973 1.00104.94 O
ATOM 6 C5' U B1520 -51.093 -88.138 65.332 1.00105.79 C
ATOM 7 C4' U B1520 -52.504 -88.378 65.782 1.00106.11 C
ATOM 8 O4' U B1520 -52.735 -87.719 67.046 1.00106.15 O
ATOM 9 C3' U B1520 -53.593 -87.815 64.890 1.00105.58 C
ATOM 10 O3' U B1520 -53.839 -88.613 63.748 1.00105.69 O
ATOM 11 C2' U B1520 -54.787 -87.714 65.837 1.00105.89 C
ATOM 12 O2' U B1520 -55.461 -88.956 65.938 1.00106.64 O
ATOM 13 C1' U B1520 -54.109 -87.433 67.179 1.00106.11 C
ATOM 14 N1 U B1520 -54.281 -86.039 67.634 1.00105.50 N
ATOM 15 C2 U B1520 -55.546 -85.651 68.016 1.00105.50 C
ATOM 16 O2 U B1520 -56.500 -86.391 67.962 1.00105.97 O
ATOM 17 N3 U B1520 -55.701 -84.370 68.453 1.00104.97 N
ATOM 18 C4 U B1520 -54.695 -83.439 68.550 1.00104.43 C
ATOM 19 O4 U B1520 -54.946 -82.296 68.964 1.00103.98 O
ATOM 20 C5 U B1520 -53.410 -83.926 68.147 1.00104.48 C
ATOM 21 C6 U B1520 -53.237 -85.177 67.720 1.00105.00 C
ATOM 22 P G B1521 -53.746 -87.964 62.292 1.00121.40 P
ATOM 23 OP1 G B1521 -53.318 -89.027 61.352 1.00121.69 O
ATOM 24 OP2 G B1521 -52.906 -86.775 62.433 1.00120.77 O
ATOM 25 O5' G B1521 -55.262 -87.551 61.993 1.00121.20 O
TER
ATOM 2 P G A1521 -53.746 -87.964 62.292 1.00121.40 P
ATOM 3 OP1 G A1521 -53.318 -89.027 61.352 1.00121.69 O
ATOM 4 OP2 G A1521 -52.906 -86.775 62.433 1.00120.77 O
ATOM 5 O5' G A1521 -55.262 -87.551 61.993 1.00121.20 O
ATOM 6 C5' G A1521 -56.151 -88.457 61.330 1.00121.57 C
ATOM 7 C4' G A1521 -57.616 -88.126 61.562 1.00121.59 C
ATOM 8 O4' G A1521 -58.339 -89.363 61.765 1.00122.37 O
ATOM 9 C3' G A1521 -57.911 -87.266 62.781 1.00121.50 C
ATOM 10 O3' G A1521 -59.113 -86.508 62.574 1.00121.18 O
ATOM 11 C2' G A1521 -58.134 -88.304 63.883 1.00122.38 C
ATOM 12 O2' G A1521 -59.006 -87.895 64.912 1.00122.55 O
ATOM 13 C1' G A1521 -58.687 -89.520 63.130 1.00122.87 C
ATOM 14 N9 G A1521 -58.093 -90.783 63.594 1.00123.63 N
ATOM 15 C8 G A1521 -56.828 -90.869 64.154 1.00123.73 C
ATOM 16 N7 G A1521 -56.455 -92.066 64.504 1.00124.47 N
ATOM 17 C5 G A1521 -57.548 -92.837 64.150 1.00124.88 C
ATOM 18 C6 G A1521 -57.716 -94.232 64.306 1.00125.74 C
ATOM 19 O6 G A1521 -56.910 -95.046 64.790 1.00126.30 O
ATOM 20 N1 G A1521 -58.963 -94.623 63.815 1.00125.92 N
ATOM 21 C2 G A1521 -59.924 -93.783 63.274 1.00125.38 C
ATOM 22 N2 G A1521 -61.070 -94.379 62.870 1.00125.72 N
ATOM 23 N3 G A1521 -59.773 -92.466 63.134 1.00124.59 N
ATOM 24 C4 G A1521 -58.573 -92.072 63.594 1.00124.38 C
ATOM 25 P G A1522 -59.073 -85.045 61.867 1.00100.41 P
ATOM 26 OP1 G A1522 -60.172 -85.029 60.871 1.00100.29 O
ATOM 27 OP2 G A1522 -57.692 -84.808 61.402 1.00100.02 O
ATOM 28 O5' G A1522 -59.411 -84.044 63.055 1.00100.26 O
TER
ATOM 1 O3' C B1519 -49.768 -84.596 64.723 1.00118.76 O
ATOM 2 P U B1520 -49.447 -86.163 64.841 1.00104.53 P
ATOM 3 OP1 U B1520 -48.679 -86.394 66.087 1.00105.01 O
ATOM 4 OP2 U B1520 -48.844 -86.572 63.556 1.00104.38 O
ATOM 5 O5' U B1520 -50.903 -86.786 64.973 1.00104.94 O
ATOM 6 C5' U B1520 -51.093 -88.138 65.332 1.00105.79 C
ATOM 7 C4' U B1520 -52.504 -88.378 65.782 1.00106.11 C
ATOM 8 O4' U B1520 -52.735 -87.719 67.046 1.00106.15 O
ATOM 9 C3' U B1520 -53.593 -87.815 64.890 1.00105.58 C
ATOM 10 O3' U B1520 -53.839 -88.613 63.748 1.00105.69 O
ATOM 11 C2' U B1520 -54.787 -87.714 65.837 1.00105.89 C
ATOM 12 O2' U B1520 -55.461 -88.956 65.938 1.00106.64 O
ATOM 13 C1' U B1520 -54.109 -87.433 67.179 1.00106.11 C
ATOM 14 N1 U B1520 -54.281 -86.039 67.634 1.00105.50 N
ATOM 15 C2 U B1520 -55.546 -85.651 68.016 1.00105.50 C
ATOM 16 O2 U B1520 -56.500 -86.391 67.962 1.00105.97 O
ATOM 17 N3 U B1520 -55.701 -84.370 68.453 1.00104.97 N
ATOM 18 C4 U B1520 -54.695 -83.439 68.550 1.00104.43 C
ATOM 19 O4 U B1520 -54.946 -82.296 68.964 1.00103.98 O
ATOM 20 C5 U B1520 -53.410 -83.926 68.147 1.00104.48 C
ATOM 21 C6 U B1520 -53.237 -85.177 67.720 1.00105.00 C
ATOM 22 P G B1521 -53.746 -87.964 62.292 1.00121.40 P
ATOM 23 OP1 G B1521 -53.318 -89.027 61.352 1.00121.69 O
ATOM 24 OP2 G B1521 -52.906 -86.775 62.433 1.00120.77 O
ATOM 25 O5' G B1521 -55.262 -87.551 61.993 1.00121.20 O
TER
Atoms:
OP1: (-53.318,-89.027,61.352)
OP2: (-52.906,-86.775,62.433)
C3': (-57.911,-87.266,62.781)
C1': (-58.687,-89.520,63.130)
C5': (-56.151,-88.457,61.330)
O6: (-56.910,-95.046,64.790)
O4': (-58.339,-89.363,61.765)
C8: (-56.828,-90.869,64.154)
C2: (-59.924,-93.783,63.274)
C6: (-57.716,-94.232,64.306)
C5: (-57.548,-92.837,64.150)
C4: (-58.573,-92.072,63.594)
P: (-53.746,-87.964,62.292)
C4': (-57.616,-88.126,61.562)
C2': (-58.134,-88.304,63.883)
O2': (-59.006,-87.895,64.912)
N1: (-58.963,-94.623,63.815)
N2: (-61.070,-94.379,62.870)
N3: (-59.773,-92.466,63.134)
N7: (-56.455,-92.066,64.504)
N9: (-58.093,-90.783,63.594)
O5': (-55.262,-87.551,61.993)
O3': (-59.113,-86.508,62.574)
OP2: (-52.906,-86.775,62.433)
C3': (-57.911,-87.266,62.781)
C1': (-58.687,-89.520,63.130)
C5': (-56.151,-88.457,61.330)
O6: (-56.910,-95.046,64.790)
O4': (-58.339,-89.363,61.765)
C8: (-56.828,-90.869,64.154)
C2: (-59.924,-93.783,63.274)
C6: (-57.716,-94.232,64.306)
C5: (-57.548,-92.837,64.150)
C4: (-58.573,-92.072,63.594)
P: (-53.746,-87.964,62.292)
C4': (-57.616,-88.126,61.562)
C2': (-58.134,-88.304,63.883)
O2': (-59.006,-87.895,64.912)
N1: (-58.963,-94.623,63.815)
N2: (-61.070,-94.379,62.870)
N3: (-59.773,-92.466,63.134)
N7: (-56.455,-92.066,64.504)
N9: (-58.093,-90.783,63.594)
O5': (-55.262,-87.551,61.993)
O3': (-59.113,-86.508,62.574)
C4: (-54.695,-83.439,68.550)
N3: (-55.701,-84.370,68.453)
OP1: (-48.679,-86.394,66.087)
OP2: (-48.844,-86.572,63.556)
C2: (-55.546,-85.651,68.016)
C1': (-54.109,-87.433,67.179)
C3': (-53.593,-87.815,64.890)
O5': (-50.903,-86.786,64.973)
O4': (-52.735,-87.719,67.046)
C5': (-51.093,-88.138,65.332)
P: (-49.447,-86.163,64.841)
C4': (-52.504,-88.378,65.782)
C2': (-54.787,-87.714,65.837)
O2': (-55.461,-88.956,65.938)
N1: (-54.281,-86.039,67.634)
O4: (-54.946,-82.296,68.964)
O2: (-56.500,-86.391,67.962)
C6: (-53.237,-85.177,67.720)
C5: (-53.410,-83.926,68.147)
O3': (-53.839,-88.613,63.748)
N3: (-55.701,-84.370,68.453)
OP1: (-48.679,-86.394,66.087)
OP2: (-48.844,-86.572,63.556)
C2: (-55.546,-85.651,68.016)
C1': (-54.109,-87.433,67.179)
C3': (-53.593,-87.815,64.890)
O5': (-50.903,-86.786,64.973)
O4': (-52.735,-87.719,67.046)
C5': (-51.093,-88.138,65.332)
P: (-49.447,-86.163,64.841)
C4': (-52.504,-88.378,65.782)
C2': (-54.787,-87.714,65.837)
O2': (-55.461,-88.956,65.938)
N1: (-54.281,-86.039,67.634)
O4: (-54.946,-82.296,68.964)
O2: (-56.500,-86.391,67.962)
C6: (-53.237,-85.177,67.720)
C5: (-53.410,-83.926,68.147)
O3': (-53.839,-88.613,63.748)
Image (generated by PyMOL):