Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1562:A1561
Extra
PDB:
ATOM 1 O3' U A1561 37.887 -44.025 -14.753 1.00 33.72 O
ATOM 2 P G A1562 37.915 -42.882 -13.627 1.00 42.97 P
ATOM 3 OP1 G A1562 39.263 -42.256 -13.672 1.00 36.53 O
ATOM 4 OP2 G A1562 37.441 -43.495 -12.346 1.00 30.02 O
ATOM 5 O5' G A1562 36.831 -41.857 -14.158 1.00 45.21 O
ATOM 6 C5' G A1562 37.201 -40.742 -14.944 1.00 33.56 C
ATOM 7 C4' G A1562 36.056 -40.312 -15.805 1.00 39.95 C
ATOM 8 O4' G A1562 35.730 -41.378 -16.731 1.00 47.22 O
ATOM 9 C3' G A1562 34.747 -40.059 -15.078 1.00 33.54 C
ATOM 10 O3' G A1562 34.693 -38.781 -14.486 1.00 38.14 O
ATOM 11 C2' G A1562 33.724 -40.266 -16.180 1.00 37.28 C
ATOM 12 O2' G A1562 33.713 -39.163 -17.062 1.00 45.44 O
ATOM 13 C1' G A1562 34.338 -41.432 -16.929 1.00 35.13 C
ATOM 14 N9 G A1562 33.845 -42.724 -16.441 1.00 33.10 N
ATOM 15 C8 G A1562 34.544 -43.680 -15.759 1.00 32.75 C
ATOM 16 N7 G A1562 33.808 -44.731 -15.491 1.00 40.03 N
ATOM 17 C5 G A1562 32.554 -44.455 -16.041 1.00 40.29 C
ATOM 18 C6 G A1562 31.339 -45.206 -16.078 1.00 37.77 C
ATOM 19 O6 G A1562 31.072 -46.329 -15.629 1.00 40.52 O
ATOM 20 N1 G A1562 30.338 -44.523 -16.734 1.00 38.02 N
ATOM 21 C2 G A1562 30.479 -43.281 -17.293 1.00 40.51 C
ATOM 22 N2 G A1562 29.404 -42.754 -17.906 1.00 46.10 N
ATOM 23 N3 G A1562 31.589 -42.586 -17.262 1.00 38.21 N
ATOM 24 C4 G A1562 32.579 -43.220 -16.629 1.00 34.88 C
ATOM 25 P G A1563 33.781 -38.522 -13.202 1.00 43.31 P
ATOM 26 OP1 G A1563 34.039 -37.120 -12.754 1.00 41.49 O
ATOM 27 OP2 G A1563 34.025 -39.630 -12.249 1.00 36.69 O
ATOM 28 O5' G A1563 32.322 -38.639 -13.801 1.00 35.70 O
TER
ATOM 1 O3' G B1560 43.186 -45.938 -12.199 1.00 33.69 O
ATOM 2 P U B1561 41.875 -45.215 -11.618 1.00 28.40 P
ATOM 3 OP1 U B1561 42.131 -43.757 -11.625 1.00 43.33 O
ATOM 4 OP2 U B1561 41.549 -45.878 -10.334 1.00 32.68 O
ATOM 5 O5' U B1561 40.784 -45.572 -12.706 1.00 32.49 O
ATOM 6 C5' U B1561 40.840 -44.980 -13.984 1.00 29.24 C
ATOM 7 C4' U B1561 39.796 -45.540 -14.885 1.00 25.66 C
ATOM 8 O4' U B1561 39.919 -46.966 -14.919 1.00 30.23 O
ATOM 9 C3' U B1561 38.359 -45.326 -14.462 1.00 26.77 C
ATOM 10 O3' U B1561 37.887 -44.025 -14.753 1.00 33.72 O
ATOM 11 C2' U B1561 37.660 -46.394 -15.260 1.00 29.40 C
ATOM 12 O2' U B1561 37.620 -46.000 -16.623 1.00 32.47 O
ATOM 13 C1' U B1561 38.656 -47.537 -15.146 1.00 31.13 C
ATOM 14 N1 U B1561 38.359 -48.472 -14.046 1.00 29.65 N
ATOM 15 C2 U B1561 37.537 -49.528 -14.308 1.00 31.71 C
ATOM 16 O2 U B1561 37.001 -49.681 -15.392 1.00 35.65 O
ATOM 17 N3 U B1561 37.337 -50.378 -13.251 1.00 35.21 N
ATOM 18 C4 U B1561 37.893 -50.309 -11.992 1.00 31.14 C
ATOM 19 O4 U B1561 37.647 -51.163 -11.122 1.00 27.00 O
ATOM 20 C5 U B1561 38.753 -49.186 -11.837 1.00 31.81 C
ATOM 21 C6 U B1561 38.965 -48.338 -12.837 1.00 30.34 C
ATOM 22 P G B1562 37.915 -42.882 -13.627 1.00 42.97 P
ATOM 23 OP1 G B1562 39.263 -42.256 -13.672 1.00 36.53 O
ATOM 24 OP2 G B1562 37.441 -43.495 -12.346 1.00 30.02 O
ATOM 25 O5' G B1562 36.831 -41.857 -14.158 1.00 45.21 O
TER
ATOM 2 P G A1562 37.915 -42.882 -13.627 1.00 42.97 P
ATOM 3 OP1 G A1562 39.263 -42.256 -13.672 1.00 36.53 O
ATOM 4 OP2 G A1562 37.441 -43.495 -12.346 1.00 30.02 O
ATOM 5 O5' G A1562 36.831 -41.857 -14.158 1.00 45.21 O
ATOM 6 C5' G A1562 37.201 -40.742 -14.944 1.00 33.56 C
ATOM 7 C4' G A1562 36.056 -40.312 -15.805 1.00 39.95 C
ATOM 8 O4' G A1562 35.730 -41.378 -16.731 1.00 47.22 O
ATOM 9 C3' G A1562 34.747 -40.059 -15.078 1.00 33.54 C
ATOM 10 O3' G A1562 34.693 -38.781 -14.486 1.00 38.14 O
ATOM 11 C2' G A1562 33.724 -40.266 -16.180 1.00 37.28 C
ATOM 12 O2' G A1562 33.713 -39.163 -17.062 1.00 45.44 O
ATOM 13 C1' G A1562 34.338 -41.432 -16.929 1.00 35.13 C
ATOM 14 N9 G A1562 33.845 -42.724 -16.441 1.00 33.10 N
ATOM 15 C8 G A1562 34.544 -43.680 -15.759 1.00 32.75 C
ATOM 16 N7 G A1562 33.808 -44.731 -15.491 1.00 40.03 N
ATOM 17 C5 G A1562 32.554 -44.455 -16.041 1.00 40.29 C
ATOM 18 C6 G A1562 31.339 -45.206 -16.078 1.00 37.77 C
ATOM 19 O6 G A1562 31.072 -46.329 -15.629 1.00 40.52 O
ATOM 20 N1 G A1562 30.338 -44.523 -16.734 1.00 38.02 N
ATOM 21 C2 G A1562 30.479 -43.281 -17.293 1.00 40.51 C
ATOM 22 N2 G A1562 29.404 -42.754 -17.906 1.00 46.10 N
ATOM 23 N3 G A1562 31.589 -42.586 -17.262 1.00 38.21 N
ATOM 24 C4 G A1562 32.579 -43.220 -16.629 1.00 34.88 C
ATOM 25 P G A1563 33.781 -38.522 -13.202 1.00 43.31 P
ATOM 26 OP1 G A1563 34.039 -37.120 -12.754 1.00 41.49 O
ATOM 27 OP2 G A1563 34.025 -39.630 -12.249 1.00 36.69 O
ATOM 28 O5' G A1563 32.322 -38.639 -13.801 1.00 35.70 O
TER
ATOM 1 O3' G B1560 43.186 -45.938 -12.199 1.00 33.69 O
ATOM 2 P U B1561 41.875 -45.215 -11.618 1.00 28.40 P
ATOM 3 OP1 U B1561 42.131 -43.757 -11.625 1.00 43.33 O
ATOM 4 OP2 U B1561 41.549 -45.878 -10.334 1.00 32.68 O
ATOM 5 O5' U B1561 40.784 -45.572 -12.706 1.00 32.49 O
ATOM 6 C5' U B1561 40.840 -44.980 -13.984 1.00 29.24 C
ATOM 7 C4' U B1561 39.796 -45.540 -14.885 1.00 25.66 C
ATOM 8 O4' U B1561 39.919 -46.966 -14.919 1.00 30.23 O
ATOM 9 C3' U B1561 38.359 -45.326 -14.462 1.00 26.77 C
ATOM 10 O3' U B1561 37.887 -44.025 -14.753 1.00 33.72 O
ATOM 11 C2' U B1561 37.660 -46.394 -15.260 1.00 29.40 C
ATOM 12 O2' U B1561 37.620 -46.000 -16.623 1.00 32.47 O
ATOM 13 C1' U B1561 38.656 -47.537 -15.146 1.00 31.13 C
ATOM 14 N1 U B1561 38.359 -48.472 -14.046 1.00 29.65 N
ATOM 15 C2 U B1561 37.537 -49.528 -14.308 1.00 31.71 C
ATOM 16 O2 U B1561 37.001 -49.681 -15.392 1.00 35.65 O
ATOM 17 N3 U B1561 37.337 -50.378 -13.251 1.00 35.21 N
ATOM 18 C4 U B1561 37.893 -50.309 -11.992 1.00 31.14 C
ATOM 19 O4 U B1561 37.647 -51.163 -11.122 1.00 27.00 O
ATOM 20 C5 U B1561 38.753 -49.186 -11.837 1.00 31.81 C
ATOM 21 C6 U B1561 38.965 -48.338 -12.837 1.00 30.34 C
ATOM 22 P G B1562 37.915 -42.882 -13.627 1.00 42.97 P
ATOM 23 OP1 G B1562 39.263 -42.256 -13.672 1.00 36.53 O
ATOM 24 OP2 G B1562 37.441 -43.495 -12.346 1.00 30.02 O
ATOM 25 O5' G B1562 36.831 -41.857 -14.158 1.00 45.21 O
TER
Atoms:
OP1: (39.263,-42.256,-13.672)
OP2: (37.441,-43.495,-12.346)
C3': (34.747,-40.059,-15.078)
C1': (34.338,-41.432,-16.929)
C5': (37.201,-40.742,-14.944)
O6: (31.072,-46.329,-15.629)
O4': (35.730,-41.378,-16.731)
C8: (34.544,-43.680,-15.759)
C2: (30.479,-43.281,-17.293)
C6: (31.339,-45.206,-16.078)
C5: (32.554,-44.455,-16.041)
C4: (32.579,-43.220,-16.629)
P: (37.915,-42.882,-13.627)
C4': (36.056,-40.312,-15.805)
C2': (33.724,-40.266,-16.180)
O2': (33.713,-39.163,-17.062)
N1: (30.338,-44.523,-16.734)
N2: (29.404,-42.754,-17.906)
N3: (31.589,-42.586,-17.262)
N7: (33.808,-44.731,-15.491)
N9: (33.845,-42.724,-16.441)
O5': (36.831,-41.857,-14.158)
O3': (34.693,-38.781,-14.486)
OP2: (37.441,-43.495,-12.346)
C3': (34.747,-40.059,-15.078)
C1': (34.338,-41.432,-16.929)
C5': (37.201,-40.742,-14.944)
O6: (31.072,-46.329,-15.629)
O4': (35.730,-41.378,-16.731)
C8: (34.544,-43.680,-15.759)
C2: (30.479,-43.281,-17.293)
C6: (31.339,-45.206,-16.078)
C5: (32.554,-44.455,-16.041)
C4: (32.579,-43.220,-16.629)
P: (37.915,-42.882,-13.627)
C4': (36.056,-40.312,-15.805)
C2': (33.724,-40.266,-16.180)
O2': (33.713,-39.163,-17.062)
N1: (30.338,-44.523,-16.734)
N2: (29.404,-42.754,-17.906)
N3: (31.589,-42.586,-17.262)
N7: (33.808,-44.731,-15.491)
N9: (33.845,-42.724,-16.441)
O5': (36.831,-41.857,-14.158)
O3': (34.693,-38.781,-14.486)
C4: (37.893,-50.309,-11.992)
N3: (37.337,-50.378,-13.251)
OP1: (42.131,-43.757,-11.625)
OP2: (41.549,-45.878,-10.334)
C2: (37.537,-49.528,-14.308)
C1': (38.656,-47.537,-15.146)
C3': (38.359,-45.326,-14.462)
O5': (40.784,-45.572,-12.706)
O4': (39.919,-46.966,-14.919)
C5': (40.840,-44.980,-13.984)
P: (41.875,-45.215,-11.618)
C4': (39.796,-45.540,-14.885)
C2': (37.660,-46.394,-15.260)
O2': (37.620,-46.000,-16.623)
N1: (38.359,-48.472,-14.046)
O4: (37.647,-51.163,-11.122)
O2: (37.001,-49.681,-15.392)
C6: (38.965,-48.338,-12.837)
C5: (38.753,-49.186,-11.837)
O3': (37.887,-44.025,-14.753)
N3: (37.337,-50.378,-13.251)
OP1: (42.131,-43.757,-11.625)
OP2: (41.549,-45.878,-10.334)
C2: (37.537,-49.528,-14.308)
C1': (38.656,-47.537,-15.146)
C3': (38.359,-45.326,-14.462)
O5': (40.784,-45.572,-12.706)
O4': (39.919,-46.966,-14.919)
C5': (40.840,-44.980,-13.984)
P: (41.875,-45.215,-11.618)
C4': (39.796,-45.540,-14.885)
C2': (37.660,-46.394,-15.260)
O2': (37.620,-46.000,-16.623)
N1: (38.359,-48.472,-14.046)
O4: (37.647,-51.163,-11.122)
O2: (37.001,-49.681,-15.392)
C6: (38.965,-48.338,-12.837)
C5: (38.753,-49.186,-11.837)
O3': (37.887,-44.025,-14.753)
Image (generated by PyMOL):