Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1828:A1827
Extra
PDB:
ATOM 1 O3' U A1827 -74.858 -3.504 8.554 1.00 0.82 O
ATOM 2 P G A1828 -75.408 -2.733 9.876 1.00 16.84 P
ATOM 3 OP1 G A1828 -74.328 -1.804 10.346 1.00 16.84 O
ATOM 4 OP2 G A1828 -75.937 -3.763 10.818 1.00 16.84 O
ATOM 5 O5' G A1828 -76.627 -1.904 9.297 1.00 16.84 O
ATOM 6 C5' G A1828 -76.645 -1.493 7.947 1.00 16.84 C
ATOM 7 C4' G A1828 -78.052 -1.407 7.422 1.00 16.84 C
ATOM 8 O4' G A1828 -78.226 -2.370 6.345 1.00 16.84 O
ATOM 9 C3' G A1828 -79.158 -1.727 8.423 1.00 16.84 C
ATOM 10 O3' G A1828 -79.569 -0.592 9.166 1.00 16.84 O
ATOM 11 C2' G A1828 -80.236 -2.271 7.528 1.00 16.84 C
ATOM 12 O2' G A1828 -80.847 -1.213 6.817 1.00 16.84 O
ATOM 13 C1' G A1828 -79.401 -3.088 6.543 1.00 16.84 C
ATOM 14 N9 G A1828 -79.029 -4.410 7.097 1.00 16.72 N
ATOM 15 C8 G A1828 -77.790 -4.760 7.540 1.00 16.72 C
ATOM 16 N7 G A1828 -77.757 -5.974 7.983 1.00 16.72 N
ATOM 17 C5 G A1828 -79.040 -6.454 7.838 1.00 16.72 C
ATOM 18 C6 G A1828 -79.605 -7.704 8.151 1.00 16.72 C
ATOM 19 O6 G A1828 -78.989 -8.629 8.651 1.00 16.72 O
ATOM 20 N1 G A1828 -80.965 -7.820 7.855 1.00 16.72 N
ATOM 21 C2 G A1828 -81.707 -6.809 7.291 1.00 16.72 C
ATOM 22 N2 G A1828 -83.020 -6.978 7.013 1.00 16.72 N
ATOM 23 N3 G A1828 -81.167 -5.639 6.996 1.00 16.72 N
ATOM 24 C4 G A1828 -79.843 -5.513 7.291 1.00 16.72 C
ATOM 25 P C A1829 -80.454 -0.755 10.500 1.00 1.43 P
ATOM 26 OP1 C A1829 -80.877 0.587 10.909 1.00 1.43 O
ATOM 27 OP2 C A1829 -79.670 -1.564 11.463 1.00 1.43 O
ATOM 28 O5' C A1829 -81.706 -1.580 9.998 1.00 1.43 O
TER
ATOM 1 O3' C B1826 -71.124 -0.332 4.661 1.00 1.54 O
ATOM 2 P U B1827 -71.592 0.044 6.150 1.00 0.82 P
ATOM 3 OP1 U B1827 -72.728 0.991 6.025 1.00 0.82 O
ATOM 4 OP2 U B1827 -70.383 0.471 6.882 1.00 0.82 O
ATOM 5 O5' U B1827 -72.107 -1.335 6.729 1.00 0.82 O
ATOM 6 C5' U B1827 -73.184 -2.003 6.125 1.00 0.82 C
ATOM 7 C4' U B1827 -73.300 -3.387 6.656 1.00 0.82 C
ATOM 8 O4' U B1827 -72.090 -4.092 6.350 1.00 0.82 O
ATOM 9 C3' U B1827 -73.478 -3.505 8.176 1.00 0.82 C
ATOM 10 O3' U B1827 -74.858 -3.504 8.554 1.00 0.82 O
ATOM 11 C2' U B1827 -72.779 -4.819 8.513 1.00 0.82 C
ATOM 12 O2' U B1827 -73.685 -5.907 8.461 1.00 0.82 O
ATOM 13 C1' U B1827 -71.758 -4.971 7.384 1.00 0.82 C
ATOM 14 N1 U B1827 -70.399 -4.673 7.821 1.00 0.84 N
ATOM 15 C2 U B1827 -69.805 -5.645 8.572 1.00 0.84 C
ATOM 16 O2 U B1827 -70.414 -6.653 8.871 1.00 0.84 O
ATOM 17 N3 U B1827 -68.522 -5.389 8.971 1.00 0.84 N
ATOM 18 C4 U B1827 -67.791 -4.255 8.673 1.00 0.84 C
ATOM 19 O4 U B1827 -66.630 -4.136 9.103 1.00 0.84 O
ATOM 20 C5 U B1827 -68.485 -3.303 7.851 1.00 0.84 C
ATOM 21 C6 U B1827 -69.741 -3.540 7.462 1.00 0.84 C
ATOM 22 P G B1828 -75.408 -2.733 9.876 1.00 16.84 P
ATOM 23 OP1 G B1828 -74.328 -1.804 10.346 1.00 16.84 O
ATOM 24 OP2 G B1828 -75.937 -3.763 10.818 1.00 16.84 O
ATOM 25 O5' G B1828 -76.627 -1.904 9.297 1.00 16.84 O
TER
ATOM 2 P G A1828 -75.408 -2.733 9.876 1.00 16.84 P
ATOM 3 OP1 G A1828 -74.328 -1.804 10.346 1.00 16.84 O
ATOM 4 OP2 G A1828 -75.937 -3.763 10.818 1.00 16.84 O
ATOM 5 O5' G A1828 -76.627 -1.904 9.297 1.00 16.84 O
ATOM 6 C5' G A1828 -76.645 -1.493 7.947 1.00 16.84 C
ATOM 7 C4' G A1828 -78.052 -1.407 7.422 1.00 16.84 C
ATOM 8 O4' G A1828 -78.226 -2.370 6.345 1.00 16.84 O
ATOM 9 C3' G A1828 -79.158 -1.727 8.423 1.00 16.84 C
ATOM 10 O3' G A1828 -79.569 -0.592 9.166 1.00 16.84 O
ATOM 11 C2' G A1828 -80.236 -2.271 7.528 1.00 16.84 C
ATOM 12 O2' G A1828 -80.847 -1.213 6.817 1.00 16.84 O
ATOM 13 C1' G A1828 -79.401 -3.088 6.543 1.00 16.84 C
ATOM 14 N9 G A1828 -79.029 -4.410 7.097 1.00 16.72 N
ATOM 15 C8 G A1828 -77.790 -4.760 7.540 1.00 16.72 C
ATOM 16 N7 G A1828 -77.757 -5.974 7.983 1.00 16.72 N
ATOM 17 C5 G A1828 -79.040 -6.454 7.838 1.00 16.72 C
ATOM 18 C6 G A1828 -79.605 -7.704 8.151 1.00 16.72 C
ATOM 19 O6 G A1828 -78.989 -8.629 8.651 1.00 16.72 O
ATOM 20 N1 G A1828 -80.965 -7.820 7.855 1.00 16.72 N
ATOM 21 C2 G A1828 -81.707 -6.809 7.291 1.00 16.72 C
ATOM 22 N2 G A1828 -83.020 -6.978 7.013 1.00 16.72 N
ATOM 23 N3 G A1828 -81.167 -5.639 6.996 1.00 16.72 N
ATOM 24 C4 G A1828 -79.843 -5.513 7.291 1.00 16.72 C
ATOM 25 P C A1829 -80.454 -0.755 10.500 1.00 1.43 P
ATOM 26 OP1 C A1829 -80.877 0.587 10.909 1.00 1.43 O
ATOM 27 OP2 C A1829 -79.670 -1.564 11.463 1.00 1.43 O
ATOM 28 O5' C A1829 -81.706 -1.580 9.998 1.00 1.43 O
TER
ATOM 1 O3' C B1826 -71.124 -0.332 4.661 1.00 1.54 O
ATOM 2 P U B1827 -71.592 0.044 6.150 1.00 0.82 P
ATOM 3 OP1 U B1827 -72.728 0.991 6.025 1.00 0.82 O
ATOM 4 OP2 U B1827 -70.383 0.471 6.882 1.00 0.82 O
ATOM 5 O5' U B1827 -72.107 -1.335 6.729 1.00 0.82 O
ATOM 6 C5' U B1827 -73.184 -2.003 6.125 1.00 0.82 C
ATOM 7 C4' U B1827 -73.300 -3.387 6.656 1.00 0.82 C
ATOM 8 O4' U B1827 -72.090 -4.092 6.350 1.00 0.82 O
ATOM 9 C3' U B1827 -73.478 -3.505 8.176 1.00 0.82 C
ATOM 10 O3' U B1827 -74.858 -3.504 8.554 1.00 0.82 O
ATOM 11 C2' U B1827 -72.779 -4.819 8.513 1.00 0.82 C
ATOM 12 O2' U B1827 -73.685 -5.907 8.461 1.00 0.82 O
ATOM 13 C1' U B1827 -71.758 -4.971 7.384 1.00 0.82 C
ATOM 14 N1 U B1827 -70.399 -4.673 7.821 1.00 0.84 N
ATOM 15 C2 U B1827 -69.805 -5.645 8.572 1.00 0.84 C
ATOM 16 O2 U B1827 -70.414 -6.653 8.871 1.00 0.84 O
ATOM 17 N3 U B1827 -68.522 -5.389 8.971 1.00 0.84 N
ATOM 18 C4 U B1827 -67.791 -4.255 8.673 1.00 0.84 C
ATOM 19 O4 U B1827 -66.630 -4.136 9.103 1.00 0.84 O
ATOM 20 C5 U B1827 -68.485 -3.303 7.851 1.00 0.84 C
ATOM 21 C6 U B1827 -69.741 -3.540 7.462 1.00 0.84 C
ATOM 22 P G B1828 -75.408 -2.733 9.876 1.00 16.84 P
ATOM 23 OP1 G B1828 -74.328 -1.804 10.346 1.00 16.84 O
ATOM 24 OP2 G B1828 -75.937 -3.763 10.818 1.00 16.84 O
ATOM 25 O5' G B1828 -76.627 -1.904 9.297 1.00 16.84 O
TER
Atoms:
OP1: (-74.328,-1.804,10.346)
OP2: (-75.937,-3.763,10.818)
C3': (-79.158,-1.727,8.423)
C1': (-79.401,-3.088,6.543)
C5': (-76.645,-1.493,7.947)
O6: (-78.989,-8.629,8.651)
O4': (-78.226,-2.370,6.345)
C8: (-77.790,-4.760,7.540)
C2: (-81.707,-6.809,7.291)
C6: (-79.605,-7.704,8.151)
C5: (-79.040,-6.454,7.838)
C4: (-79.843,-5.513,7.291)
P: (-75.408,-2.733,9.876)
C4': (-78.052,-1.407,7.422)
C2': (-80.236,-2.271,7.528)
O2': (-80.847,-1.213,6.817)
N1: (-80.965,-7.820,7.855)
N2: (-83.020,-6.978,7.013)
N3: (-81.167,-5.639,6.996)
N7: (-77.757,-5.974,7.983)
N9: (-79.029,-4.410,7.097)
O5': (-76.627,-1.904,9.297)
O3': (-79.569,-0.592,9.166)
OP2: (-75.937,-3.763,10.818)
C3': (-79.158,-1.727,8.423)
C1': (-79.401,-3.088,6.543)
C5': (-76.645,-1.493,7.947)
O6: (-78.989,-8.629,8.651)
O4': (-78.226,-2.370,6.345)
C8: (-77.790,-4.760,7.540)
C2: (-81.707,-6.809,7.291)
C6: (-79.605,-7.704,8.151)
C5: (-79.040,-6.454,7.838)
C4: (-79.843,-5.513,7.291)
P: (-75.408,-2.733,9.876)
C4': (-78.052,-1.407,7.422)
C2': (-80.236,-2.271,7.528)
O2': (-80.847,-1.213,6.817)
N1: (-80.965,-7.820,7.855)
N2: (-83.020,-6.978,7.013)
N3: (-81.167,-5.639,6.996)
N7: (-77.757,-5.974,7.983)
N9: (-79.029,-4.410,7.097)
O5': (-76.627,-1.904,9.297)
O3': (-79.569,-0.592,9.166)
C4: (-67.791,-4.255,8.673)
N3: (-68.522,-5.389,8.971)
OP1: (-72.728,0.991,6.025)
OP2: (-70.383,0.471,6.882)
C2: (-69.805,-5.645,8.572)
C1': (-71.758,-4.971,7.384)
C3': (-73.478,-3.505,8.176)
O5': (-72.107,-1.335,6.729)
O4': (-72.090,-4.092,6.350)
C5': (-73.184,-2.003,6.125)
P: (-71.592,0.044,6.150)
C4': (-73.300,-3.387,6.656)
C2': (-72.779,-4.819,8.513)
O2': (-73.685,-5.907,8.461)
N1: (-70.399,-4.673,7.821)
O4: (-66.630,-4.136,9.103)
O2: (-70.414,-6.653,8.871)
C6: (-69.741,-3.540,7.462)
C5: (-68.485,-3.303,7.851)
O3': (-74.858,-3.504,8.554)
N3: (-68.522,-5.389,8.971)
OP1: (-72.728,0.991,6.025)
OP2: (-70.383,0.471,6.882)
C2: (-69.805,-5.645,8.572)
C1': (-71.758,-4.971,7.384)
C3': (-73.478,-3.505,8.176)
O5': (-72.107,-1.335,6.729)
O4': (-72.090,-4.092,6.350)
C5': (-73.184,-2.003,6.125)
P: (-71.592,0.044,6.150)
C4': (-73.300,-3.387,6.656)
C2': (-72.779,-4.819,8.513)
O2': (-73.685,-5.907,8.461)
N1: (-70.399,-4.673,7.821)
O4: (-66.630,-4.136,9.103)
O2: (-70.414,-6.653,8.871)
C6: (-69.741,-3.540,7.462)
C5: (-68.485,-3.303,7.851)
O3': (-74.858,-3.504,8.554)
Image (generated by PyMOL):