Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A558:A557
Extra
PDB:
ATOM 1 O3' U A 557 -63.271 117.532 206.912 1.00 0.01 O
ATOM 2 P G A 558 -63.391 118.242 205.479 1.00 13.73 P
ATOM 3 OP1 G A 558 -64.293 117.389 204.648 1.00 13.73 O
ATOM 4 OP2 G A 558 -62.007 118.497 205.007 1.00 13.73 O
ATOM 5 O5' G A 558 -64.093 119.643 205.819 1.00 13.73 O
ATOM 6 C5' G A 558 -65.496 119.755 206.017 1.00 13.73 C
ATOM 7 C4' G A 558 -65.992 121.148 205.693 1.00 13.73 C
ATOM 8 O4' G A 558 -65.505 122.092 206.684 1.00 13.73 O
ATOM 9 C3' G A 558 -65.534 121.719 204.369 1.00 13.73 C
ATOM 10 O3' G A 558 -66.357 121.316 203.297 1.00 13.73 O
ATOM 11 C2' G A 558 -65.551 123.222 204.619 1.00 13.73 C
ATOM 12 O2' G A 558 -66.858 123.747 204.492 1.00 13.73 O
ATOM 13 C1' G A 558 -65.142 123.302 206.076 1.00 13.73 C
ATOM 14 N9 G A 558 -63.704 123.443 206.202 1.00 13.62 N
ATOM 15 C8 G A 558 -62.900 122.395 206.505 1.00 13.62 C
ATOM 16 N7 G A 558 -61.655 122.733 206.543 1.00 13.62 N
ATOM 17 C5 G A 558 -61.650 124.085 206.229 1.00 13.62 C
ATOM 18 C6 G A 558 -60.554 124.970 206.125 1.00 13.62 C
ATOM 19 O6 G A 558 -59.341 124.727 206.292 1.00 13.62 O
ATOM 20 N1 G A 558 -61.012 126.243 205.800 1.00 13.62 N
ATOM 21 C2 G A 558 -62.322 126.627 205.604 1.00 13.62 C
ATOM 22 N2 G A 558 -62.517 127.923 205.287 1.00 13.62 N
ATOM 23 N3 G A 558 -63.347 125.792 205.694 1.00 13.62 N
ATOM 24 C4 G A 558 -62.929 124.548 206.011 1.00 13.62 C
ATOM 25 P C A 559 -65.748 121.169 201.827 1.00 3.42 P
ATOM 26 OP1 C A 559 -66.854 120.764 200.945 1.00 3.42 O
ATOM 27 OP2 C A 559 -64.561 120.294 201.935 1.00 3.42 O
ATOM 28 O5' C A 559 -65.306 122.648 201.488 1.00 3.42 O
TER
ATOM 1 O3' C B 556 -58.793 114.594 209.877 1.00 1.88 O
ATOM 2 P U B 557 -59.124 115.101 208.408 1.00 0.01 P
ATOM 3 OP1 U B 557 -59.804 113.986 207.692 1.00 0.01 O
ATOM 4 OP2 U B 557 -57.877 115.638 207.861 1.00 0.01 O
ATOM 5 O5' U B 557 -60.156 116.275 208.674 1.00 0.01 O
ATOM 6 C5' U B 557 -61.457 115.972 209.106 1.00 0.01 C
ATOM 7 C4' U B 557 -62.336 117.184 209.145 1.00 0.01 C
ATOM 8 O4' U B 557 -61.888 118.077 210.178 1.00 0.01 O
ATOM 9 C3' U B 557 -62.370 118.033 207.889 1.00 0.01 C
ATOM 10 O3' U B 557 -63.271 117.532 206.912 1.00 0.01 O
ATOM 11 C2' U B 557 -62.764 119.390 208.434 1.00 0.01 C
ATOM 12 O2' U B 557 -64.148 119.441 208.702 1.00 0.01 O
ATOM 13 C1' U B 557 -62.008 119.400 209.747 1.00 0.01 C
ATOM 14 N1 U B 557 -60.678 119.902 209.555 1.00 0.33 N
ATOM 15 C2 U B 557 -60.546 121.259 209.576 1.00 0.33 C
ATOM 16 O2 U B 557 -61.509 121.986 209.784 1.00 0.33 O
ATOM 17 N3 U B 557 -59.264 121.690 209.368 1.00 0.33 N
ATOM 18 C4 U B 557 -58.176 120.889 209.143 1.00 0.33 C
ATOM 19 O4 U B 557 -57.097 121.420 208.966 1.00 0.33 O
ATOM 20 C5 U B 557 -58.413 119.491 209.135 1.00 0.33 C
ATOM 21 C6 U B 557 -59.645 119.047 209.330 1.00 0.33 C
ATOM 22 P G B 558 -63.391 118.242 205.479 1.00 13.73 P
ATOM 23 OP1 G B 558 -64.293 117.389 204.648 1.00 13.73 O
ATOM 24 OP2 G B 558 -62.007 118.497 205.007 1.00 13.73 O
ATOM 25 O5' G B 558 -64.093 119.643 205.819 1.00 13.73 O
TER
ATOM 2 P G A 558 -63.391 118.242 205.479 1.00 13.73 P
ATOM 3 OP1 G A 558 -64.293 117.389 204.648 1.00 13.73 O
ATOM 4 OP2 G A 558 -62.007 118.497 205.007 1.00 13.73 O
ATOM 5 O5' G A 558 -64.093 119.643 205.819 1.00 13.73 O
ATOM 6 C5' G A 558 -65.496 119.755 206.017 1.00 13.73 C
ATOM 7 C4' G A 558 -65.992 121.148 205.693 1.00 13.73 C
ATOM 8 O4' G A 558 -65.505 122.092 206.684 1.00 13.73 O
ATOM 9 C3' G A 558 -65.534 121.719 204.369 1.00 13.73 C
ATOM 10 O3' G A 558 -66.357 121.316 203.297 1.00 13.73 O
ATOM 11 C2' G A 558 -65.551 123.222 204.619 1.00 13.73 C
ATOM 12 O2' G A 558 -66.858 123.747 204.492 1.00 13.73 O
ATOM 13 C1' G A 558 -65.142 123.302 206.076 1.00 13.73 C
ATOM 14 N9 G A 558 -63.704 123.443 206.202 1.00 13.62 N
ATOM 15 C8 G A 558 -62.900 122.395 206.505 1.00 13.62 C
ATOM 16 N7 G A 558 -61.655 122.733 206.543 1.00 13.62 N
ATOM 17 C5 G A 558 -61.650 124.085 206.229 1.00 13.62 C
ATOM 18 C6 G A 558 -60.554 124.970 206.125 1.00 13.62 C
ATOM 19 O6 G A 558 -59.341 124.727 206.292 1.00 13.62 O
ATOM 20 N1 G A 558 -61.012 126.243 205.800 1.00 13.62 N
ATOM 21 C2 G A 558 -62.322 126.627 205.604 1.00 13.62 C
ATOM 22 N2 G A 558 -62.517 127.923 205.287 1.00 13.62 N
ATOM 23 N3 G A 558 -63.347 125.792 205.694 1.00 13.62 N
ATOM 24 C4 G A 558 -62.929 124.548 206.011 1.00 13.62 C
ATOM 25 P C A 559 -65.748 121.169 201.827 1.00 3.42 P
ATOM 26 OP1 C A 559 -66.854 120.764 200.945 1.00 3.42 O
ATOM 27 OP2 C A 559 -64.561 120.294 201.935 1.00 3.42 O
ATOM 28 O5' C A 559 -65.306 122.648 201.488 1.00 3.42 O
TER
ATOM 1 O3' C B 556 -58.793 114.594 209.877 1.00 1.88 O
ATOM 2 P U B 557 -59.124 115.101 208.408 1.00 0.01 P
ATOM 3 OP1 U B 557 -59.804 113.986 207.692 1.00 0.01 O
ATOM 4 OP2 U B 557 -57.877 115.638 207.861 1.00 0.01 O
ATOM 5 O5' U B 557 -60.156 116.275 208.674 1.00 0.01 O
ATOM 6 C5' U B 557 -61.457 115.972 209.106 1.00 0.01 C
ATOM 7 C4' U B 557 -62.336 117.184 209.145 1.00 0.01 C
ATOM 8 O4' U B 557 -61.888 118.077 210.178 1.00 0.01 O
ATOM 9 C3' U B 557 -62.370 118.033 207.889 1.00 0.01 C
ATOM 10 O3' U B 557 -63.271 117.532 206.912 1.00 0.01 O
ATOM 11 C2' U B 557 -62.764 119.390 208.434 1.00 0.01 C
ATOM 12 O2' U B 557 -64.148 119.441 208.702 1.00 0.01 O
ATOM 13 C1' U B 557 -62.008 119.400 209.747 1.00 0.01 C
ATOM 14 N1 U B 557 -60.678 119.902 209.555 1.00 0.33 N
ATOM 15 C2 U B 557 -60.546 121.259 209.576 1.00 0.33 C
ATOM 16 O2 U B 557 -61.509 121.986 209.784 1.00 0.33 O
ATOM 17 N3 U B 557 -59.264 121.690 209.368 1.00 0.33 N
ATOM 18 C4 U B 557 -58.176 120.889 209.143 1.00 0.33 C
ATOM 19 O4 U B 557 -57.097 121.420 208.966 1.00 0.33 O
ATOM 20 C5 U B 557 -58.413 119.491 209.135 1.00 0.33 C
ATOM 21 C6 U B 557 -59.645 119.047 209.330 1.00 0.33 C
ATOM 22 P G B 558 -63.391 118.242 205.479 1.00 13.73 P
ATOM 23 OP1 G B 558 -64.293 117.389 204.648 1.00 13.73 O
ATOM 24 OP2 G B 558 -62.007 118.497 205.007 1.00 13.73 O
ATOM 25 O5' G B 558 -64.093 119.643 205.819 1.00 13.73 O
TER
Atoms:
OP1: (-64.293,117.389,204.648)
OP2: (-62.007,118.497,205.007)
C3': (-65.534,121.719,204.369)
C1': (-65.142,123.302,206.076)
C5': (-65.496,119.755,206.017)
O6: (-59.341,124.727,206.292)
O4': (-65.505,122.092,206.684)
C8: (-62.900,122.395,206.505)
C2: (-62.322,126.627,205.604)
C6: (-60.554,124.970,206.125)
C5: (-61.650,124.085,206.229)
C4: (-62.929,124.548,206.011)
P: (-63.391,118.242,205.479)
C4': (-65.992,121.148,205.693)
C2': (-65.551,123.222,204.619)
O2': (-66.858,123.747,204.492)
N1: (-61.012,126.243,205.800)
N2: (-62.517,127.923,205.287)
N3: (-63.347,125.792,205.694)
N7: (-61.655,122.733,206.543)
N9: (-63.704,123.443,206.202)
O5': (-64.093,119.643,205.819)
O3': (-66.357,121.316,203.297)
OP2: (-62.007,118.497,205.007)
C3': (-65.534,121.719,204.369)
C1': (-65.142,123.302,206.076)
C5': (-65.496,119.755,206.017)
O6: (-59.341,124.727,206.292)
O4': (-65.505,122.092,206.684)
C8: (-62.900,122.395,206.505)
C2: (-62.322,126.627,205.604)
C6: (-60.554,124.970,206.125)
C5: (-61.650,124.085,206.229)
C4: (-62.929,124.548,206.011)
P: (-63.391,118.242,205.479)
C4': (-65.992,121.148,205.693)
C2': (-65.551,123.222,204.619)
O2': (-66.858,123.747,204.492)
N1: (-61.012,126.243,205.800)
N2: (-62.517,127.923,205.287)
N3: (-63.347,125.792,205.694)
N7: (-61.655,122.733,206.543)
N9: (-63.704,123.443,206.202)
O5': (-64.093,119.643,205.819)
O3': (-66.357,121.316,203.297)
C4: (-58.176,120.889,209.143)
N3: (-59.264,121.690,209.368)
OP1: (-59.804,113.986,207.692)
OP2: (-57.877,115.638,207.861)
C2: (-60.546,121.259,209.576)
C1': (-62.008,119.400,209.747)
C3': (-62.370,118.033,207.889)
O5': (-60.156,116.275,208.674)
O4': (-61.888,118.077,210.178)
C5': (-61.457,115.972,209.106)
P: (-59.124,115.101,208.408)
C4': (-62.336,117.184,209.145)
C2': (-62.764,119.390,208.434)
O2': (-64.148,119.441,208.702)
N1: (-60.678,119.902,209.555)
O4: (-57.097,121.420,208.966)
O2: (-61.509,121.986,209.784)
C6: (-59.645,119.047,209.330)
C5: (-58.413,119.491,209.135)
O3': (-63.271,117.532,206.912)
N3: (-59.264,121.690,209.368)
OP1: (-59.804,113.986,207.692)
OP2: (-57.877,115.638,207.861)
C2: (-60.546,121.259,209.576)
C1': (-62.008,119.400,209.747)
C3': (-62.370,118.033,207.889)
O5': (-60.156,116.275,208.674)
O4': (-61.888,118.077,210.178)
C5': (-61.457,115.972,209.106)
P: (-59.124,115.101,208.408)
C4': (-62.336,117.184,209.145)
C2': (-62.764,119.390,208.434)
O2': (-64.148,119.441,208.702)
N1: (-60.678,119.902,209.555)
O4: (-57.097,121.420,208.966)
O2: (-61.509,121.986,209.784)
C6: (-59.645,119.047,209.330)
C5: (-58.413,119.491,209.135)
O3': (-63.271,117.532,206.912)
Image (generated by PyMOL):