Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1589:A1236
Extra
PDB:
ATOM 1 O3' G A1588 -38.831 -71.666 3.638 1.00 0.79 O
ATOM 2 P C A1589 -40.167 -70.999 3.019 1.00 5.21 P
ATOM 3 OP1 C A1589 -39.925 -69.545 2.820 1.00 1.59 O
ATOM 4 OP2 C A1589 -41.365 -71.440 3.768 1.00 1.59 O
ATOM 5 O5' C A1589 -40.247 -71.640 1.570 1.00 24.18 O
ATOM 6 C5' C A1589 -40.841 -72.918 1.381 1.00 24.18 C
ATOM 7 C4' C A1589 -39.861 -73.866 0.754 1.00 24.18 C
ATOM 8 O4' C A1589 -40.429 -75.177 0.916 1.00 24.18 O
ATOM 9 C3' C A1589 -39.621 -73.696 -0.742 1.00 24.18 C
ATOM 10 O3' C A1589 -38.505 -72.853 -1.021 1.00 24.18 O
ATOM 11 C2' C A1589 -39.323 -75.116 -1.182 1.00 24.18 C
ATOM 12 O2' C A1589 -37.989 -75.457 -0.883 1.00 24.18 O
ATOM 13 C1' C A1589 -40.232 -75.921 -0.258 1.00 24.18 C
ATOM 14 N1 C A1589 -41.549 -76.197 -0.838 1.00 9.84 N
ATOM 15 C2 C A1589 -41.731 -77.383 -1.511 1.00 9.84 C
ATOM 16 O2 C A1589 -40.781 -78.153 -1.608 1.00 9.84 O
ATOM 17 N3 C A1589 -42.929 -77.665 -2.050 1.00 9.84 N
ATOM 18 C4 C A1589 -43.921 -76.796 -1.943 1.00 9.84 C
ATOM 19 N4 C A1589 -45.083 -77.112 -2.505 1.00 9.84 N
ATOM 20 C5 C A1589 -43.765 -75.563 -1.257 1.00 9.84 C
ATOM 21 C6 C A1589 -42.573 -75.306 -0.720 1.00 9.84 C
ATOM 22 P G A1590 -38.179 -72.439 -2.546 1.00 13.84 P
ATOM 23 OP1 G A1590 -36.952 -71.567 -2.601 1.00 6.90 O
ATOM 24 OP2 G A1590 -39.465 -71.976 -3.171 1.00 6.90 O
ATOM 25 O5' G A1590 -37.776 -73.817 -3.226 1.00 22.32 O
TER
ATOM 1 O3' A B1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 2 P A B1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 3 OP1 A B1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 4 OP2 A B1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 5 O5' A B1236 -30.920 -82.204 -3.468 1.00 25.16 O
ATOM 6 C5' A B1236 -30.154 -81.853 -4.627 1.00 25.16 C
ATOM 7 C4' A B1236 -30.322 -80.383 -4.901 1.00 25.16 C
ATOM 8 O4' A B1236 -31.659 -80.173 -5.384 1.00 25.16 O
ATOM 9 C3' A B1236 -30.201 -79.524 -3.653 1.00 25.16 C
ATOM 10 O3' A B1236 -28.851 -79.107 -3.485 1.00 25.16 O
ATOM 11 C2' A B1236 -31.107 -78.344 -3.954 1.00 25.16 C
ATOM 12 O2' A B1236 -30.416 -77.390 -4.725 1.00 25.16 O
ATOM 13 C1' A B1236 -32.177 -78.981 -4.842 1.00 25.16 C
ATOM 14 N9 A B1236 -33.503 -79.258 -4.277 1.00 24.97 N
ATOM 15 C8 A B1236 -34.320 -80.328 -4.584 1.00 24.97 C
ATOM 16 N7 A B1236 -35.494 -80.280 -4.009 1.00 24.97 N
ATOM 17 C5 A B1236 -35.448 -79.112 -3.255 1.00 24.97 C
ATOM 18 C6 A B1236 -36.391 -78.488 -2.410 1.00 24.97 C
ATOM 19 N6 A B1236 -37.620 -78.954 -2.189 1.00 24.97 N
ATOM 20 N1 A B1236 -36.019 -77.353 -1.796 1.00 24.97 N
ATOM 21 C2 A B1236 -34.788 -76.876 -2.020 1.00 24.97 C
ATOM 22 N3 A B1236 -33.819 -77.358 -2.792 1.00 24.97 N
ATOM 23 C4 A B1236 -34.216 -78.488 -3.391 1.00 24.97 C
ATOM 24 P U B1237 -28.031 -79.569 -2.179 1.00 14.67 P
ATOM 25 OP1 U B1237 -26.627 -79.112 -2.382 1.00 35.76 O
ATOM 26 OP2 U B1237 -28.322 -81.004 -1.933 1.00 35.76 O
ATOM 27 O5' U B1237 -28.666 -78.700 -1.010 1.00 2.45 O
TER
ATOM 2 P C A1589 -40.167 -70.999 3.019 1.00 5.21 P
ATOM 3 OP1 C A1589 -39.925 -69.545 2.820 1.00 1.59 O
ATOM 4 OP2 C A1589 -41.365 -71.440 3.768 1.00 1.59 O
ATOM 5 O5' C A1589 -40.247 -71.640 1.570 1.00 24.18 O
ATOM 6 C5' C A1589 -40.841 -72.918 1.381 1.00 24.18 C
ATOM 7 C4' C A1589 -39.861 -73.866 0.754 1.00 24.18 C
ATOM 8 O4' C A1589 -40.429 -75.177 0.916 1.00 24.18 O
ATOM 9 C3' C A1589 -39.621 -73.696 -0.742 1.00 24.18 C
ATOM 10 O3' C A1589 -38.505 -72.853 -1.021 1.00 24.18 O
ATOM 11 C2' C A1589 -39.323 -75.116 -1.182 1.00 24.18 C
ATOM 12 O2' C A1589 -37.989 -75.457 -0.883 1.00 24.18 O
ATOM 13 C1' C A1589 -40.232 -75.921 -0.258 1.00 24.18 C
ATOM 14 N1 C A1589 -41.549 -76.197 -0.838 1.00 9.84 N
ATOM 15 C2 C A1589 -41.731 -77.383 -1.511 1.00 9.84 C
ATOM 16 O2 C A1589 -40.781 -78.153 -1.608 1.00 9.84 O
ATOM 17 N3 C A1589 -42.929 -77.665 -2.050 1.00 9.84 N
ATOM 18 C4 C A1589 -43.921 -76.796 -1.943 1.00 9.84 C
ATOM 19 N4 C A1589 -45.083 -77.112 -2.505 1.00 9.84 N
ATOM 20 C5 C A1589 -43.765 -75.563 -1.257 1.00 9.84 C
ATOM 21 C6 C A1589 -42.573 -75.306 -0.720 1.00 9.84 C
ATOM 22 P G A1590 -38.179 -72.439 -2.546 1.00 13.84 P
ATOM 23 OP1 G A1590 -36.952 -71.567 -2.601 1.00 6.90 O
ATOM 24 OP2 G A1590 -39.465 -71.976 -3.171 1.00 6.90 O
ATOM 25 O5' G A1590 -37.776 -73.817 -3.226 1.00 22.32 O
TER
ATOM 1 O3' A B1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 2 P A B1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 3 OP1 A B1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 4 OP2 A B1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 5 O5' A B1236 -30.920 -82.204 -3.468 1.00 25.16 O
ATOM 6 C5' A B1236 -30.154 -81.853 -4.627 1.00 25.16 C
ATOM 7 C4' A B1236 -30.322 -80.383 -4.901 1.00 25.16 C
ATOM 8 O4' A B1236 -31.659 -80.173 -5.384 1.00 25.16 O
ATOM 9 C3' A B1236 -30.201 -79.524 -3.653 1.00 25.16 C
ATOM 10 O3' A B1236 -28.851 -79.107 -3.485 1.00 25.16 O
ATOM 11 C2' A B1236 -31.107 -78.344 -3.954 1.00 25.16 C
ATOM 12 O2' A B1236 -30.416 -77.390 -4.725 1.00 25.16 O
ATOM 13 C1' A B1236 -32.177 -78.981 -4.842 1.00 25.16 C
ATOM 14 N9 A B1236 -33.503 -79.258 -4.277 1.00 24.97 N
ATOM 15 C8 A B1236 -34.320 -80.328 -4.584 1.00 24.97 C
ATOM 16 N7 A B1236 -35.494 -80.280 -4.009 1.00 24.97 N
ATOM 17 C5 A B1236 -35.448 -79.112 -3.255 1.00 24.97 C
ATOM 18 C6 A B1236 -36.391 -78.488 -2.410 1.00 24.97 C
ATOM 19 N6 A B1236 -37.620 -78.954 -2.189 1.00 24.97 N
ATOM 20 N1 A B1236 -36.019 -77.353 -1.796 1.00 24.97 N
ATOM 21 C2 A B1236 -34.788 -76.876 -2.020 1.00 24.97 C
ATOM 22 N3 A B1236 -33.819 -77.358 -2.792 1.00 24.97 N
ATOM 23 C4 A B1236 -34.216 -78.488 -3.391 1.00 24.97 C
ATOM 24 P U B1237 -28.031 -79.569 -2.179 1.00 14.67 P
ATOM 25 OP1 U B1237 -26.627 -79.112 -2.382 1.00 35.76 O
ATOM 26 OP2 U B1237 -28.322 -81.004 -1.933 1.00 35.76 O
ATOM 27 O5' U B1237 -28.666 -78.700 -1.010 1.00 2.45 O
TER
Atoms:
C2: (-41.731,-77.383,-1.511)
OP1: (-39.925,-69.545,2.820)
OP2: (-41.365,-71.440,3.768)
C4: (-43.921,-76.796,-1.943)
O5': (-40.247,-71.640,1.570)
C3': (-39.621,-73.696,-0.742)
C1': (-40.232,-75.921,-0.258)
O4': (-40.429,-75.177,0.916)
C5': (-40.841,-72.918,1.381)
P: (-40.167,-70.999,3.019)
O2: (-40.781,-78.153,-1.608)
C4': (-39.861,-73.866,0.754)
C2': (-39.323,-75.116,-1.182)
O2': (-37.989,-75.457,-0.883)
N1: (-41.549,-76.197,-0.838)
N3: (-42.929,-77.665,-2.050)
N4: (-45.083,-77.112,-2.505)
C6: (-42.573,-75.306,-0.720)
C5: (-43.765,-75.563,-1.257)
O3': (-38.505,-72.853,-1.021)
OP1: (-39.925,-69.545,2.820)
OP2: (-41.365,-71.440,3.768)
C4: (-43.921,-76.796,-1.943)
O5': (-40.247,-71.640,1.570)
C3': (-39.621,-73.696,-0.742)
C1': (-40.232,-75.921,-0.258)
O4': (-40.429,-75.177,0.916)
C5': (-40.841,-72.918,1.381)
P: (-40.167,-70.999,3.019)
O2: (-40.781,-78.153,-1.608)
C4': (-39.861,-73.866,0.754)
C2': (-39.323,-75.116,-1.182)
O2': (-37.989,-75.457,-0.883)
N1: (-41.549,-76.197,-0.838)
N3: (-42.929,-77.665,-2.050)
N4: (-45.083,-77.112,-2.505)
C6: (-42.573,-75.306,-0.720)
C5: (-43.765,-75.563,-1.257)
O3': (-38.505,-72.853,-1.021)
OP1: (-32.858,-83.703,-3.177)
OP2: (-30.652,-84.639,-4.064)
C3': (-30.201,-79.524,-3.653)
C1': (-32.177,-78.981,-4.842)
C5': (-30.154,-81.853,-4.627)
O4': (-31.659,-80.173,-5.384)
C8: (-34.320,-80.328,-4.584)
O2': (-30.416,-77.390,-4.725)
C6: (-36.391,-78.488,-2.410)
C5: (-35.448,-79.112,-3.255)
C4: (-34.216,-78.488,-3.391)
P: (-31.382,-83.695,-3.179)
C4': (-30.322,-80.383,-4.901)
C2': (-31.107,-78.344,-3.954)
C2: (-34.788,-76.876,-2.020)
N1: (-36.019,-77.353,-1.796)
N3: (-33.819,-77.358,-2.792)
N6: (-37.620,-78.954,-2.189)
N7: (-35.494,-80.280,-4.009)
N9: (-33.503,-79.258,-4.277)
O5': (-30.920,-82.204,-3.468)
O3': (-28.851,-79.107,-3.485)
OP2: (-30.652,-84.639,-4.064)
C3': (-30.201,-79.524,-3.653)
C1': (-32.177,-78.981,-4.842)
C5': (-30.154,-81.853,-4.627)
O4': (-31.659,-80.173,-5.384)
C8: (-34.320,-80.328,-4.584)
O2': (-30.416,-77.390,-4.725)
C6: (-36.391,-78.488,-2.410)
C5: (-35.448,-79.112,-3.255)
C4: (-34.216,-78.488,-3.391)
P: (-31.382,-83.695,-3.179)
C4': (-30.322,-80.383,-4.901)
C2': (-31.107,-78.344,-3.954)
C2: (-34.788,-76.876,-2.020)
N1: (-36.019,-77.353,-1.796)
N3: (-33.819,-77.358,-2.792)
N6: (-37.620,-78.954,-2.189)
N7: (-35.494,-80.280,-4.009)
N9: (-33.503,-79.258,-4.277)
O5': (-30.920,-82.204,-3.468)
O3': (-28.851,-79.107,-3.485)
Image (generated by PyMOL):