Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1313:A1312
Extra
PDB:
ATOM 1 O3' U A1312 40.092 -36.557 -50.574 1.00 55.82 O
ATOM 2 P G A1313 41.032 -36.215 -51.837 1.00 51.64 P
ATOM 3 OP1 G A1313 41.072 -37.408 -52.730 1.00 50.60 O
ATOM 4 OP2 G A1313 42.304 -35.665 -51.281 1.00 50.97 O
ATOM 5 O5' G A1313 40.279 -35.025 -52.592 1.00 53.01 O
ATOM 6 C5' G A1313 39.056 -35.236 -53.287 1.00 50.77 C
ATOM 7 C4' G A1313 38.422 -33.905 -53.617 1.00 59.53 C
ATOM 8 O4' G A1313 38.067 -33.228 -52.382 1.00 53.97 O
ATOM 9 C3' G A1313 39.322 -32.941 -54.376 1.00 61.98 C
ATOM 10 O3' G A1313 39.160 -33.152 -55.779 1.00 63.87 O
ATOM 11 C2' G A1313 38.818 -31.575 -53.915 1.00 56.48 C
ATOM 12 O2' G A1313 37.686 -31.147 -54.648 1.00 57.85 O
ATOM 13 C1' G A1313 38.419 -31.865 -52.461 1.00 54.41 C
ATOM 14 N9 G A1313 39.507 -31.684 -51.510 1.00 60.46 N
ATOM 15 C8 G A1313 40.406 -32.654 -51.114 1.00 62.62 C
ATOM 16 N7 G A1313 41.285 -32.220 -50.257 1.00 65.56 N
ATOM 17 C5 G A1313 40.951 -30.888 -50.071 1.00 64.49 C
ATOM 18 C6 G A1313 41.549 -29.906 -49.256 1.00 65.74 C
ATOM 19 O6 G A1313 42.520 -30.031 -48.476 1.00 66.19 O
ATOM 20 N1 G A1313 40.907 -28.682 -49.387 1.00 63.10 N
ATOM 21 C2 G A1313 39.822 -28.442 -50.187 1.00 58.23 C
ATOM 22 N2 G A1313 39.372 -27.191 -50.188 1.00 63.39 N
ATOM 23 N3 G A1313 39.234 -29.353 -50.933 1.00 57.09 N
ATOM 24 C4 G A1313 39.850 -30.543 -50.837 1.00 62.10 C
ATOM 25 P A A1314 40.204 -32.521 -56.828 1.00 72.84 P
ATOM 26 OP1 A A1314 40.813 -33.626 -57.606 1.00 71.86 O
ATOM 27 OP2 A A1314 41.082 -31.540 -56.143 1.00 68.73 O
ATOM 28 O5' A A1314 39.259 -31.725 -57.819 1.00 67.43 O
TER
ATOM 1 O3' G B1311 42.722 -35.966 -44.923 1.00 47.30 O
ATOM 2 P U B1312 43.279 -35.440 -46.346 1.00 49.97 P
ATOM 3 OP1 U B1312 44.226 -36.444 -46.864 1.00 43.10 O
ATOM 4 OP2 U B1312 43.741 -34.030 -46.186 1.00 61.24 O
ATOM 5 O5' U B1312 41.993 -35.465 -47.300 1.00 48.54 O
ATOM 6 C5' U B1312 41.223 -36.658 -47.471 1.00 56.87 C
ATOM 7 C4' U B1312 39.909 -36.345 -48.149 1.00 50.75 C
ATOM 8 O4' U B1312 39.149 -35.454 -47.298 1.00 56.09 O
ATOM 9 C3' U B1312 39.976 -35.635 -49.496 1.00 51.49 C
ATOM 10 O3' U B1312 40.092 -36.557 -50.574 1.00 55.82 O
ATOM 11 C2' U B1312 38.628 -34.930 -49.568 1.00 56.56 C
ATOM 12 O2' U B1312 37.607 -35.779 -50.064 1.00 58.13 O
ATOM 13 C1' U B1312 38.371 -34.589 -48.097 1.00 56.10 C
ATOM 14 N1 U B1312 38.700 -33.195 -47.762 1.00 56.55 N
ATOM 15 C2 U B1312 37.782 -32.227 -48.127 1.00 60.14 C
ATOM 16 O2 U B1312 36.727 -32.495 -48.681 1.00 61.08 O
ATOM 17 N3 U B1312 38.134 -30.938 -47.813 1.00 63.95 N
ATOM 18 C4 U B1312 39.274 -30.522 -47.170 1.00 61.98 C
ATOM 19 O4 U B1312 39.426 -29.319 -46.922 1.00 61.35 O
ATOM 20 C5 U B1312 40.177 -31.581 -46.815 1.00 58.39 C
ATOM 21 C6 U B1312 39.868 -32.849 -47.119 1.00 56.41 C
ATOM 22 P G B1313 41.032 -36.215 -51.837 1.00 51.64 P
ATOM 23 OP1 G B1313 41.072 -37.408 -52.730 1.00 50.60 O
ATOM 24 OP2 G B1313 42.304 -35.665 -51.281 1.00 50.97 O
ATOM 25 O5' G B1313 40.279 -35.025 -52.592 1.00 53.01 O
TER
ATOM 2 P G A1313 41.032 -36.215 -51.837 1.00 51.64 P
ATOM 3 OP1 G A1313 41.072 -37.408 -52.730 1.00 50.60 O
ATOM 4 OP2 G A1313 42.304 -35.665 -51.281 1.00 50.97 O
ATOM 5 O5' G A1313 40.279 -35.025 -52.592 1.00 53.01 O
ATOM 6 C5' G A1313 39.056 -35.236 -53.287 1.00 50.77 C
ATOM 7 C4' G A1313 38.422 -33.905 -53.617 1.00 59.53 C
ATOM 8 O4' G A1313 38.067 -33.228 -52.382 1.00 53.97 O
ATOM 9 C3' G A1313 39.322 -32.941 -54.376 1.00 61.98 C
ATOM 10 O3' G A1313 39.160 -33.152 -55.779 1.00 63.87 O
ATOM 11 C2' G A1313 38.818 -31.575 -53.915 1.00 56.48 C
ATOM 12 O2' G A1313 37.686 -31.147 -54.648 1.00 57.85 O
ATOM 13 C1' G A1313 38.419 -31.865 -52.461 1.00 54.41 C
ATOM 14 N9 G A1313 39.507 -31.684 -51.510 1.00 60.46 N
ATOM 15 C8 G A1313 40.406 -32.654 -51.114 1.00 62.62 C
ATOM 16 N7 G A1313 41.285 -32.220 -50.257 1.00 65.56 N
ATOM 17 C5 G A1313 40.951 -30.888 -50.071 1.00 64.49 C
ATOM 18 C6 G A1313 41.549 -29.906 -49.256 1.00 65.74 C
ATOM 19 O6 G A1313 42.520 -30.031 -48.476 1.00 66.19 O
ATOM 20 N1 G A1313 40.907 -28.682 -49.387 1.00 63.10 N
ATOM 21 C2 G A1313 39.822 -28.442 -50.187 1.00 58.23 C
ATOM 22 N2 G A1313 39.372 -27.191 -50.188 1.00 63.39 N
ATOM 23 N3 G A1313 39.234 -29.353 -50.933 1.00 57.09 N
ATOM 24 C4 G A1313 39.850 -30.543 -50.837 1.00 62.10 C
ATOM 25 P A A1314 40.204 -32.521 -56.828 1.00 72.84 P
ATOM 26 OP1 A A1314 40.813 -33.626 -57.606 1.00 71.86 O
ATOM 27 OP2 A A1314 41.082 -31.540 -56.143 1.00 68.73 O
ATOM 28 O5' A A1314 39.259 -31.725 -57.819 1.00 67.43 O
TER
ATOM 1 O3' G B1311 42.722 -35.966 -44.923 1.00 47.30 O
ATOM 2 P U B1312 43.279 -35.440 -46.346 1.00 49.97 P
ATOM 3 OP1 U B1312 44.226 -36.444 -46.864 1.00 43.10 O
ATOM 4 OP2 U B1312 43.741 -34.030 -46.186 1.00 61.24 O
ATOM 5 O5' U B1312 41.993 -35.465 -47.300 1.00 48.54 O
ATOM 6 C5' U B1312 41.223 -36.658 -47.471 1.00 56.87 C
ATOM 7 C4' U B1312 39.909 -36.345 -48.149 1.00 50.75 C
ATOM 8 O4' U B1312 39.149 -35.454 -47.298 1.00 56.09 O
ATOM 9 C3' U B1312 39.976 -35.635 -49.496 1.00 51.49 C
ATOM 10 O3' U B1312 40.092 -36.557 -50.574 1.00 55.82 O
ATOM 11 C2' U B1312 38.628 -34.930 -49.568 1.00 56.56 C
ATOM 12 O2' U B1312 37.607 -35.779 -50.064 1.00 58.13 O
ATOM 13 C1' U B1312 38.371 -34.589 -48.097 1.00 56.10 C
ATOM 14 N1 U B1312 38.700 -33.195 -47.762 1.00 56.55 N
ATOM 15 C2 U B1312 37.782 -32.227 -48.127 1.00 60.14 C
ATOM 16 O2 U B1312 36.727 -32.495 -48.681 1.00 61.08 O
ATOM 17 N3 U B1312 38.134 -30.938 -47.813 1.00 63.95 N
ATOM 18 C4 U B1312 39.274 -30.522 -47.170 1.00 61.98 C
ATOM 19 O4 U B1312 39.426 -29.319 -46.922 1.00 61.35 O
ATOM 20 C5 U B1312 40.177 -31.581 -46.815 1.00 58.39 C
ATOM 21 C6 U B1312 39.868 -32.849 -47.119 1.00 56.41 C
ATOM 22 P G B1313 41.032 -36.215 -51.837 1.00 51.64 P
ATOM 23 OP1 G B1313 41.072 -37.408 -52.730 1.00 50.60 O
ATOM 24 OP2 G B1313 42.304 -35.665 -51.281 1.00 50.97 O
ATOM 25 O5' G B1313 40.279 -35.025 -52.592 1.00 53.01 O
TER
Atoms:
OP1: (41.072,-37.408,-52.730)
OP2: (42.304,-35.665,-51.281)
C3': (39.322,-32.941,-54.376)
C1': (38.419,-31.865,-52.461)
C5': (39.056,-35.236,-53.287)
O6: (42.520,-30.031,-48.476)
O4': (38.067,-33.228,-52.382)
C8: (40.406,-32.654,-51.114)
C2: (39.822,-28.442,-50.187)
C6: (41.549,-29.906,-49.256)
C5: (40.951,-30.888,-50.071)
C4: (39.850,-30.543,-50.837)
P: (41.032,-36.215,-51.837)
C4': (38.422,-33.905,-53.617)
C2': (38.818,-31.575,-53.915)
O2': (37.686,-31.147,-54.648)
N1: (40.907,-28.682,-49.387)
N2: (39.372,-27.191,-50.188)
N3: (39.234,-29.353,-50.933)
N7: (41.285,-32.220,-50.257)
N9: (39.507,-31.684,-51.510)
O5': (40.279,-35.025,-52.592)
O3': (39.160,-33.152,-55.779)
OP2: (42.304,-35.665,-51.281)
C3': (39.322,-32.941,-54.376)
C1': (38.419,-31.865,-52.461)
C5': (39.056,-35.236,-53.287)
O6: (42.520,-30.031,-48.476)
O4': (38.067,-33.228,-52.382)
C8: (40.406,-32.654,-51.114)
C2: (39.822,-28.442,-50.187)
C6: (41.549,-29.906,-49.256)
C5: (40.951,-30.888,-50.071)
C4: (39.850,-30.543,-50.837)
P: (41.032,-36.215,-51.837)
C4': (38.422,-33.905,-53.617)
C2': (38.818,-31.575,-53.915)
O2': (37.686,-31.147,-54.648)
N1: (40.907,-28.682,-49.387)
N2: (39.372,-27.191,-50.188)
N3: (39.234,-29.353,-50.933)
N7: (41.285,-32.220,-50.257)
N9: (39.507,-31.684,-51.510)
O5': (40.279,-35.025,-52.592)
O3': (39.160,-33.152,-55.779)
C4: (39.274,-30.522,-47.170)
N3: (38.134,-30.938,-47.813)
OP1: (44.226,-36.444,-46.864)
OP2: (43.741,-34.030,-46.186)
C2: (37.782,-32.227,-48.127)
C1': (38.371,-34.589,-48.097)
C3': (39.976,-35.635,-49.496)
O5': (41.993,-35.465,-47.300)
O4': (39.149,-35.454,-47.298)
C5': (41.223,-36.658,-47.471)
P: (43.279,-35.440,-46.346)
C4': (39.909,-36.345,-48.149)
C2': (38.628,-34.930,-49.568)
O2': (37.607,-35.779,-50.064)
N1: (38.700,-33.195,-47.762)
O4: (39.426,-29.319,-46.922)
O2: (36.727,-32.495,-48.681)
C6: (39.868,-32.849,-47.119)
C5: (40.177,-31.581,-46.815)
O3': (40.092,-36.557,-50.574)
N3: (38.134,-30.938,-47.813)
OP1: (44.226,-36.444,-46.864)
OP2: (43.741,-34.030,-46.186)
C2: (37.782,-32.227,-48.127)
C1': (38.371,-34.589,-48.097)
C3': (39.976,-35.635,-49.496)
O5': (41.993,-35.465,-47.300)
O4': (39.149,-35.454,-47.298)
C5': (41.223,-36.658,-47.471)
P: (43.279,-35.440,-46.346)
C4': (39.909,-36.345,-48.149)
C2': (38.628,-34.930,-49.568)
O2': (37.607,-35.779,-50.064)
N1: (38.700,-33.195,-47.762)
O4: (39.426,-29.319,-46.922)
O2: (36.727,-32.495,-48.681)
C6: (39.868,-32.849,-47.119)
C5: (40.177,-31.581,-46.815)
O3': (40.092,-36.557,-50.574)
Image (generated by PyMOL):