Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02405:02404
Extra
PDB:
ATOM 1 O3' U A2404 72.112 108.356 159.083 1.00 65.47 O
ATOM 2 P G A2405 72.903 108.609 160.460 1.00 65.41 P
ATOM 3 OP1 G A2405 72.378 107.613 161.422 1.00 65.41 O
ATOM 4 OP2 G A2405 72.850 110.056 160.808 1.00 66.54 O
ATOM 5 O5' G A2405 74.396 108.196 160.082 1.00 64.83 O
ATOM 6 C5' G A2405 75.532 108.990 160.481 1.00 65.36 C
ATOM 7 C4' G A2405 76.558 109.017 159.372 1.00 66.35 C
ATOM 8 O4' G A2405 77.003 107.671 159.066 1.00 66.03 O
ATOM 9 C3' G A2405 76.054 109.609 158.066 1.00 67.67 C
ATOM 10 O3' G A2405 76.416 110.990 158.029 1.00 70.18 O
ATOM 11 C2' G A2405 76.782 108.790 157.005 1.00 67.06 C
ATOM 12 O2' G A2405 78.097 109.256 156.790 1.00 67.05 O
ATOM 13 C1' G A2405 76.869 107.420 157.681 1.00 66.26 C
ATOM 14 N9 G A2405 75.754 106.487 157.528 1.00 66.61 N
ATOM 15 C8 G A2405 74.413 106.751 157.682 1.00 66.61 C
ATOM 16 N7 G A2405 73.673 105.675 157.656 1.00 67.20 N
ATOM 17 C5 G A2405 74.574 104.641 157.435 1.00 66.54 C
ATOM 18 C6 G A2405 74.364 103.232 157.354 1.00 66.48 C
ATOM 19 O6 G A2405 73.312 102.594 157.501 1.00 65.69 O
ATOM 20 N1 G A2405 75.550 102.556 157.100 1.00 66.56 N
ATOM 21 C2 G A2405 76.782 103.146 156.965 1.00 67.05 C
ATOM 22 N2 G A2405 77.809 102.317 156.724 1.00 67.32 N
ATOM 23 N3 G A2405 76.994 104.450 157.062 1.00 66.46 N
ATOM 24 C4 G A2405 75.855 105.131 157.300 1.00 66.23 C
ATOM 25 P C A2406 75.419 112.076 157.390 1.00 71.20 P
ATOM 26 OP1 C A2406 74.938 111.523 156.103 1.00 72.98 O
ATOM 27 OP2 C A2406 76.112 113.393 157.420 1.00 69.62 O
ATOM 28 O5' C A2406 74.176 112.139 158.387 1.00 71.92 O
TER
ATOM 1 O3' G B2403 65.975 108.636 158.300 1.00 60.95 O
ATOM 2 P U B2404 66.885 108.904 159.597 1.00 63.19 P
ATOM 3 OP1 U B2404 66.896 107.625 160.340 1.00 64.26 O
ATOM 4 OP2 U B2404 66.438 110.148 160.285 1.00 62.24 O
ATOM 5 O5' U B2404 68.340 109.170 159.003 1.00 61.42 O
ATOM 6 C5' U B2404 69.024 108.159 158.248 1.00 60.36 C
ATOM 7 C4' U B2404 70.257 108.739 157.596 1.00 61.54 C
ATOM 8 O4' U B2404 69.875 109.820 156.713 1.00 60.96 O
ATOM 9 C3' U B2404 71.266 109.373 158.537 1.00 63.01 C
ATOM 10 O3' U B2404 72.112 108.356 159.083 1.00 65.47 O
ATOM 11 C2' U B2404 72.020 110.330 157.614 1.00 61.20 C
ATOM 12 O2' U B2404 73.012 109.698 156.835 1.00 60.77 O
ATOM 13 C1' U B2404 70.909 110.784 156.667 1.00 59.69 C
ATOM 14 N1 U B2404 70.336 112.113 156.931 1.00 59.59 N
ATOM 15 C2 U B2404 71.023 113.226 156.446 1.00 59.76 C
ATOM 16 O2 U B2404 72.086 113.152 155.840 1.00 58.49 O
ATOM 17 N3 U B2404 70.417 114.432 156.698 1.00 57.94 N
ATOM 18 C4 U B2404 69.233 114.643 157.367 1.00 56.92 C
ATOM 19 O4 U B2404 68.818 115.794 157.504 1.00 57.51 O
ATOM 20 C5 U B2404 68.592 113.453 157.844 1.00 56.72 C
ATOM 21 C6 U B2404 69.150 112.261 157.619 1.00 57.97 C
ATOM 22 P G B2405 72.903 108.609 160.460 1.00 65.41 P
ATOM 23 OP1 G B2405 72.378 107.613 161.422 1.00 65.41 O
ATOM 24 OP2 G B2405 72.850 110.056 160.808 1.00 66.54 O
ATOM 25 O5' G B2405 74.396 108.196 160.082 1.00 64.83 O
TER
ATOM 2 P G A2405 72.903 108.609 160.460 1.00 65.41 P
ATOM 3 OP1 G A2405 72.378 107.613 161.422 1.00 65.41 O
ATOM 4 OP2 G A2405 72.850 110.056 160.808 1.00 66.54 O
ATOM 5 O5' G A2405 74.396 108.196 160.082 1.00 64.83 O
ATOM 6 C5' G A2405 75.532 108.990 160.481 1.00 65.36 C
ATOM 7 C4' G A2405 76.558 109.017 159.372 1.00 66.35 C
ATOM 8 O4' G A2405 77.003 107.671 159.066 1.00 66.03 O
ATOM 9 C3' G A2405 76.054 109.609 158.066 1.00 67.67 C
ATOM 10 O3' G A2405 76.416 110.990 158.029 1.00 70.18 O
ATOM 11 C2' G A2405 76.782 108.790 157.005 1.00 67.06 C
ATOM 12 O2' G A2405 78.097 109.256 156.790 1.00 67.05 O
ATOM 13 C1' G A2405 76.869 107.420 157.681 1.00 66.26 C
ATOM 14 N9 G A2405 75.754 106.487 157.528 1.00 66.61 N
ATOM 15 C8 G A2405 74.413 106.751 157.682 1.00 66.61 C
ATOM 16 N7 G A2405 73.673 105.675 157.656 1.00 67.20 N
ATOM 17 C5 G A2405 74.574 104.641 157.435 1.00 66.54 C
ATOM 18 C6 G A2405 74.364 103.232 157.354 1.00 66.48 C
ATOM 19 O6 G A2405 73.312 102.594 157.501 1.00 65.69 O
ATOM 20 N1 G A2405 75.550 102.556 157.100 1.00 66.56 N
ATOM 21 C2 G A2405 76.782 103.146 156.965 1.00 67.05 C
ATOM 22 N2 G A2405 77.809 102.317 156.724 1.00 67.32 N
ATOM 23 N3 G A2405 76.994 104.450 157.062 1.00 66.46 N
ATOM 24 C4 G A2405 75.855 105.131 157.300 1.00 66.23 C
ATOM 25 P C A2406 75.419 112.076 157.390 1.00 71.20 P
ATOM 26 OP1 C A2406 74.938 111.523 156.103 1.00 72.98 O
ATOM 27 OP2 C A2406 76.112 113.393 157.420 1.00 69.62 O
ATOM 28 O5' C A2406 74.176 112.139 158.387 1.00 71.92 O
TER
ATOM 1 O3' G B2403 65.975 108.636 158.300 1.00 60.95 O
ATOM 2 P U B2404 66.885 108.904 159.597 1.00 63.19 P
ATOM 3 OP1 U B2404 66.896 107.625 160.340 1.00 64.26 O
ATOM 4 OP2 U B2404 66.438 110.148 160.285 1.00 62.24 O
ATOM 5 O5' U B2404 68.340 109.170 159.003 1.00 61.42 O
ATOM 6 C5' U B2404 69.024 108.159 158.248 1.00 60.36 C
ATOM 7 C4' U B2404 70.257 108.739 157.596 1.00 61.54 C
ATOM 8 O4' U B2404 69.875 109.820 156.713 1.00 60.96 O
ATOM 9 C3' U B2404 71.266 109.373 158.537 1.00 63.01 C
ATOM 10 O3' U B2404 72.112 108.356 159.083 1.00 65.47 O
ATOM 11 C2' U B2404 72.020 110.330 157.614 1.00 61.20 C
ATOM 12 O2' U B2404 73.012 109.698 156.835 1.00 60.77 O
ATOM 13 C1' U B2404 70.909 110.784 156.667 1.00 59.69 C
ATOM 14 N1 U B2404 70.336 112.113 156.931 1.00 59.59 N
ATOM 15 C2 U B2404 71.023 113.226 156.446 1.00 59.76 C
ATOM 16 O2 U B2404 72.086 113.152 155.840 1.00 58.49 O
ATOM 17 N3 U B2404 70.417 114.432 156.698 1.00 57.94 N
ATOM 18 C4 U B2404 69.233 114.643 157.367 1.00 56.92 C
ATOM 19 O4 U B2404 68.818 115.794 157.504 1.00 57.51 O
ATOM 20 C5 U B2404 68.592 113.453 157.844 1.00 56.72 C
ATOM 21 C6 U B2404 69.150 112.261 157.619 1.00 57.97 C
ATOM 22 P G B2405 72.903 108.609 160.460 1.00 65.41 P
ATOM 23 OP1 G B2405 72.378 107.613 161.422 1.00 65.41 O
ATOM 24 OP2 G B2405 72.850 110.056 160.808 1.00 66.54 O
ATOM 25 O5' G B2405 74.396 108.196 160.082 1.00 64.83 O
TER
Atoms:
OP1: (72.378,107.613,161.422)
OP2: (72.850,110.056,160.808)
C3': (76.054,109.609,158.066)
C1': (76.869,107.420,157.681)
C5': (75.532,108.990,160.481)
O6: (73.312,102.594,157.501)
O4': (77.003,107.671,159.066)
C8: (74.413,106.751,157.682)
C2: (76.782,103.146,156.965)
C6: (74.364,103.232,157.354)
C5: (74.574,104.641,157.435)
C4: (75.855,105.131,157.300)
P: (72.903,108.609,160.460)
C4': (76.558,109.017,159.372)
C2': (76.782,108.790,157.005)
O2': (78.097,109.256,156.790)
N1: (75.550,102.556,157.100)
N2: (77.809,102.317,156.724)
N3: (76.994,104.450,157.062)
N7: (73.673,105.675,157.656)
N9: (75.754,106.487,157.528)
O5': (74.396,108.196,160.082)
O3': (76.416,110.990,158.029)
OP2: (72.850,110.056,160.808)
C3': (76.054,109.609,158.066)
C1': (76.869,107.420,157.681)
C5': (75.532,108.990,160.481)
O6: (73.312,102.594,157.501)
O4': (77.003,107.671,159.066)
C8: (74.413,106.751,157.682)
C2: (76.782,103.146,156.965)
C6: (74.364,103.232,157.354)
C5: (74.574,104.641,157.435)
C4: (75.855,105.131,157.300)
P: (72.903,108.609,160.460)
C4': (76.558,109.017,159.372)
C2': (76.782,108.790,157.005)
O2': (78.097,109.256,156.790)
N1: (75.550,102.556,157.100)
N2: (77.809,102.317,156.724)
N3: (76.994,104.450,157.062)
N7: (73.673,105.675,157.656)
N9: (75.754,106.487,157.528)
O5': (74.396,108.196,160.082)
O3': (76.416,110.990,158.029)
C4: (69.233,114.643,157.367)
N3: (70.417,114.432,156.698)
OP1: (66.896,107.625,160.340)
OP2: (66.438,110.148,160.285)
C2: (71.023,113.226,156.446)
C1': (70.909,110.784,156.667)
C3': (71.266,109.373,158.537)
O5': (68.340,109.170,159.003)
O4': (69.875,109.820,156.713)
C5': (69.024,108.159,158.248)
P: (66.885,108.904,159.597)
C4': (70.257,108.739,157.596)
C2': (72.020,110.330,157.614)
O2': (73.012,109.698,156.835)
N1: (70.336,112.113,156.931)
O4: (68.818,115.794,157.504)
O2: (72.086,113.152,155.840)
C6: (69.150,112.261,157.619)
C5: (68.592,113.453,157.844)
O3': (72.112,108.356,159.083)
N3: (70.417,114.432,156.698)
OP1: (66.896,107.625,160.340)
OP2: (66.438,110.148,160.285)
C2: (71.023,113.226,156.446)
C1': (70.909,110.784,156.667)
C3': (71.266,109.373,158.537)
O5': (68.340,109.170,159.003)
O4': (69.875,109.820,156.713)
C5': (69.024,108.159,158.248)
P: (66.885,108.904,159.597)
C4': (70.257,108.739,157.596)
C2': (72.020,110.330,157.614)
O2': (73.012,109.698,156.835)
N1: (70.336,112.113,156.931)
O4: (68.818,115.794,157.504)
O2: (72.086,113.152,155.840)
C6: (69.150,112.261,157.619)
C5: (68.592,113.453,157.844)
O3': (72.112,108.356,159.083)
Image (generated by PyMOL):