Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2406:A2405
Extra
PDB:
ATOM 1 O3' U A2405 -118.292 -50.145 -44.384 1.00 36.72 O
ATOM 2 P G A2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 3 OP1 G A2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 4 OP2 G A2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 5 O5' G A2406 -118.871 -48.055 -45.631 1.00 41.26 O
ATOM 6 C5' G A2406 -118.030 -46.964 -46.094 1.00 41.26 C
ATOM 7 C4' G A2406 -117.834 -45.956 -44.987 1.00 41.26 C
ATOM 8 O4' G A2406 -119.114 -45.718 -44.357 1.00 41.26 O
ATOM 9 C3' G A2406 -116.922 -46.436 -43.879 1.00 41.26 C
ATOM 10 O3' G A2406 -115.618 -45.958 -44.168 1.00 41.26 O
ATOM 11 C2' G A2406 -117.472 -45.746 -42.640 1.00 41.26 C
ATOM 12 O2' G A2406 -116.966 -44.436 -42.526 1.00 41.26 O
ATOM 13 C1' G A2406 -118.966 -45.655 -42.956 1.00 41.26 C
ATOM 14 N9 G A2406 -119.831 -46.682 -42.382 1.00 45.99 N
ATOM 15 C8 G A2406 -119.721 -48.045 -42.532 1.00 46.04 C
ATOM 16 N7 G A2406 -120.703 -48.703 -41.975 1.00 46.06 N
ATOM 17 C5 G A2406 -121.501 -47.718 -41.405 1.00 46.06 C
ATOM 18 C6 G A2406 -122.730 -47.820 -40.683 1.00 46.08 C
ATOM 19 O6 G A2406 -123.386 -48.828 -40.407 1.00 46.06 O
ATOM 20 N1 G A2406 -123.191 -46.575 -40.283 1.00 46.07 N
ATOM 21 C2 G A2406 -122.570 -45.382 -40.544 1.00 46.03 C
ATOM 22 N2 G A2406 -123.180 -44.297 -40.067 1.00 46.04 N
ATOM 23 N3 G A2406 -121.435 -45.265 -41.224 1.00 46.00 N
ATOM 24 C4 G A2406 -120.962 -46.466 -41.623 1.00 46.01 C
ATOM 25 P A A2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 26 OP1 A A2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 27 OP2 A A2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 28 O5' A A2407 -114.467 -48.139 -44.622 1.00 60.10 O
TER
ATOM 1 O3' C B2404 -118.481 -56.068 -43.143 1.00 44.30 O
ATOM 2 P U B2405 -118.689 -55.380 -44.578 1.00 56.45 P
ATOM 3 OP1 U B2405 -120.141 -55.317 -44.795 1.00 26.26 O
ATOM 4 OP2 U B2405 -117.832 -56.037 -45.594 1.00 26.20 O
ATOM 5 O5' U B2405 -118.131 -53.914 -44.336 1.00 36.72 O
ATOM 6 C5' U B2405 -118.594 -53.149 -43.216 1.00 36.72 C
ATOM 7 C4' U B2405 -117.666 -51.994 -42.942 1.00 36.72 C
ATOM 8 O4' U B2405 -116.391 -52.474 -42.452 1.00 36.72 O
ATOM 9 C3' U B2405 -117.300 -51.119 -44.127 1.00 36.72 C
ATOM 10 O3' U B2405 -118.292 -50.145 -44.384 1.00 36.72 O
ATOM 11 C2' U B2405 -116.014 -50.453 -43.664 1.00 36.72 C
ATOM 12 O2' U B2405 -116.273 -49.310 -42.875 1.00 36.72 O
ATOM 13 C1' U B2405 -115.384 -51.544 -42.797 1.00 36.72 C
ATOM 14 N1 U B2405 -114.289 -52.242 -43.480 1.00 37.43 N
ATOM 15 C2 U B2405 -113.012 -51.748 -43.286 1.00 37.47 C
ATOM 16 O2 U B2405 -112.771 -50.789 -42.568 1.00 37.41 O
ATOM 17 N3 U B2405 -112.021 -52.414 -43.960 1.00 37.49 N
ATOM 18 C4 U B2405 -112.166 -53.499 -44.782 1.00 37.39 C
ATOM 19 O4 U B2405 -111.163 -53.994 -45.310 1.00 37.32 O
ATOM 20 C5 U B2405 -113.519 -53.957 -44.929 1.00 37.42 C
ATOM 21 C6 U B2405 -114.509 -53.327 -44.287 1.00 37.47 C
ATOM 22 P G B2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 23 OP1 G B2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 24 OP2 G B2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 25 O5' G B2406 -118.871 -48.055 -45.631 1.00 41.26 O
TER
ATOM 2 P G A2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 3 OP1 G A2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 4 OP2 G A2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 5 O5' G A2406 -118.871 -48.055 -45.631 1.00 41.26 O
ATOM 6 C5' G A2406 -118.030 -46.964 -46.094 1.00 41.26 C
ATOM 7 C4' G A2406 -117.834 -45.956 -44.987 1.00 41.26 C
ATOM 8 O4' G A2406 -119.114 -45.718 -44.357 1.00 41.26 O
ATOM 9 C3' G A2406 -116.922 -46.436 -43.879 1.00 41.26 C
ATOM 10 O3' G A2406 -115.618 -45.958 -44.168 1.00 41.26 O
ATOM 11 C2' G A2406 -117.472 -45.746 -42.640 1.00 41.26 C
ATOM 12 O2' G A2406 -116.966 -44.436 -42.526 1.00 41.26 O
ATOM 13 C1' G A2406 -118.966 -45.655 -42.956 1.00 41.26 C
ATOM 14 N9 G A2406 -119.831 -46.682 -42.382 1.00 45.99 N
ATOM 15 C8 G A2406 -119.721 -48.045 -42.532 1.00 46.04 C
ATOM 16 N7 G A2406 -120.703 -48.703 -41.975 1.00 46.06 N
ATOM 17 C5 G A2406 -121.501 -47.718 -41.405 1.00 46.06 C
ATOM 18 C6 G A2406 -122.730 -47.820 -40.683 1.00 46.08 C
ATOM 19 O6 G A2406 -123.386 -48.828 -40.407 1.00 46.06 O
ATOM 20 N1 G A2406 -123.191 -46.575 -40.283 1.00 46.07 N
ATOM 21 C2 G A2406 -122.570 -45.382 -40.544 1.00 46.03 C
ATOM 22 N2 G A2406 -123.180 -44.297 -40.067 1.00 46.04 N
ATOM 23 N3 G A2406 -121.435 -45.265 -41.224 1.00 46.00 N
ATOM 24 C4 G A2406 -120.962 -46.466 -41.623 1.00 46.01 C
ATOM 25 P A A2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 26 OP1 A A2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 27 OP2 A A2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 28 O5' A A2407 -114.467 -48.139 -44.622 1.00 60.10 O
TER
ATOM 1 O3' C B2404 -118.481 -56.068 -43.143 1.00 44.30 O
ATOM 2 P U B2405 -118.689 -55.380 -44.578 1.00 56.45 P
ATOM 3 OP1 U B2405 -120.141 -55.317 -44.795 1.00 26.26 O
ATOM 4 OP2 U B2405 -117.832 -56.037 -45.594 1.00 26.20 O
ATOM 5 O5' U B2405 -118.131 -53.914 -44.336 1.00 36.72 O
ATOM 6 C5' U B2405 -118.594 -53.149 -43.216 1.00 36.72 C
ATOM 7 C4' U B2405 -117.666 -51.994 -42.942 1.00 36.72 C
ATOM 8 O4' U B2405 -116.391 -52.474 -42.452 1.00 36.72 O
ATOM 9 C3' U B2405 -117.300 -51.119 -44.127 1.00 36.72 C
ATOM 10 O3' U B2405 -118.292 -50.145 -44.384 1.00 36.72 O
ATOM 11 C2' U B2405 -116.014 -50.453 -43.664 1.00 36.72 C
ATOM 12 O2' U B2405 -116.273 -49.310 -42.875 1.00 36.72 O
ATOM 13 C1' U B2405 -115.384 -51.544 -42.797 1.00 36.72 C
ATOM 14 N1 U B2405 -114.289 -52.242 -43.480 1.00 37.43 N
ATOM 15 C2 U B2405 -113.012 -51.748 -43.286 1.00 37.47 C
ATOM 16 O2 U B2405 -112.771 -50.789 -42.568 1.00 37.41 O
ATOM 17 N3 U B2405 -112.021 -52.414 -43.960 1.00 37.49 N
ATOM 18 C4 U B2405 -112.166 -53.499 -44.782 1.00 37.39 C
ATOM 19 O4 U B2405 -111.163 -53.994 -45.310 1.00 37.32 O
ATOM 20 C5 U B2405 -113.519 -53.957 -44.929 1.00 37.42 C
ATOM 21 C6 U B2405 -114.509 -53.327 -44.287 1.00 37.47 C
ATOM 22 P G B2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 23 OP1 G B2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 24 OP2 G B2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 25 O5' G B2406 -118.871 -48.055 -45.631 1.00 41.26 O
TER
Atoms:
OP1: (-119.650,-50.322,-46.418)
OP2: (-117.168,-49.606,-46.605)
C3': (-116.922,-46.436,-43.879)
C1': (-118.966,-45.655,-42.956)
C5': (-118.030,-46.964,-46.094)
O6: (-123.386,-48.828,-40.407)
O4': (-119.114,-45.718,-44.357)
C8: (-119.721,-48.045,-42.532)
C2: (-122.570,-45.382,-40.544)
C6: (-122.730,-47.820,-40.683)
C5: (-121.501,-47.718,-41.405)
C4: (-120.962,-46.466,-41.623)
P: (-118.475,-49.580,-45.873)
C4': (-117.834,-45.956,-44.987)
C2': (-117.472,-45.746,-42.640)
O2': (-116.966,-44.436,-42.526)
N1: (-123.191,-46.575,-40.283)
N2: (-123.180,-44.297,-40.067)
N3: (-121.435,-45.265,-41.224)
N7: (-120.703,-48.703,-41.975)
N9: (-119.831,-46.682,-42.382)
O5': (-118.871,-48.055,-45.631)
O3': (-115.618,-45.958,-44.168)
OP2: (-117.168,-49.606,-46.605)
C3': (-116.922,-46.436,-43.879)
C1': (-118.966,-45.655,-42.956)
C5': (-118.030,-46.964,-46.094)
O6: (-123.386,-48.828,-40.407)
O4': (-119.114,-45.718,-44.357)
C8: (-119.721,-48.045,-42.532)
C2: (-122.570,-45.382,-40.544)
C6: (-122.730,-47.820,-40.683)
C5: (-121.501,-47.718,-41.405)
C4: (-120.962,-46.466,-41.623)
P: (-118.475,-49.580,-45.873)
C4': (-117.834,-45.956,-44.987)
C2': (-117.472,-45.746,-42.640)
O2': (-116.966,-44.436,-42.526)
N1: (-123.191,-46.575,-40.283)
N2: (-123.180,-44.297,-40.067)
N3: (-121.435,-45.265,-41.224)
N7: (-120.703,-48.703,-41.975)
N9: (-119.831,-46.682,-42.382)
O5': (-118.871,-48.055,-45.631)
O3': (-115.618,-45.958,-44.168)
C4: (-112.166,-53.499,-44.782)
N3: (-112.021,-52.414,-43.960)
OP1: (-120.141,-55.317,-44.795)
OP2: (-117.832,-56.037,-45.594)
C2: (-113.012,-51.748,-43.286)
C1': (-115.384,-51.544,-42.797)
C3': (-117.300,-51.119,-44.127)
O5': (-118.131,-53.914,-44.336)
O4': (-116.391,-52.474,-42.452)
C5': (-118.594,-53.149,-43.216)
P: (-118.689,-55.380,-44.578)
C4': (-117.666,-51.994,-42.942)
C2': (-116.014,-50.453,-43.664)
O2': (-116.273,-49.310,-42.875)
N1: (-114.289,-52.242,-43.480)
O4: (-111.163,-53.994,-45.310)
O2: (-112.771,-50.789,-42.568)
C6: (-114.509,-53.327,-44.287)
C5: (-113.519,-53.957,-44.929)
O3': (-118.292,-50.145,-44.384)
N3: (-112.021,-52.414,-43.960)
OP1: (-120.141,-55.317,-44.795)
OP2: (-117.832,-56.037,-45.594)
C2: (-113.012,-51.748,-43.286)
C1': (-115.384,-51.544,-42.797)
C3': (-117.300,-51.119,-44.127)
O5': (-118.131,-53.914,-44.336)
O4': (-116.391,-52.474,-42.452)
C5': (-118.594,-53.149,-43.216)
P: (-118.689,-55.380,-44.578)
C4': (-117.666,-51.994,-42.942)
C2': (-116.014,-50.453,-43.664)
O2': (-116.273,-49.310,-42.875)
N1: (-114.289,-52.242,-43.480)
O4: (-111.163,-53.994,-45.310)
O2: (-112.771,-50.789,-42.568)
C6: (-114.509,-53.327,-44.287)
C5: (-113.519,-53.957,-44.929)
O3': (-118.292,-50.145,-44.384)
Image (generated by PyMOL):