ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A651:A650

Extra

PDB:
ATOM 1 O3' U A 650 -1.967 146.584 81.728 1.00 16.26 O
ATOM 2 P G A 651 -3.377 147.309 82.015 1.00 42.31 P
ATOM 3 OP1 G A 651 -3.158 148.765 81.890 1.00 66.98 O
ATOM 4 OP2 G A 651 -3.907 146.756 83.289 1.00 65.44 O
ATOM 5 O5' G A 651 -4.331 146.843 80.817 1.00 9.38 O
ATOM 6 C5' G A 651 -4.130 147.317 79.459 1.00 5.65 C
ATOM 7 C4' G A 651 -5.293 146.909 78.571 1.00 3.55 C
ATOM 8 O4' G A 651 -5.306 145.472 78.381 1.00 3.24 O
ATOM 9 C3' G A 651 -6.668 147.254 79.113 1.00 3.61 C
ATOM 10 O3' G A 651 -7.017 148.574 78.732 1.00 3.67 O
ATOM 11 C2' G A 651 -7.582 146.200 78.480 1.00 2.64 C
ATOM 12 O2' G A 651 -8.083 146.566 77.202 1.00 2.64 O
ATOM 13 C1' G A 651 -6.646 144.991 78.367 1.00 2.64 C
ATOM 14 N9 G A 651 -6.766 143.986 79.425 1.00 24.55 N
ATOM 15 C8 G A 651 -5.948 143.875 80.522 1.00 22.99 C
ATOM 16 N7 G A 651 -6.249 142.864 81.291 1.00 21.95 N
ATOM 17 C5 G A 651 -7.342 142.275 80.676 1.00 21.97 C
ATOM 18 C6 G A 651 -8.088 141.152 81.057 1.00 23.07 C
ATOM 19 O6 G A 651 -7.950 140.451 82.055 1.00 22.43 O
ATOM 20 N1 G A 651 -9.091 140.869 80.147 1.00 21.71 N
ATOM 21 C2 G A 651 -9.356 141.596 79.025 1.00 23.04 C
ATOM 22 N2 G A 651 -10.376 141.158 78.285 1.00 22.53 N
ATOM 23 N3 G A 651 -8.677 142.673 78.659 1.00 23.51 N
ATOM 24 C4 G A 651 -7.683 142.951 79.524 1.00 23.10 C
ATOM 25 P G A 652 -8.134 149.365 79.556 1.00 44.12 P
ATOM 26 OP1 G A 652 -8.053 150.779 79.115 1.00 69.07 O
ATOM 27 OP2 G A 652 -7.978 149.044 80.990 1.00 66.27 O
ATOM 28 O5' G A 652 -9.498 148.732 79.029 1.00 1.55 O
TER

ATOM 1 O3' G B 649 2.045 143.842 85.804 1.00 28.15 O
ATOM 2 P U B 650 0.690 144.731 85.805 1.00 27.50 P
ATOM 3 OP1 U B 650 1.126 146.150 85.874 1.00 40.01 O
ATOM 4 OP2 U B 650 -0.249 144.212 86.830 1.00 37.17 O
ATOM 5 O5' U B 650 0.029 144.473 84.377 1.00 13.92 O
ATOM 6 C5' U B 650 0.550 145.116 83.204 1.00 13.92 C
ATOM 7 C4' U B 650 -0.315 144.817 82.006 1.00 13.92 C
ATOM 8 O4' U B 650 -0.339 143.387 81.772 1.00 14.49 O
ATOM 9 C3' U B 650 -1.783 145.213 82.088 1.00 14.72 C
ATOM 10 O3' U B 650 -1.967 146.584 81.728 1.00 16.26 O
ATOM 11 C2' U B 650 -2.428 144.290 81.060 1.00 14.96 C
ATOM 12 O2' U B 650 -2.301 144.798 79.741 1.00 15.72 O
ATOM 13 C1' U B 650 -1.578 143.023 81.190 1.00 13.92 C
ATOM 14 N1 U B 650 -2.204 141.960 81.995 1.00 42.37 N
ATOM 15 C2 U B 650 -3.301 141.314 81.451 1.00 42.92 C
ATOM 16 O2 U B 650 -3.749 141.579 80.350 1.00 42.22 O
ATOM 17 N3 U B 650 -3.855 140.343 82.242 1.00 43.41 N
ATOM 18 C4 U B 650 -3.438 139.951 83.495 1.00 44.03 C
ATOM 19 O4 U B 650 -4.085 139.089 84.107 1.00 45.30 O
ATOM 20 C5 U B 650 -2.290 140.658 83.986 1.00 43.48 C
ATOM 21 C6 U B 650 -1.729 141.614 83.239 1.00 42.56 C
ATOM 22 P G B 651 -3.377 147.309 82.015 1.00 42.31 P
ATOM 23 OP1 G B 651 -3.158 148.765 81.890 1.00 66.98 O
ATOM 24 OP2 G B 651 -3.907 146.756 83.289 1.00 65.44 O
ATOM 25 O5' G B 651 -4.331 146.843 80.817 1.00 9.38 O
TER

Atoms:
OP1: (-3.158,148.765,81.890)
OP2: (-3.907,146.756,83.289)
C3': (-6.668,147.254,79.113)
C1': (-6.646,144.991,78.367)
C5': (-4.130,147.317,79.459)
O6: (-7.950,140.451,82.055)
O4': (-5.306,145.472,78.381)
C8: (-5.948,143.875,80.522)
C2: (-9.356,141.596,79.025)
C6: (-8.088,141.152,81.057)
C5: (-7.342,142.275,80.676)
C4: (-7.683,142.951,79.524)
P: (-3.377,147.309,82.015)
C4': (-5.293,146.909,78.571)
C2': (-7.582,146.200,78.480)
O2': (-8.083,146.566,77.202)
N1: (-9.091,140.869,80.147)
N2: (-10.376,141.158,78.285)
N3: (-8.677,142.673,78.659)
N7: (-6.249,142.864,81.291)
N9: (-6.766,143.986,79.425)
O5': (-4.331,146.843,80.817)
O3': (-7.017,148.574,78.732)
C4: (-3.438,139.951,83.495)
N3: (-3.855,140.343,82.242)
OP1: (1.126,146.150,85.874)
OP2: (-0.249,144.212,86.830)
C2: (-3.301,141.314,81.451)
C1': (-1.578,143.023,81.190)
C3': (-1.783,145.213,82.088)
O5': (0.029,144.473,84.377)
O4': (-0.339,143.387,81.772)
C5': (0.550,145.116,83.204)
P: (0.690,144.731,85.805)
C4': (-0.315,144.817,82.006)
C2': (-2.428,144.290,81.060)
O2': (-2.301,144.798,79.741)
N1: (-2.204,141.960,81.995)
O4: (-4.085,139.089,84.107)
O2: (-3.749,141.579,80.350)
C6: (-1.729,141.614,83.239)
C5: (-2.290,140.658,83.986)
O3': (-1.967,146.584,81.728)
Image (generated by PyMOL):
PyMOL image
show in jmol