Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12196:13059
Extra
PDB:
ATOM 1 O3' U A2195 52.487 36.116 59.774 1.00 38.88 O
ATOM 2 P C A2196 51.149 35.787 60.627 1.00 39.79 P
ATOM 3 OP1 C A2196 51.565 35.709 62.037 1.00 39.77 O
ATOM 4 OP2 C A2196 50.484 34.608 60.003 1.00 39.47 O
ATOM 5 O5' C A2196 50.267 37.072 60.428 1.00 40.14 O
ATOM 6 C5' C A2196 50.156 38.001 61.464 1.00 40.39 C
ATOM 7 C4' C A2196 49.000 38.909 61.227 1.00 40.65 C
ATOM 8 O4' C A2196 48.975 39.307 59.840 1.00 40.78 O
ATOM 9 C3' C A2196 47.632 38.304 61.432 1.00 40.46 C
ATOM 10 O3' C A2196 47.287 38.194 62.789 1.00 40.43 O
ATOM 11 C2' C A2196 46.763 39.260 60.667 1.00 40.75 C
ATOM 12 O2' C A2196 46.638 40.457 61.402 1.00 41.10 O
ATOM 13 C1' C A2196 47.651 39.544 59.454 1.00 40.85 C
ATOM 14 N1 C A2196 47.360 38.675 58.320 1.00 40.62 N
ATOM 15 C2 C A2196 46.242 38.909 57.480 1.00 40.71 C
ATOM 16 O2 C A2196 45.467 39.845 57.752 1.00 40.99 O
ATOM 17 N3 C A2196 46.029 38.116 56.413 1.00 40.52 N
ATOM 18 C4 C A2196 46.912 37.168 56.214 1.00 40.25 C
ATOM 19 N4 C A2196 46.736 36.386 55.183 1.00 40.08 N
ATOM 20 C5 C A2196 48.050 36.937 57.031 1.00 40.16 C
ATOM 21 C6 C A2196 48.269 37.703 58.086 1.00 40.34 C
ATOM 22 P A A2197 46.187 37.138 63.227 1.00 40.28 P
ATOM 23 OP1 A A2197 46.156 37.138 64.703 1.00 40.29 O
ATOM 24 OP2 A A2197 46.475 35.857 62.520 1.00 39.92 O
ATOM 25 O5' A A2197 44.862 37.808 62.667 1.00 40.48 O
TER
ATOM 1 O3' U B3058 39.355 48.186 57.979 1.00 42.83 O
ATOM 2 P A B3059 38.584 47.276 59.086 1.00 47.63 P
ATOM 3 OP1 A B3059 38.631 45.893 58.575 1.00 47.17 O
ATOM 4 OP2 A B3059 37.272 47.891 59.345 1.00 47.90 O
ATOM 5 O5' A B3059 39.513 47.412 60.378 1.00 47.62 O
ATOM 6 C5' A B3059 39.032 47.948 61.596 1.00 47.81 C
ATOM 7 C4' A B3059 39.661 47.249 62.759 1.00 47.54 C
ATOM 8 O4' A B3059 39.476 45.822 62.615 1.00 47.05 O
ATOM 9 C3' A B3059 41.162 47.408 62.900 1.00 47.54 C
ATOM 10 O3' A B3059 41.510 48.558 63.605 1.00 47.95 O
ATOM 11 C2' A B3059 41.564 46.170 63.640 1.00 47.11 C
ATOM 12 O2' A B3059 41.327 46.342 65.014 1.00 47.19 O
ATOM 13 C1' A B3059 40.592 45.139 63.106 1.00 46.78 C
ATOM 14 N9 A B3059 41.167 44.388 62.009 1.00 46.51 N
ATOM 15 C8 A B3059 40.618 44.283 60.782 1.00 46.50 C
ATOM 16 N7 A B3059 41.332 43.570 59.951 1.00 46.26 N
ATOM 17 C5 A B3059 42.425 43.200 60.704 1.00 46.10 C
ATOM 18 C6 A B3059 43.533 42.447 60.400 1.00 45.84 C
ATOM 19 N6 A B3059 43.741 41.882 59.238 1.00 45.68 N
ATOM 20 N1 A B3059 44.432 42.269 61.344 1.00 45.76 N
ATOM 21 C2 A B3059 44.255 42.807 62.545 1.00 45.93 C
ATOM 22 N3 A B3059 43.260 43.536 62.970 1.00 46.18 N
ATOM 23 C4 A B3059 42.348 43.694 61.984 1.00 46.25 C
ATOM 24 P C B3060 42.670 49.503 63.067 1.00 43.89 P
ATOM 25 OP1 C B3060 42.726 50.658 63.985 1.00 44.32 O
ATOM 26 OP2 C B3060 42.424 49.731 61.627 1.00 43.98 O
ATOM 27 O5' C B3060 43.953 48.631 63.229 1.00 43.55 O
TER
ATOM 2 P C A2196 51.149 35.787 60.627 1.00 39.79 P
ATOM 3 OP1 C A2196 51.565 35.709 62.037 1.00 39.77 O
ATOM 4 OP2 C A2196 50.484 34.608 60.003 1.00 39.47 O
ATOM 5 O5' C A2196 50.267 37.072 60.428 1.00 40.14 O
ATOM 6 C5' C A2196 50.156 38.001 61.464 1.00 40.39 C
ATOM 7 C4' C A2196 49.000 38.909 61.227 1.00 40.65 C
ATOM 8 O4' C A2196 48.975 39.307 59.840 1.00 40.78 O
ATOM 9 C3' C A2196 47.632 38.304 61.432 1.00 40.46 C
ATOM 10 O3' C A2196 47.287 38.194 62.789 1.00 40.43 O
ATOM 11 C2' C A2196 46.763 39.260 60.667 1.00 40.75 C
ATOM 12 O2' C A2196 46.638 40.457 61.402 1.00 41.10 O
ATOM 13 C1' C A2196 47.651 39.544 59.454 1.00 40.85 C
ATOM 14 N1 C A2196 47.360 38.675 58.320 1.00 40.62 N
ATOM 15 C2 C A2196 46.242 38.909 57.480 1.00 40.71 C
ATOM 16 O2 C A2196 45.467 39.845 57.752 1.00 40.99 O
ATOM 17 N3 C A2196 46.029 38.116 56.413 1.00 40.52 N
ATOM 18 C4 C A2196 46.912 37.168 56.214 1.00 40.25 C
ATOM 19 N4 C A2196 46.736 36.386 55.183 1.00 40.08 N
ATOM 20 C5 C A2196 48.050 36.937 57.031 1.00 40.16 C
ATOM 21 C6 C A2196 48.269 37.703 58.086 1.00 40.34 C
ATOM 22 P A A2197 46.187 37.138 63.227 1.00 40.28 P
ATOM 23 OP1 A A2197 46.156 37.138 64.703 1.00 40.29 O
ATOM 24 OP2 A A2197 46.475 35.857 62.520 1.00 39.92 O
ATOM 25 O5' A A2197 44.862 37.808 62.667 1.00 40.48 O
TER
ATOM 1 O3' U B3058 39.355 48.186 57.979 1.00 42.83 O
ATOM 2 P A B3059 38.584 47.276 59.086 1.00 47.63 P
ATOM 3 OP1 A B3059 38.631 45.893 58.575 1.00 47.17 O
ATOM 4 OP2 A B3059 37.272 47.891 59.345 1.00 47.90 O
ATOM 5 O5' A B3059 39.513 47.412 60.378 1.00 47.62 O
ATOM 6 C5' A B3059 39.032 47.948 61.596 1.00 47.81 C
ATOM 7 C4' A B3059 39.661 47.249 62.759 1.00 47.54 C
ATOM 8 O4' A B3059 39.476 45.822 62.615 1.00 47.05 O
ATOM 9 C3' A B3059 41.162 47.408 62.900 1.00 47.54 C
ATOM 10 O3' A B3059 41.510 48.558 63.605 1.00 47.95 O
ATOM 11 C2' A B3059 41.564 46.170 63.640 1.00 47.11 C
ATOM 12 O2' A B3059 41.327 46.342 65.014 1.00 47.19 O
ATOM 13 C1' A B3059 40.592 45.139 63.106 1.00 46.78 C
ATOM 14 N9 A B3059 41.167 44.388 62.009 1.00 46.51 N
ATOM 15 C8 A B3059 40.618 44.283 60.782 1.00 46.50 C
ATOM 16 N7 A B3059 41.332 43.570 59.951 1.00 46.26 N
ATOM 17 C5 A B3059 42.425 43.200 60.704 1.00 46.10 C
ATOM 18 C6 A B3059 43.533 42.447 60.400 1.00 45.84 C
ATOM 19 N6 A B3059 43.741 41.882 59.238 1.00 45.68 N
ATOM 20 N1 A B3059 44.432 42.269 61.344 1.00 45.76 N
ATOM 21 C2 A B3059 44.255 42.807 62.545 1.00 45.93 C
ATOM 22 N3 A B3059 43.260 43.536 62.970 1.00 46.18 N
ATOM 23 C4 A B3059 42.348 43.694 61.984 1.00 46.25 C
ATOM 24 P C B3060 42.670 49.503 63.067 1.00 43.89 P
ATOM 25 OP1 C B3060 42.726 50.658 63.985 1.00 44.32 O
ATOM 26 OP2 C B3060 42.424 49.731 61.627 1.00 43.98 O
ATOM 27 O5' C B3060 43.953 48.631 63.229 1.00 43.55 O
TER
Atoms:
C2: (46.242,38.909,57.480)
OP1: (51.565,35.709,62.037)
OP2: (50.484,34.608,60.003)
C4: (46.912,37.168,56.214)
O5': (50.267,37.072,60.428)
C3': (47.632,38.304,61.432)
C1': (47.651,39.544,59.454)
O4': (48.975,39.307,59.840)
C5': (50.156,38.001,61.464)
P: (51.149,35.787,60.627)
O2: (45.467,39.845,57.752)
C4': (49.000,38.909,61.227)
C2': (46.763,39.260,60.667)
O2': (46.638,40.457,61.402)
N1: (47.360,38.675,58.320)
N3: (46.029,38.116,56.413)
N4: (46.736,36.386,55.183)
C6: (48.269,37.703,58.086)
C5: (48.050,36.937,57.031)
O3': (47.287,38.194,62.789)
OP1: (51.565,35.709,62.037)
OP2: (50.484,34.608,60.003)
C4: (46.912,37.168,56.214)
O5': (50.267,37.072,60.428)
C3': (47.632,38.304,61.432)
C1': (47.651,39.544,59.454)
O4': (48.975,39.307,59.840)
C5': (50.156,38.001,61.464)
P: (51.149,35.787,60.627)
O2: (45.467,39.845,57.752)
C4': (49.000,38.909,61.227)
C2': (46.763,39.260,60.667)
O2': (46.638,40.457,61.402)
N1: (47.360,38.675,58.320)
N3: (46.029,38.116,56.413)
N4: (46.736,36.386,55.183)
C6: (48.269,37.703,58.086)
C5: (48.050,36.937,57.031)
O3': (47.287,38.194,62.789)
OP1: (38.631,45.893,58.575)
OP2: (37.272,47.891,59.345)
C3': (41.162,47.408,62.900)
C1': (40.592,45.139,63.106)
C5': (39.032,47.948,61.596)
O4': (39.476,45.822,62.615)
C8: (40.618,44.283,60.782)
O2': (41.327,46.342,65.014)
C6: (43.533,42.447,60.400)
C5: (42.425,43.200,60.704)
C4: (42.348,43.694,61.984)
P: (38.584,47.276,59.086)
C4': (39.661,47.249,62.759)
C2': (41.564,46.170,63.640)
C2: (44.255,42.807,62.545)
N1: (44.432,42.269,61.344)
N3: (43.260,43.536,62.970)
N6: (43.741,41.882,59.238)
N7: (41.332,43.570,59.951)
N9: (41.167,44.388,62.009)
O5': (39.513,47.412,60.378)
O3': (41.510,48.558,63.605)
OP2: (37.272,47.891,59.345)
C3': (41.162,47.408,62.900)
C1': (40.592,45.139,63.106)
C5': (39.032,47.948,61.596)
O4': (39.476,45.822,62.615)
C8: (40.618,44.283,60.782)
O2': (41.327,46.342,65.014)
C6: (43.533,42.447,60.400)
C5: (42.425,43.200,60.704)
C4: (42.348,43.694,61.984)
P: (38.584,47.276,59.086)
C4': (39.661,47.249,62.759)
C2': (41.564,46.170,63.640)
C2: (44.255,42.807,62.545)
N1: (44.432,42.269,61.344)
N3: (43.260,43.536,62.970)
N6: (43.741,41.882,59.238)
N7: (41.332,43.570,59.951)
N9: (41.167,44.388,62.009)
O5': (39.513,47.412,60.378)
O3': (41.510,48.558,63.605)
Image (generated by PyMOL):