ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QEX:026:0662

Extra

PDB:
ATOM 1 O3' U A 25 47.123 121.751 43.932 1.00 29.66 O
ATOM 2 P C A 26 47.814 121.573 42.498 1.00 31.14 P
ATOM 3 OP1 C A 26 48.679 120.374 42.575 1.00 27.91 O
ATOM 4 OP2 C A 26 48.391 122.876 42.099 1.00 29.23 O
ATOM 5 O5' C A 26 46.607 121.255 41.514 1.00 30.47 O
ATOM 6 C5' C A 26 45.876 120.041 41.629 1.00 30.53 C
ATOM 7 C4' C A 26 44.731 120.032 40.657 1.00 33.81 C
ATOM 8 O4' C A 26 43.855 121.156 40.928 1.00 33.86 O
ATOM 9 C3' C A 26 45.092 120.230 39.196 1.00 35.75 C
ATOM 10 O3' C A 26 45.577 119.054 38.579 1.00 37.39 O
ATOM 11 C2' C A 26 43.761 120.661 38.610 1.00 36.59 C
ATOM 12 O2' C A 26 42.861 119.577 38.493 1.00 37.73 O
ATOM 13 C1' C A 26 43.263 121.592 39.708 1.00 36.12 C
ATOM 14 N1 C A 26 43.672 122.980 39.447 1.00 36.69 N
ATOM 15 C2 C A 26 42.891 123.746 38.582 1.00 36.86 C
ATOM 16 O2 C A 26 41.900 123.226 38.058 1.00 35.29 O
ATOM 17 N3 C A 26 43.236 125.032 38.342 1.00 38.50 N
ATOM 18 C4 C A 26 44.314 125.555 38.935 1.00 38.82 C
ATOM 19 N4 C A 26 44.601 126.836 38.690 1.00 38.55 N
ATOM 20 C5 C A 26 45.139 124.790 39.811 1.00 37.84 C
ATOM 21 C6 C A 26 44.786 123.518 40.036 1.00 36.45 C
ATOM 22 P A A 27 46.590 119.181 37.343 1.00 40.90 P
ATOM 23 OP1 A A 27 47.049 117.812 37.016 1.00 38.83 O
ATOM 24 OP2 A A 27 47.592 120.235 37.647 1.00 42.14 O
ATOM 25 O5' A A 27 45.684 119.740 36.159 1.00 41.49 O
TER

ATOM 1 O3' U B 661 35.021 117.381 28.943 1.00 46.60 O
ATOM 2 P A B 662 35.309 117.925 30.430 1.00 46.74 P
ATOM 3 OP1 A B 662 34.042 118.407 31.042 1.00 44.43 O
ATOM 4 OP2 A B 662 36.481 118.832 30.354 1.00 46.05 O
ATOM 5 O5' A B 662 35.764 116.630 31.224 1.00 42.73 O
ATOM 6 C5' A B 662 36.676 115.704 30.638 1.00 41.71 C
ATOM 7 C4' A B 662 37.463 115.012 31.719 1.00 40.50 C
ATOM 8 O4' A B 662 38.356 115.973 32.345 1.00 41.01 O
ATOM 9 C3' A B 662 36.626 114.412 32.842 1.00 39.75 C
ATOM 10 O3' A B 662 37.268 113.233 33.310 1.00 39.65 O
ATOM 11 C2' A B 662 36.662 115.509 33.900 1.00 39.68 C
ATOM 12 O2' A B 662 36.490 115.010 35.208 1.00 41.42 O
ATOM 13 C1' A B 662 38.080 116.047 33.726 1.00 40.22 C
ATOM 14 N9 A B 662 38.259 117.432 34.162 1.00 38.57 N
ATOM 15 C8 A B 662 37.529 118.546 33.827 1.00 37.87 C
ATOM 16 N7 A B 662 37.928 119.643 34.429 1.00 37.57 N
ATOM 17 C5 A B 662 38.999 119.222 35.206 1.00 40.21 C
ATOM 18 C6 A B 662 39.858 119.903 36.097 1.00 40.00 C
ATOM 19 N6 A B 662 39.754 121.196 36.387 1.00 42.35 N
ATOM 20 N1 A B 662 40.833 119.189 36.695 1.00 39.53 N
ATOM 21 C2 A B 662 40.925 117.878 36.430 1.00 39.78 C
ATOM 22 N3 A B 662 40.174 117.124 35.629 1.00 39.40 N
ATOM 23 C4 A B 662 39.221 117.865 35.038 1.00 39.99 C
ATOM 24 P U B 663 36.664 111.793 32.927 1.00 40.73 P
ATOM 25 OP1 U B 663 37.505 110.777 33.606 1.00 39.33 O
ATOM 26 OP2 U B 663 36.498 111.736 31.452 1.00 40.14 O
ATOM 27 O5' U B 663 35.218 111.788 33.598 1.00 39.09 O
TER

Atoms:
C2: (42.891,123.746,38.582)
OP1: (48.679,120.374,42.575)
OP2: (48.391,122.876,42.099)
C4: (44.314,125.555,38.935)
O5': (46.607,121.255,41.514)
C3': (45.092,120.230,39.196)
C1': (43.263,121.592,39.708)
O4': (43.855,121.156,40.928)
C5': (45.876,120.041,41.629)
P: (47.814,121.573,42.498)
O2: (41.900,123.226,38.058)
C4': (44.731,120.032,40.657)
C2': (43.761,120.661,38.610)
O2': (42.861,119.577,38.493)
N1: (43.672,122.980,39.447)
N3: (43.236,125.032,38.342)
N4: (44.601,126.836,38.690)
C6: (44.786,123.518,40.036)
C5: (45.139,124.790,39.811)
O3': (45.577,119.054,38.579)
OP1: (34.042,118.407,31.042)
OP2: (36.481,118.832,30.354)
C3': (36.626,114.412,32.842)
C1': (38.080,116.047,33.726)
C5': (36.676,115.704,30.638)
O4': (38.356,115.973,32.345)
C8: (37.529,118.546,33.827)
O2': (36.490,115.010,35.208)
C6: (39.858,119.903,36.097)
C5: (38.999,119.222,35.206)
C4: (39.221,117.865,35.038)
P: (35.309,117.925,30.430)
C4': (37.463,115.012,31.719)
C2': (36.662,115.509,33.900)
C2: (40.925,117.878,36.430)
N1: (40.833,119.189,36.695)
N3: (40.174,117.124,35.629)
N6: (39.754,121.196,36.387)
N7: (37.928,119.643,34.429)
N9: (38.259,117.432,34.162)
O5': (35.764,116.630,31.224)
O3': (37.268,113.233,33.310)
Image (generated by PyMOL):
PyMOL image
show in jmol