Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01416:01615
Extra
PDB:
ATOM 1 O3' C A1415 100.014 159.386 45.700 1.00 39.16 O
ATOM 2 P U A1416 99.612 157.957 45.088 1.00 40.79 P
ATOM 3 OP1 U A1416 100.647 157.609 44.080 1.00 42.58 O
ATOM 4 OP2 U A1416 98.183 158.001 44.693 1.00 41.40 O
ATOM 5 O5' U A1416 99.777 156.941 46.302 1.00 40.94 O
ATOM 6 C5' U A1416 101.078 156.468 46.683 1.00 36.82 C
ATOM 7 C4' U A1416 101.327 156.765 48.136 1.00 35.90 C
ATOM 8 O4' U A1416 100.608 157.981 48.472 1.00 37.15 O
ATOM 9 C3' U A1416 100.802 155.780 49.164 1.00 33.77 C
ATOM 10 O3' U A1416 101.683 154.681 49.334 1.00 34.21 O
ATOM 11 C2' U A1416 100.775 156.647 50.414 1.00 35.18 C
ATOM 12 O2' U A1416 102.067 156.903 50.928 1.00 35.20 O
ATOM 13 C1' U A1416 100.242 157.954 49.843 1.00 35.02 C
ATOM 14 N1 U A1416 98.781 158.060 49.954 1.00 33.95 N
ATOM 15 C2 U A1416 98.258 158.317 51.208 1.00 33.99 C
ATOM 16 O2 U A1416 98.952 158.425 52.207 1.00 33.94 O
ATOM 17 N3 U A1416 96.892 158.431 51.253 1.00 34.07 N
ATOM 18 C4 U A1416 96.013 158.305 50.198 1.00 33.15 C
ATOM 19 O4 U A1416 94.807 158.445 50.397 1.00 34.07 O
ATOM 20 C5 U A1416 96.627 158.024 48.942 1.00 33.52 C
ATOM 21 C6 U A1416 97.957 157.914 48.863 1.00 33.88 C
ATOM 22 P A A1417 101.146 153.323 50.018 1.00 33.60 P
ATOM 23 OP1 A A1417 102.280 152.367 50.055 1.00 29.63 O
ATOM 24 OP2 A A1417 99.886 152.944 49.321 1.00 34.74 O
ATOM 25 O5' A A1417 100.799 153.734 51.521 1.00 29.49 O
TER
ATOM 1 O3' A B1614 108.943 156.616 56.041 1.00 47.70 O
ATOM 2 P A B1615 109.653 157.592 54.996 1.00 46.96 P
ATOM 3 OP1 A B1615 110.982 156.995 54.690 1.00 45.19 O
ATOM 4 OP2 A B1615 109.569 158.983 55.502 1.00 45.48 O
ATOM 5 O5' A B1615 108.721 157.469 53.716 1.00 44.34 O
ATOM 6 C5' A B1615 108.495 156.189 53.118 1.00 44.05 C
ATOM 7 C4' A B1615 107.199 156.193 52.355 1.00 43.81 C
ATOM 8 O4' A B1615 106.101 156.456 53.261 1.00 43.22 O
ATOM 9 C3' A B1615 107.074 157.273 51.303 1.00 43.62 C
ATOM 10 O3' A B1615 107.733 156.864 50.118 1.00 45.09 O
ATOM 11 C2' A B1615 105.567 157.380 51.145 1.00 42.80 C
ATOM 12 O2' A B1615 105.040 156.308 50.390 1.00 45.43 O
ATOM 13 C1' A B1615 105.111 157.215 52.595 1.00 41.09 C
ATOM 14 N9 A B1615 104.961 158.474 53.316 1.00 40.03 N
ATOM 15 C8 A B1615 105.854 159.086 54.164 1.00 38.65 C
ATOM 16 N7 A B1615 105.406 160.203 54.684 1.00 38.70 N
ATOM 17 C5 A B1615 104.137 160.337 54.140 1.00 38.08 C
ATOM 18 C6 A B1615 103.133 161.302 54.308 1.00 38.97 C
ATOM 19 N6 A B1615 103.242 162.360 55.118 1.00 39.43 N
ATOM 20 N1 A B1615 101.986 161.139 53.610 1.00 40.33 N
ATOM 21 C2 A B1615 101.866 160.070 52.813 1.00 39.32 C
ATOM 22 N3 A B1615 102.732 159.091 52.583 1.00 37.10 N
ATOM 23 C4 A B1615 103.858 159.285 53.286 1.00 38.26 C
ATOM 24 P A B1616 108.428 157.956 49.177 1.00 42.96 P
ATOM 25 OP1 A B1616 109.297 157.223 48.217 1.00 42.51 O
ATOM 26 OP2 A B1616 109.007 159.024 50.037 1.00 43.12 O
ATOM 27 O5' A B1616 107.205 158.567 48.369 1.00 41.59 O
TER
ATOM 2 P U A1416 99.612 157.957 45.088 1.00 40.79 P
ATOM 3 OP1 U A1416 100.647 157.609 44.080 1.00 42.58 O
ATOM 4 OP2 U A1416 98.183 158.001 44.693 1.00 41.40 O
ATOM 5 O5' U A1416 99.777 156.941 46.302 1.00 40.94 O
ATOM 6 C5' U A1416 101.078 156.468 46.683 1.00 36.82 C
ATOM 7 C4' U A1416 101.327 156.765 48.136 1.00 35.90 C
ATOM 8 O4' U A1416 100.608 157.981 48.472 1.00 37.15 O
ATOM 9 C3' U A1416 100.802 155.780 49.164 1.00 33.77 C
ATOM 10 O3' U A1416 101.683 154.681 49.334 1.00 34.21 O
ATOM 11 C2' U A1416 100.775 156.647 50.414 1.00 35.18 C
ATOM 12 O2' U A1416 102.067 156.903 50.928 1.00 35.20 O
ATOM 13 C1' U A1416 100.242 157.954 49.843 1.00 35.02 C
ATOM 14 N1 U A1416 98.781 158.060 49.954 1.00 33.95 N
ATOM 15 C2 U A1416 98.258 158.317 51.208 1.00 33.99 C
ATOM 16 O2 U A1416 98.952 158.425 52.207 1.00 33.94 O
ATOM 17 N3 U A1416 96.892 158.431 51.253 1.00 34.07 N
ATOM 18 C4 U A1416 96.013 158.305 50.198 1.00 33.15 C
ATOM 19 O4 U A1416 94.807 158.445 50.397 1.00 34.07 O
ATOM 20 C5 U A1416 96.627 158.024 48.942 1.00 33.52 C
ATOM 21 C6 U A1416 97.957 157.914 48.863 1.00 33.88 C
ATOM 22 P A A1417 101.146 153.323 50.018 1.00 33.60 P
ATOM 23 OP1 A A1417 102.280 152.367 50.055 1.00 29.63 O
ATOM 24 OP2 A A1417 99.886 152.944 49.321 1.00 34.74 O
ATOM 25 O5' A A1417 100.799 153.734 51.521 1.00 29.49 O
TER
ATOM 1 O3' A B1614 108.943 156.616 56.041 1.00 47.70 O
ATOM 2 P A B1615 109.653 157.592 54.996 1.00 46.96 P
ATOM 3 OP1 A B1615 110.982 156.995 54.690 1.00 45.19 O
ATOM 4 OP2 A B1615 109.569 158.983 55.502 1.00 45.48 O
ATOM 5 O5' A B1615 108.721 157.469 53.716 1.00 44.34 O
ATOM 6 C5' A B1615 108.495 156.189 53.118 1.00 44.05 C
ATOM 7 C4' A B1615 107.199 156.193 52.355 1.00 43.81 C
ATOM 8 O4' A B1615 106.101 156.456 53.261 1.00 43.22 O
ATOM 9 C3' A B1615 107.074 157.273 51.303 1.00 43.62 C
ATOM 10 O3' A B1615 107.733 156.864 50.118 1.00 45.09 O
ATOM 11 C2' A B1615 105.567 157.380 51.145 1.00 42.80 C
ATOM 12 O2' A B1615 105.040 156.308 50.390 1.00 45.43 O
ATOM 13 C1' A B1615 105.111 157.215 52.595 1.00 41.09 C
ATOM 14 N9 A B1615 104.961 158.474 53.316 1.00 40.03 N
ATOM 15 C8 A B1615 105.854 159.086 54.164 1.00 38.65 C
ATOM 16 N7 A B1615 105.406 160.203 54.684 1.00 38.70 N
ATOM 17 C5 A B1615 104.137 160.337 54.140 1.00 38.08 C
ATOM 18 C6 A B1615 103.133 161.302 54.308 1.00 38.97 C
ATOM 19 N6 A B1615 103.242 162.360 55.118 1.00 39.43 N
ATOM 20 N1 A B1615 101.986 161.139 53.610 1.00 40.33 N
ATOM 21 C2 A B1615 101.866 160.070 52.813 1.00 39.32 C
ATOM 22 N3 A B1615 102.732 159.091 52.583 1.00 37.10 N
ATOM 23 C4 A B1615 103.858 159.285 53.286 1.00 38.26 C
ATOM 24 P A B1616 108.428 157.956 49.177 1.00 42.96 P
ATOM 25 OP1 A B1616 109.297 157.223 48.217 1.00 42.51 O
ATOM 26 OP2 A B1616 109.007 159.024 50.037 1.00 43.12 O
ATOM 27 O5' A B1616 107.205 158.567 48.369 1.00 41.59 O
TER
Atoms:
C4: (96.013,158.305,50.198)
N3: (96.892,158.431,51.253)
OP1: (100.647,157.609,44.080)
OP2: (98.183,158.001,44.693)
C2: (98.258,158.317,51.208)
C1': (100.242,157.954,49.843)
C3': (100.802,155.780,49.164)
O5': (99.777,156.941,46.302)
O4': (100.608,157.981,48.472)
C5': (101.078,156.468,46.683)
P: (99.612,157.957,45.088)
C4': (101.327,156.765,48.136)
C2': (100.775,156.647,50.414)
O2': (102.067,156.903,50.928)
N1: (98.781,158.060,49.954)
O4: (94.807,158.445,50.397)
O2: (98.952,158.425,52.207)
C6: (97.957,157.914,48.863)
C5: (96.627,158.024,48.942)
O3': (101.683,154.681,49.334)
N3: (96.892,158.431,51.253)
OP1: (100.647,157.609,44.080)
OP2: (98.183,158.001,44.693)
C2: (98.258,158.317,51.208)
C1': (100.242,157.954,49.843)
C3': (100.802,155.780,49.164)
O5': (99.777,156.941,46.302)
O4': (100.608,157.981,48.472)
C5': (101.078,156.468,46.683)
P: (99.612,157.957,45.088)
C4': (101.327,156.765,48.136)
C2': (100.775,156.647,50.414)
O2': (102.067,156.903,50.928)
N1: (98.781,158.060,49.954)
O4: (94.807,158.445,50.397)
O2: (98.952,158.425,52.207)
C6: (97.957,157.914,48.863)
C5: (96.627,158.024,48.942)
O3': (101.683,154.681,49.334)
OP1: (110.982,156.995,54.690)
OP2: (109.569,158.983,55.502)
C3': (107.074,157.273,51.303)
C1': (105.111,157.215,52.595)
C5': (108.495,156.189,53.118)
O4': (106.101,156.456,53.261)
C8: (105.854,159.086,54.164)
O2': (105.040,156.308,50.390)
C6: (103.133,161.302,54.308)
C5: (104.137,160.337,54.140)
C4: (103.858,159.285,53.286)
P: (109.653,157.592,54.996)
C4': (107.199,156.193,52.355)
C2': (105.567,157.380,51.145)
C2: (101.866,160.070,52.813)
N1: (101.986,161.139,53.610)
N3: (102.732,159.091,52.583)
N6: (103.242,162.360,55.118)
N7: (105.406,160.203,54.684)
N9: (104.961,158.474,53.316)
O5': (108.721,157.469,53.716)
O3': (107.733,156.864,50.118)
OP2: (109.569,158.983,55.502)
C3': (107.074,157.273,51.303)
C1': (105.111,157.215,52.595)
C5': (108.495,156.189,53.118)
O4': (106.101,156.456,53.261)
C8: (105.854,159.086,54.164)
O2': (105.040,156.308,50.390)
C6: (103.133,161.302,54.308)
C5: (104.137,160.337,54.140)
C4: (103.858,159.285,53.286)
P: (109.653,157.592,54.996)
C4': (107.199,156.193,52.355)
C2': (105.567,157.380,51.145)
C2: (101.866,160.070,52.813)
N1: (101.986,161.139,53.610)
N3: (102.732,159.091,52.583)
N6: (103.242,162.360,55.118)
N7: (105.406,160.203,54.684)
N9: (104.961,158.474,53.316)
O5': (108.721,157.469,53.716)
O3': (107.733,156.864,50.118)
Image (generated by PyMOL):