Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A652:A651
Extra
PDB:
ATOM 1 O3' U A 651 -40.902 57.265 -16.921 1.00 47.10 O
ATOM 2 P G A 652 -41.274 56.270 -15.699 1.00 26.93 P
ATOM 3 OP1 G A 652 -42.589 56.711 -15.169 1.00 26.93 O
ATOM 4 OP2 G A 652 -40.113 56.230 -14.774 1.00 26.93 O
ATOM 5 O5' G A 652 -41.417 54.866 -16.430 1.00 26.93 O
ATOM 6 C5' G A 652 -42.493 54.632 -17.320 1.00 26.93 C
ATOM 7 C4' G A 652 -42.400 53.277 -17.969 1.00 26.93 C
ATOM 8 O4' G A 652 -41.381 53.297 -19.004 1.00 26.93 O
ATOM 9 C3' G A 652 -42.001 52.115 -17.065 1.00 26.93 C
ATOM 10 O3' G A 652 -43.082 51.611 -16.294 1.00 26.93 O
ATOM 11 C2' G A 652 -41.451 51.119 -18.070 1.00 26.93 C
ATOM 12 O2' G A 652 -42.504 50.472 -18.767 1.00 26.93 O
ATOM 13 C1' G A 652 -40.721 52.054 -19.043 1.00 26.93 C
ATOM 14 N9 G A 652 -39.325 52.267 -18.640 1.00 26.52 N
ATOM 15 C8 G A 652 -38.745 53.398 -18.145 1.00 26.52 C
ATOM 16 N7 G A 652 -37.492 53.231 -17.860 1.00 26.52 N
ATOM 17 C5 G A 652 -37.239 51.909 -18.172 1.00 26.52 C
ATOM 18 C6 G A 652 -36.053 51.127 -18.075 1.00 26.52 C
ATOM 19 O6 G A 652 -34.920 51.427 -17.694 1.00 26.52 O
ATOM 20 N1 G A 652 -36.259 49.826 -18.500 1.00 26.52 N
ATOM 21 C2 G A 652 -37.452 49.324 -18.955 1.00 26.52 C
ATOM 22 N2 G A 652 -37.416 48.033 -19.302 1.00 26.52 N
ATOM 23 N3 G A 652 -38.570 50.029 -19.061 1.00 26.52 N
ATOM 24 C4 G A 652 -38.373 51.302 -18.654 1.00 26.52 C
ATOM 25 P A A 653 -42.921 51.386 -14.704 1.00 28.19 P
ATOM 26 OP1 A A 653 -44.271 51.069 -14.165 1.00 28.19 O
ATOM 27 OP2 A A 653 -42.189 52.561 -14.156 1.00 28.19 O
ATOM 28 O5' A A 653 -41.987 50.106 -14.626 1.00 28.19 O
TER
ATOM 1 O3' U B 650 -34.941 60.845 -17.911 1.00 42.66 O
ATOM 2 P U B 651 -35.771 60.630 -16.559 1.00 47.10 P
ATOM 3 OP1 U B 651 -36.536 61.881 -16.301 1.00 47.10 O
ATOM 4 OP2 U B 651 -34.817 60.154 -15.531 1.00 47.10 O
ATOM 5 O5' U B 651 -36.777 59.468 -16.968 1.00 47.10 O
ATOM 6 C5' U B 651 -37.961 59.243 -16.214 1.00 47.10 C
ATOM 7 C4' U B 651 -39.166 58.971 -17.088 1.00 47.10 C
ATOM 8 O4' U B 651 -38.946 59.520 -18.417 1.00 47.10 O
ATOM 9 C3' U B 651 -39.531 57.487 -17.275 1.00 47.10 C
ATOM 10 O3' U B 651 -40.902 57.265 -16.921 1.00 47.10 O
ATOM 11 C2' U B 651 -39.312 57.235 -18.779 1.00 47.10 C
ATOM 12 O2' U B 651 -40.211 56.320 -19.370 1.00 47.10 O
ATOM 13 C1' U B 651 -39.469 58.627 -19.377 1.00 47.10 C
ATOM 14 N1 U B 651 -38.738 58.805 -20.656 1.00 47.10 N
ATOM 15 C2 U B 651 -39.318 59.514 -21.715 1.00 47.10 C
ATOM 16 O2 U B 651 -40.413 60.073 -21.679 1.00 47.10 O
ATOM 17 N3 U B 651 -38.545 59.575 -22.847 1.00 47.10 N
ATOM 18 C4 U B 651 -37.305 59.007 -23.030 1.00 47.10 C
ATOM 19 O4 U B 651 -36.734 59.152 -24.109 1.00 47.10 O
ATOM 20 C5 U B 651 -36.785 58.286 -21.912 1.00 47.10 C
ATOM 21 C6 U B 651 -37.509 58.206 -20.797 1.00 47.10 C
ATOM 22 P G B 652 -41.274 56.270 -15.699 1.00 26.93 P
ATOM 23 OP1 G B 652 -42.589 56.711 -15.169 1.00 26.93 O
ATOM 24 OP2 G B 652 -40.113 56.230 -14.774 1.00 26.93 O
ATOM 25 O5' G B 652 -41.417 54.866 -16.430 1.00 26.93 O
TER
ATOM 2 P G A 652 -41.274 56.270 -15.699 1.00 26.93 P
ATOM 3 OP1 G A 652 -42.589 56.711 -15.169 1.00 26.93 O
ATOM 4 OP2 G A 652 -40.113 56.230 -14.774 1.00 26.93 O
ATOM 5 O5' G A 652 -41.417 54.866 -16.430 1.00 26.93 O
ATOM 6 C5' G A 652 -42.493 54.632 -17.320 1.00 26.93 C
ATOM 7 C4' G A 652 -42.400 53.277 -17.969 1.00 26.93 C
ATOM 8 O4' G A 652 -41.381 53.297 -19.004 1.00 26.93 O
ATOM 9 C3' G A 652 -42.001 52.115 -17.065 1.00 26.93 C
ATOM 10 O3' G A 652 -43.082 51.611 -16.294 1.00 26.93 O
ATOM 11 C2' G A 652 -41.451 51.119 -18.070 1.00 26.93 C
ATOM 12 O2' G A 652 -42.504 50.472 -18.767 1.00 26.93 O
ATOM 13 C1' G A 652 -40.721 52.054 -19.043 1.00 26.93 C
ATOM 14 N9 G A 652 -39.325 52.267 -18.640 1.00 26.52 N
ATOM 15 C8 G A 652 -38.745 53.398 -18.145 1.00 26.52 C
ATOM 16 N7 G A 652 -37.492 53.231 -17.860 1.00 26.52 N
ATOM 17 C5 G A 652 -37.239 51.909 -18.172 1.00 26.52 C
ATOM 18 C6 G A 652 -36.053 51.127 -18.075 1.00 26.52 C
ATOM 19 O6 G A 652 -34.920 51.427 -17.694 1.00 26.52 O
ATOM 20 N1 G A 652 -36.259 49.826 -18.500 1.00 26.52 N
ATOM 21 C2 G A 652 -37.452 49.324 -18.955 1.00 26.52 C
ATOM 22 N2 G A 652 -37.416 48.033 -19.302 1.00 26.52 N
ATOM 23 N3 G A 652 -38.570 50.029 -19.061 1.00 26.52 N
ATOM 24 C4 G A 652 -38.373 51.302 -18.654 1.00 26.52 C
ATOM 25 P A A 653 -42.921 51.386 -14.704 1.00 28.19 P
ATOM 26 OP1 A A 653 -44.271 51.069 -14.165 1.00 28.19 O
ATOM 27 OP2 A A 653 -42.189 52.561 -14.156 1.00 28.19 O
ATOM 28 O5' A A 653 -41.987 50.106 -14.626 1.00 28.19 O
TER
ATOM 1 O3' U B 650 -34.941 60.845 -17.911 1.00 42.66 O
ATOM 2 P U B 651 -35.771 60.630 -16.559 1.00 47.10 P
ATOM 3 OP1 U B 651 -36.536 61.881 -16.301 1.00 47.10 O
ATOM 4 OP2 U B 651 -34.817 60.154 -15.531 1.00 47.10 O
ATOM 5 O5' U B 651 -36.777 59.468 -16.968 1.00 47.10 O
ATOM 6 C5' U B 651 -37.961 59.243 -16.214 1.00 47.10 C
ATOM 7 C4' U B 651 -39.166 58.971 -17.088 1.00 47.10 C
ATOM 8 O4' U B 651 -38.946 59.520 -18.417 1.00 47.10 O
ATOM 9 C3' U B 651 -39.531 57.487 -17.275 1.00 47.10 C
ATOM 10 O3' U B 651 -40.902 57.265 -16.921 1.00 47.10 O
ATOM 11 C2' U B 651 -39.312 57.235 -18.779 1.00 47.10 C
ATOM 12 O2' U B 651 -40.211 56.320 -19.370 1.00 47.10 O
ATOM 13 C1' U B 651 -39.469 58.627 -19.377 1.00 47.10 C
ATOM 14 N1 U B 651 -38.738 58.805 -20.656 1.00 47.10 N
ATOM 15 C2 U B 651 -39.318 59.514 -21.715 1.00 47.10 C
ATOM 16 O2 U B 651 -40.413 60.073 -21.679 1.00 47.10 O
ATOM 17 N3 U B 651 -38.545 59.575 -22.847 1.00 47.10 N
ATOM 18 C4 U B 651 -37.305 59.007 -23.030 1.00 47.10 C
ATOM 19 O4 U B 651 -36.734 59.152 -24.109 1.00 47.10 O
ATOM 20 C5 U B 651 -36.785 58.286 -21.912 1.00 47.10 C
ATOM 21 C6 U B 651 -37.509 58.206 -20.797 1.00 47.10 C
ATOM 22 P G B 652 -41.274 56.270 -15.699 1.00 26.93 P
ATOM 23 OP1 G B 652 -42.589 56.711 -15.169 1.00 26.93 O
ATOM 24 OP2 G B 652 -40.113 56.230 -14.774 1.00 26.93 O
ATOM 25 O5' G B 652 -41.417 54.866 -16.430 1.00 26.93 O
TER
Atoms:
OP1: (-42.589,56.711,-15.169)
OP2: (-40.113,56.230,-14.774)
C3': (-42.001,52.115,-17.065)
C1': (-40.721,52.054,-19.043)
C5': (-42.493,54.632,-17.320)
O6: (-34.920,51.427,-17.694)
O4': (-41.381,53.297,-19.004)
C8: (-38.745,53.398,-18.145)
C2: (-37.452,49.324,-18.955)
C6: (-36.053,51.127,-18.075)
C5: (-37.239,51.909,-18.172)
C4: (-38.373,51.302,-18.654)
P: (-41.274,56.270,-15.699)
C4': (-42.400,53.277,-17.969)
C2': (-41.451,51.119,-18.070)
O2': (-42.504,50.472,-18.767)
N1: (-36.259,49.826,-18.500)
N2: (-37.416,48.033,-19.302)
N3: (-38.570,50.029,-19.061)
N7: (-37.492,53.231,-17.860)
N9: (-39.325,52.267,-18.640)
O5': (-41.417,54.866,-16.430)
O3': (-43.082,51.611,-16.294)
OP2: (-40.113,56.230,-14.774)
C3': (-42.001,52.115,-17.065)
C1': (-40.721,52.054,-19.043)
C5': (-42.493,54.632,-17.320)
O6: (-34.920,51.427,-17.694)
O4': (-41.381,53.297,-19.004)
C8: (-38.745,53.398,-18.145)
C2: (-37.452,49.324,-18.955)
C6: (-36.053,51.127,-18.075)
C5: (-37.239,51.909,-18.172)
C4: (-38.373,51.302,-18.654)
P: (-41.274,56.270,-15.699)
C4': (-42.400,53.277,-17.969)
C2': (-41.451,51.119,-18.070)
O2': (-42.504,50.472,-18.767)
N1: (-36.259,49.826,-18.500)
N2: (-37.416,48.033,-19.302)
N3: (-38.570,50.029,-19.061)
N7: (-37.492,53.231,-17.860)
N9: (-39.325,52.267,-18.640)
O5': (-41.417,54.866,-16.430)
O3': (-43.082,51.611,-16.294)
C4: (-37.305,59.007,-23.030)
N3: (-38.545,59.575,-22.847)
OP1: (-36.536,61.881,-16.301)
OP2: (-34.817,60.154,-15.531)
C2: (-39.318,59.514,-21.715)
C1': (-39.469,58.627,-19.377)
C3': (-39.531,57.487,-17.275)
O5': (-36.777,59.468,-16.968)
O4': (-38.946,59.520,-18.417)
C5': (-37.961,59.243,-16.214)
P: (-35.771,60.630,-16.559)
C4': (-39.166,58.971,-17.088)
C2': (-39.312,57.235,-18.779)
O2': (-40.211,56.320,-19.370)
N1: (-38.738,58.805,-20.656)
O4: (-36.734,59.152,-24.109)
O2: (-40.413,60.073,-21.679)
C6: (-37.509,58.206,-20.797)
C5: (-36.785,58.286,-21.912)
O3': (-40.902,57.265,-16.921)
N3: (-38.545,59.575,-22.847)
OP1: (-36.536,61.881,-16.301)
OP2: (-34.817,60.154,-15.531)
C2: (-39.318,59.514,-21.715)
C1': (-39.469,58.627,-19.377)
C3': (-39.531,57.487,-17.275)
O5': (-36.777,59.468,-16.968)
O4': (-38.946,59.520,-18.417)
C5': (-37.961,59.243,-16.214)
P: (-35.771,60.630,-16.559)
C4': (-39.166,58.971,-17.088)
C2': (-39.312,57.235,-18.779)
O2': (-40.211,56.320,-19.370)
N1: (-38.738,58.805,-20.656)
O4: (-36.734,59.152,-24.109)
O2: (-40.413,60.073,-21.679)
C6: (-37.509,58.206,-20.797)
C5: (-36.785,58.286,-21.912)
O3': (-40.902,57.265,-16.921)
Image (generated by PyMOL):