Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1225:A1224
Extra
PDB:
ATOM 1 O3' U A1224 -37.797 153.736 225.756 1.00 11.37 O
ATOM 2 P G A1225 -36.230 153.716 225.483 1.00 13.99 P
ATOM 3 OP1 G A1225 -35.582 154.302 226.685 1.00 13.99 O
ATOM 4 OP2 G A1225 -35.997 154.367 224.152 1.00 13.99 O
ATOM 5 O5' G A1225 -35.926 152.140 225.391 1.00 13.99 O
ATOM 6 C5' G A1225 -36.544 151.229 226.294 1.00 13.99 C
ATOM 7 C4' G A1225 -36.252 149.794 225.936 1.00 13.99 C
ATOM 8 O4' G A1225 -37.211 149.331 224.951 1.00 13.99 O
ATOM 9 C3' G A1225 -34.898 149.525 225.296 1.00 13.99 C
ATOM 10 O3' G A1225 -33.853 149.412 226.223 1.00 13.99 O
ATOM 11 C2' G A1225 -35.131 148.251 224.506 1.00 13.99 C
ATOM 12 O2' G A1225 -35.043 147.104 225.345 1.00 13.99 O
ATOM 13 C1' G A1225 -36.580 148.441 224.040 1.00 13.99 C
ATOM 14 N9 G A1225 -36.650 149.036 222.683 1.00 13.94 N
ATOM 15 C8 G A1225 -37.212 150.254 222.395 1.00 13.94 C
ATOM 16 N7 G A1225 -37.166 150.576 221.129 1.00 13.94 N
ATOM 17 C5 G A1225 -36.515 149.508 220.536 1.00 13.94 C
ATOM 18 C6 G A1225 -36.187 149.306 219.181 1.00 13.94 C
ATOM 19 O6 G A1225 -36.386 150.047 218.217 1.00 13.94 O
ATOM 20 N1 G A1225 -35.552 148.111 219.002 1.00 13.94 N
ATOM 21 C2 G A1225 -35.278 147.237 219.998 1.00 13.94 C
ATOM 22 N2 G A1225 -34.655 146.126 219.636 1.00 13.94 N
ATOM 23 N3 G A1225 -35.578 147.397 221.261 1.00 13.94 N
ATOM 24 C4 G A1225 -36.194 148.557 221.473 1.00 13.94 C
ATOM 25 P C A1226 -32.428 150.035 225.867 1.00 4.93 P
ATOM 26 OP1 C A1226 -31.573 149.909 227.069 1.00 4.93 O
ATOM 27 OP2 C A1226 -32.684 151.388 225.293 1.00 4.93 O
ATOM 28 O5' C A1226 -31.895 149.070 224.742 1.00 4.93 O
TER
ATOM 1 O3' A B1223 -41.883 158.202 223.727 1.00 11.57 O
ATOM 2 P U B1224 -40.297 158.259 223.742 1.00 11.37 P
ATOM 3 OP1 U B1224 -39.895 158.975 224.983 1.00 11.37 O
ATOM 4 OP2 U B1224 -39.865 158.807 222.426 1.00 11.37 O
ATOM 5 O5' U B1224 -39.901 156.732 223.870 1.00 11.37 O
ATOM 6 C5' U B1224 -39.713 156.168 225.143 1.00 11.37 C
ATOM 7 C4' U B1224 -39.886 154.699 225.096 1.00 11.37 C
ATOM 8 O4' U B1224 -40.851 154.375 224.086 1.00 11.37 O
ATOM 9 C3' U B1224 -38.669 153.932 224.693 1.00 11.37 C
ATOM 10 O3' U B1224 -37.797 153.736 225.756 1.00 11.37 O
ATOM 11 C2' U B1224 -39.240 152.650 224.130 1.00 11.37 C
ATOM 12 O2' U B1224 -39.598 151.751 225.163 1.00 11.37 O
ATOM 13 C1' U B1224 -40.500 153.171 223.455 1.00 11.37 C
ATOM 14 N1 U B1224 -40.280 153.462 222.021 1.00 12.52 N
ATOM 15 C2 U B1224 -40.303 152.381 221.161 1.00 12.52 C
ATOM 16 O2 U B1224 -40.485 151.243 221.541 1.00 12.52 O
ATOM 17 N3 U B1224 -40.110 152.686 219.856 1.00 12.52 N
ATOM 18 C4 U B1224 -39.907 153.929 219.332 1.00 12.52 C
ATOM 19 O4 U B1224 -39.750 153.985 218.120 1.00 12.52 O
ATOM 20 C5 U B1224 -39.892 155.021 220.265 1.00 12.52 C
ATOM 21 C6 U B1224 -40.077 154.758 221.564 1.00 12.52 C
ATOM 22 P G B1225 -36.230 153.716 225.483 1.00 13.99 P
ATOM 23 OP1 G B1225 -35.582 154.302 226.685 1.00 13.99 O
ATOM 24 OP2 G B1225 -35.997 154.367 224.152 1.00 13.99 O
ATOM 25 O5' G B1225 -35.926 152.140 225.391 1.00 13.99 O
TER
ATOM 2 P G A1225 -36.230 153.716 225.483 1.00 13.99 P
ATOM 3 OP1 G A1225 -35.582 154.302 226.685 1.00 13.99 O
ATOM 4 OP2 G A1225 -35.997 154.367 224.152 1.00 13.99 O
ATOM 5 O5' G A1225 -35.926 152.140 225.391 1.00 13.99 O
ATOM 6 C5' G A1225 -36.544 151.229 226.294 1.00 13.99 C
ATOM 7 C4' G A1225 -36.252 149.794 225.936 1.00 13.99 C
ATOM 8 O4' G A1225 -37.211 149.331 224.951 1.00 13.99 O
ATOM 9 C3' G A1225 -34.898 149.525 225.296 1.00 13.99 C
ATOM 10 O3' G A1225 -33.853 149.412 226.223 1.00 13.99 O
ATOM 11 C2' G A1225 -35.131 148.251 224.506 1.00 13.99 C
ATOM 12 O2' G A1225 -35.043 147.104 225.345 1.00 13.99 O
ATOM 13 C1' G A1225 -36.580 148.441 224.040 1.00 13.99 C
ATOM 14 N9 G A1225 -36.650 149.036 222.683 1.00 13.94 N
ATOM 15 C8 G A1225 -37.212 150.254 222.395 1.00 13.94 C
ATOM 16 N7 G A1225 -37.166 150.576 221.129 1.00 13.94 N
ATOM 17 C5 G A1225 -36.515 149.508 220.536 1.00 13.94 C
ATOM 18 C6 G A1225 -36.187 149.306 219.181 1.00 13.94 C
ATOM 19 O6 G A1225 -36.386 150.047 218.217 1.00 13.94 O
ATOM 20 N1 G A1225 -35.552 148.111 219.002 1.00 13.94 N
ATOM 21 C2 G A1225 -35.278 147.237 219.998 1.00 13.94 C
ATOM 22 N2 G A1225 -34.655 146.126 219.636 1.00 13.94 N
ATOM 23 N3 G A1225 -35.578 147.397 221.261 1.00 13.94 N
ATOM 24 C4 G A1225 -36.194 148.557 221.473 1.00 13.94 C
ATOM 25 P C A1226 -32.428 150.035 225.867 1.00 4.93 P
ATOM 26 OP1 C A1226 -31.573 149.909 227.069 1.00 4.93 O
ATOM 27 OP2 C A1226 -32.684 151.388 225.293 1.00 4.93 O
ATOM 28 O5' C A1226 -31.895 149.070 224.742 1.00 4.93 O
TER
ATOM 1 O3' A B1223 -41.883 158.202 223.727 1.00 11.57 O
ATOM 2 P U B1224 -40.297 158.259 223.742 1.00 11.37 P
ATOM 3 OP1 U B1224 -39.895 158.975 224.983 1.00 11.37 O
ATOM 4 OP2 U B1224 -39.865 158.807 222.426 1.00 11.37 O
ATOM 5 O5' U B1224 -39.901 156.732 223.870 1.00 11.37 O
ATOM 6 C5' U B1224 -39.713 156.168 225.143 1.00 11.37 C
ATOM 7 C4' U B1224 -39.886 154.699 225.096 1.00 11.37 C
ATOM 8 O4' U B1224 -40.851 154.375 224.086 1.00 11.37 O
ATOM 9 C3' U B1224 -38.669 153.932 224.693 1.00 11.37 C
ATOM 10 O3' U B1224 -37.797 153.736 225.756 1.00 11.37 O
ATOM 11 C2' U B1224 -39.240 152.650 224.130 1.00 11.37 C
ATOM 12 O2' U B1224 -39.598 151.751 225.163 1.00 11.37 O
ATOM 13 C1' U B1224 -40.500 153.171 223.455 1.00 11.37 C
ATOM 14 N1 U B1224 -40.280 153.462 222.021 1.00 12.52 N
ATOM 15 C2 U B1224 -40.303 152.381 221.161 1.00 12.52 C
ATOM 16 O2 U B1224 -40.485 151.243 221.541 1.00 12.52 O
ATOM 17 N3 U B1224 -40.110 152.686 219.856 1.00 12.52 N
ATOM 18 C4 U B1224 -39.907 153.929 219.332 1.00 12.52 C
ATOM 19 O4 U B1224 -39.750 153.985 218.120 1.00 12.52 O
ATOM 20 C5 U B1224 -39.892 155.021 220.265 1.00 12.52 C
ATOM 21 C6 U B1224 -40.077 154.758 221.564 1.00 12.52 C
ATOM 22 P G B1225 -36.230 153.716 225.483 1.00 13.99 P
ATOM 23 OP1 G B1225 -35.582 154.302 226.685 1.00 13.99 O
ATOM 24 OP2 G B1225 -35.997 154.367 224.152 1.00 13.99 O
ATOM 25 O5' G B1225 -35.926 152.140 225.391 1.00 13.99 O
TER
Atoms:
OP1: (-35.582,154.302,226.685)
OP2: (-35.997,154.367,224.152)
C3': (-34.898,149.525,225.296)
C1': (-36.580,148.441,224.040)
C5': (-36.544,151.229,226.294)
O6: (-36.386,150.047,218.217)
O4': (-37.211,149.331,224.951)
C8: (-37.212,150.254,222.395)
C2: (-35.278,147.237,219.998)
C6: (-36.187,149.306,219.181)
C5: (-36.515,149.508,220.536)
C4: (-36.194,148.557,221.473)
P: (-36.230,153.716,225.483)
C4': (-36.252,149.794,225.936)
C2': (-35.131,148.251,224.506)
O2': (-35.043,147.104,225.345)
N1: (-35.552,148.111,219.002)
N2: (-34.655,146.126,219.636)
N3: (-35.578,147.397,221.261)
N7: (-37.166,150.576,221.129)
N9: (-36.650,149.036,222.683)
O5': (-35.926,152.140,225.391)
O3': (-33.853,149.412,226.223)
OP2: (-35.997,154.367,224.152)
C3': (-34.898,149.525,225.296)
C1': (-36.580,148.441,224.040)
C5': (-36.544,151.229,226.294)
O6: (-36.386,150.047,218.217)
O4': (-37.211,149.331,224.951)
C8: (-37.212,150.254,222.395)
C2: (-35.278,147.237,219.998)
C6: (-36.187,149.306,219.181)
C5: (-36.515,149.508,220.536)
C4: (-36.194,148.557,221.473)
P: (-36.230,153.716,225.483)
C4': (-36.252,149.794,225.936)
C2': (-35.131,148.251,224.506)
O2': (-35.043,147.104,225.345)
N1: (-35.552,148.111,219.002)
N2: (-34.655,146.126,219.636)
N3: (-35.578,147.397,221.261)
N7: (-37.166,150.576,221.129)
N9: (-36.650,149.036,222.683)
O5': (-35.926,152.140,225.391)
O3': (-33.853,149.412,226.223)
C4: (-39.907,153.929,219.332)
N3: (-40.110,152.686,219.856)
OP1: (-39.895,158.975,224.983)
OP2: (-39.865,158.807,222.426)
C2: (-40.303,152.381,221.161)
C1': (-40.500,153.171,223.455)
C3': (-38.669,153.932,224.693)
O5': (-39.901,156.732,223.870)
O4': (-40.851,154.375,224.086)
C5': (-39.713,156.168,225.143)
P: (-40.297,158.259,223.742)
C4': (-39.886,154.699,225.096)
C2': (-39.240,152.650,224.130)
O2': (-39.598,151.751,225.163)
N1: (-40.280,153.462,222.021)
O4: (-39.750,153.985,218.120)
O2: (-40.485,151.243,221.541)
C6: (-40.077,154.758,221.564)
C5: (-39.892,155.021,220.265)
O3': (-37.797,153.736,225.756)
N3: (-40.110,152.686,219.856)
OP1: (-39.895,158.975,224.983)
OP2: (-39.865,158.807,222.426)
C2: (-40.303,152.381,221.161)
C1': (-40.500,153.171,223.455)
C3': (-38.669,153.932,224.693)
O5': (-39.901,156.732,223.870)
O4': (-40.851,154.375,224.086)
C5': (-39.713,156.168,225.143)
P: (-40.297,158.259,223.742)
C4': (-39.886,154.699,225.096)
C2': (-39.240,152.650,224.130)
O2': (-39.598,151.751,225.163)
N1: (-40.280,153.462,222.021)
O4: (-39.750,153.985,218.120)
O2: (-40.485,151.243,221.541)
C6: (-40.077,154.758,221.564)
C5: (-39.892,155.021,220.265)
O3': (-37.797,153.736,225.756)
Image (generated by PyMOL):