Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1562:A1561
Extra
PDB:
ATOM 1 O3' U A1561 37.708 -44.211 -14.778 1.00 36.22 O
ATOM 2 P G A1562 37.681 -43.114 -13.595 1.00 44.09 P
ATOM 3 OP1 G A1562 39.020 -42.484 -13.550 1.00 32.89 O
ATOM 4 OP2 G A1562 37.163 -43.784 -12.359 1.00 47.79 O
ATOM 5 O5' G A1562 36.613 -42.064 -14.132 1.00 40.38 O
ATOM 6 C5' G A1562 36.990 -41.063 -15.061 1.00 31.21 C
ATOM 7 C4' G A1562 35.824 -40.609 -15.902 1.00 42.77 C
ATOM 8 O4' G A1562 35.469 -41.635 -16.863 1.00 45.17 O
ATOM 9 C3' G A1562 34.520 -40.333 -15.168 1.00 35.83 C
ATOM 10 O3' G A1562 34.505 -39.072 -14.548 1.00 37.33 O
ATOM 11 C2' G A1562 33.512 -40.444 -16.285 1.00 33.18 C
ATOM 12 O2' G A1562 33.605 -39.306 -17.120 1.00 33.21 O
ATOM 13 C1' G A1562 34.069 -41.633 -17.055 1.00 37.65 C
ATOM 14 N9 G A1562 33.536 -42.908 -16.556 1.00 34.17 N
ATOM 15 C8 G A1562 34.211 -43.824 -15.806 1.00 33.98 C
ATOM 16 N7 G A1562 33.475 -44.863 -15.527 1.00 45.13 N
ATOM 17 C5 G A1562 32.233 -44.639 -16.128 1.00 39.76 C
ATOM 18 C6 G A1562 31.015 -45.416 -16.174 1.00 37.83 C
ATOM 19 O6 G A1562 30.708 -46.520 -15.688 1.00 36.69 O
ATOM 20 N1 G A1562 30.036 -44.780 -16.910 1.00 37.46 N
ATOM 21 C2 G A1562 30.196 -43.555 -17.498 1.00 41.00 C
ATOM 22 N2 G A1562 29.126 -43.104 -18.148 1.00 50.50 N
ATOM 23 N3 G A1562 31.297 -42.822 -17.475 1.00 45.31 N
ATOM 24 C4 G A1562 32.279 -43.423 -16.776 1.00 39.70 C
ATOM 25 P G A1563 33.530 -38.808 -13.321 1.00 36.45 P
ATOM 26 OP1 G A1563 33.790 -37.413 -12.849 1.00 34.51 O
ATOM 27 OP2 G A1563 33.710 -39.928 -12.373 1.00 36.54 O
ATOM 28 O5' G A1563 32.106 -38.912 -13.994 1.00 31.56 O
TER
ATOM 1 O3' G B1560 42.902 -46.148 -12.275 1.00 33.21 O
ATOM 2 P U B1561 41.603 -45.411 -11.686 1.00 37.39 P
ATOM 3 OP1 U B1561 41.897 -43.960 -11.661 1.00 57.33 O
ATOM 4 OP2 U B1561 41.256 -46.089 -10.417 1.00 48.11 O
ATOM 5 O5' U B1561 40.495 -45.715 -12.780 1.00 38.87 O
ATOM 6 C5' U B1561 40.678 -45.307 -14.126 1.00 41.11 C
ATOM 7 C4' U B1561 39.562 -45.790 -15.019 1.00 27.77 C
ATOM 8 O4' U B1561 39.626 -47.224 -15.152 1.00 32.08 O
ATOM 9 C3' U B1561 38.148 -45.538 -14.533 1.00 34.12 C
ATOM 10 O3' U B1561 37.708 -44.211 -14.778 1.00 36.22 O
ATOM 11 C2' U B1561 37.367 -46.581 -15.313 1.00 32.57 C
ATOM 12 O2' U B1561 37.256 -46.173 -16.659 1.00 40.97 O
ATOM 13 C1' U B1561 38.327 -47.753 -15.283 1.00 32.17 C
ATOM 14 N1 U B1561 38.080 -48.683 -14.158 1.00 35.89 N
ATOM 15 C2 U B1561 37.327 -49.808 -14.399 1.00 37.30 C
ATOM 16 O2 U B1561 36.818 -50.033 -15.475 1.00 39.14 O
ATOM 17 N3 U B1561 37.177 -50.663 -13.334 1.00 42.58 N
ATOM 18 C4 U B1561 37.711 -50.543 -12.064 1.00 40.73 C
ATOM 19 O4 U B1561 37.506 -51.402 -11.181 1.00 35.19 O
ATOM 20 C5 U B1561 38.495 -49.361 -11.923 1.00 39.72 C
ATOM 21 C6 U B1561 38.664 -48.511 -12.933 1.00 34.34 C
ATOM 22 P G B1562 37.681 -43.114 -13.595 1.00 44.09 P
ATOM 23 OP1 G B1562 39.020 -42.484 -13.550 1.00 32.89 O
ATOM 24 OP2 G B1562 37.163 -43.784 -12.359 1.00 47.79 O
ATOM 25 O5' G B1562 36.613 -42.064 -14.132 1.00 40.38 O
TER
ATOM 2 P G A1562 37.681 -43.114 -13.595 1.00 44.09 P
ATOM 3 OP1 G A1562 39.020 -42.484 -13.550 1.00 32.89 O
ATOM 4 OP2 G A1562 37.163 -43.784 -12.359 1.00 47.79 O
ATOM 5 O5' G A1562 36.613 -42.064 -14.132 1.00 40.38 O
ATOM 6 C5' G A1562 36.990 -41.063 -15.061 1.00 31.21 C
ATOM 7 C4' G A1562 35.824 -40.609 -15.902 1.00 42.77 C
ATOM 8 O4' G A1562 35.469 -41.635 -16.863 1.00 45.17 O
ATOM 9 C3' G A1562 34.520 -40.333 -15.168 1.00 35.83 C
ATOM 10 O3' G A1562 34.505 -39.072 -14.548 1.00 37.33 O
ATOM 11 C2' G A1562 33.512 -40.444 -16.285 1.00 33.18 C
ATOM 12 O2' G A1562 33.605 -39.306 -17.120 1.00 33.21 O
ATOM 13 C1' G A1562 34.069 -41.633 -17.055 1.00 37.65 C
ATOM 14 N9 G A1562 33.536 -42.908 -16.556 1.00 34.17 N
ATOM 15 C8 G A1562 34.211 -43.824 -15.806 1.00 33.98 C
ATOM 16 N7 G A1562 33.475 -44.863 -15.527 1.00 45.13 N
ATOM 17 C5 G A1562 32.233 -44.639 -16.128 1.00 39.76 C
ATOM 18 C6 G A1562 31.015 -45.416 -16.174 1.00 37.83 C
ATOM 19 O6 G A1562 30.708 -46.520 -15.688 1.00 36.69 O
ATOM 20 N1 G A1562 30.036 -44.780 -16.910 1.00 37.46 N
ATOM 21 C2 G A1562 30.196 -43.555 -17.498 1.00 41.00 C
ATOM 22 N2 G A1562 29.126 -43.104 -18.148 1.00 50.50 N
ATOM 23 N3 G A1562 31.297 -42.822 -17.475 1.00 45.31 N
ATOM 24 C4 G A1562 32.279 -43.423 -16.776 1.00 39.70 C
ATOM 25 P G A1563 33.530 -38.808 -13.321 1.00 36.45 P
ATOM 26 OP1 G A1563 33.790 -37.413 -12.849 1.00 34.51 O
ATOM 27 OP2 G A1563 33.710 -39.928 -12.373 1.00 36.54 O
ATOM 28 O5' G A1563 32.106 -38.912 -13.994 1.00 31.56 O
TER
ATOM 1 O3' G B1560 42.902 -46.148 -12.275 1.00 33.21 O
ATOM 2 P U B1561 41.603 -45.411 -11.686 1.00 37.39 P
ATOM 3 OP1 U B1561 41.897 -43.960 -11.661 1.00 57.33 O
ATOM 4 OP2 U B1561 41.256 -46.089 -10.417 1.00 48.11 O
ATOM 5 O5' U B1561 40.495 -45.715 -12.780 1.00 38.87 O
ATOM 6 C5' U B1561 40.678 -45.307 -14.126 1.00 41.11 C
ATOM 7 C4' U B1561 39.562 -45.790 -15.019 1.00 27.77 C
ATOM 8 O4' U B1561 39.626 -47.224 -15.152 1.00 32.08 O
ATOM 9 C3' U B1561 38.148 -45.538 -14.533 1.00 34.12 C
ATOM 10 O3' U B1561 37.708 -44.211 -14.778 1.00 36.22 O
ATOM 11 C2' U B1561 37.367 -46.581 -15.313 1.00 32.57 C
ATOM 12 O2' U B1561 37.256 -46.173 -16.659 1.00 40.97 O
ATOM 13 C1' U B1561 38.327 -47.753 -15.283 1.00 32.17 C
ATOM 14 N1 U B1561 38.080 -48.683 -14.158 1.00 35.89 N
ATOM 15 C2 U B1561 37.327 -49.808 -14.399 1.00 37.30 C
ATOM 16 O2 U B1561 36.818 -50.033 -15.475 1.00 39.14 O
ATOM 17 N3 U B1561 37.177 -50.663 -13.334 1.00 42.58 N
ATOM 18 C4 U B1561 37.711 -50.543 -12.064 1.00 40.73 C
ATOM 19 O4 U B1561 37.506 -51.402 -11.181 1.00 35.19 O
ATOM 20 C5 U B1561 38.495 -49.361 -11.923 1.00 39.72 C
ATOM 21 C6 U B1561 38.664 -48.511 -12.933 1.00 34.34 C
ATOM 22 P G B1562 37.681 -43.114 -13.595 1.00 44.09 P
ATOM 23 OP1 G B1562 39.020 -42.484 -13.550 1.00 32.89 O
ATOM 24 OP2 G B1562 37.163 -43.784 -12.359 1.00 47.79 O
ATOM 25 O5' G B1562 36.613 -42.064 -14.132 1.00 40.38 O
TER
Atoms:
OP1: (39.020,-42.484,-13.550)
OP2: (37.163,-43.784,-12.359)
C3': (34.520,-40.333,-15.168)
C1': (34.069,-41.633,-17.055)
C5': (36.990,-41.063,-15.061)
O6: (30.708,-46.520,-15.688)
O4': (35.469,-41.635,-16.863)
C8: (34.211,-43.824,-15.806)
C2: (30.196,-43.555,-17.498)
C6: (31.015,-45.416,-16.174)
C5: (32.233,-44.639,-16.128)
C4: (32.279,-43.423,-16.776)
P: (37.681,-43.114,-13.595)
C4': (35.824,-40.609,-15.902)
C2': (33.512,-40.444,-16.285)
O2': (33.605,-39.306,-17.120)
N1: (30.036,-44.780,-16.910)
N2: (29.126,-43.104,-18.148)
N3: (31.297,-42.822,-17.475)
N7: (33.475,-44.863,-15.527)
N9: (33.536,-42.908,-16.556)
O5': (36.613,-42.064,-14.132)
O3': (34.505,-39.072,-14.548)
OP2: (37.163,-43.784,-12.359)
C3': (34.520,-40.333,-15.168)
C1': (34.069,-41.633,-17.055)
C5': (36.990,-41.063,-15.061)
O6: (30.708,-46.520,-15.688)
O4': (35.469,-41.635,-16.863)
C8: (34.211,-43.824,-15.806)
C2: (30.196,-43.555,-17.498)
C6: (31.015,-45.416,-16.174)
C5: (32.233,-44.639,-16.128)
C4: (32.279,-43.423,-16.776)
P: (37.681,-43.114,-13.595)
C4': (35.824,-40.609,-15.902)
C2': (33.512,-40.444,-16.285)
O2': (33.605,-39.306,-17.120)
N1: (30.036,-44.780,-16.910)
N2: (29.126,-43.104,-18.148)
N3: (31.297,-42.822,-17.475)
N7: (33.475,-44.863,-15.527)
N9: (33.536,-42.908,-16.556)
O5': (36.613,-42.064,-14.132)
O3': (34.505,-39.072,-14.548)
C4: (37.711,-50.543,-12.064)
N3: (37.177,-50.663,-13.334)
OP1: (41.897,-43.960,-11.661)
OP2: (41.256,-46.089,-10.417)
C2: (37.327,-49.808,-14.399)
C1': (38.327,-47.753,-15.283)
C3': (38.148,-45.538,-14.533)
O5': (40.495,-45.715,-12.780)
O4': (39.626,-47.224,-15.152)
C5': (40.678,-45.307,-14.126)
P: (41.603,-45.411,-11.686)
C4': (39.562,-45.790,-15.019)
C2': (37.367,-46.581,-15.313)
O2': (37.256,-46.173,-16.659)
N1: (38.080,-48.683,-14.158)
O4: (37.506,-51.402,-11.181)
O2: (36.818,-50.033,-15.475)
C6: (38.664,-48.511,-12.933)
C5: (38.495,-49.361,-11.923)
O3': (37.708,-44.211,-14.778)
N3: (37.177,-50.663,-13.334)
OP1: (41.897,-43.960,-11.661)
OP2: (41.256,-46.089,-10.417)
C2: (37.327,-49.808,-14.399)
C1': (38.327,-47.753,-15.283)
C3': (38.148,-45.538,-14.533)
O5': (40.495,-45.715,-12.780)
O4': (39.626,-47.224,-15.152)
C5': (40.678,-45.307,-14.126)
P: (41.603,-45.411,-11.686)
C4': (39.562,-45.790,-15.019)
C2': (37.367,-46.581,-15.313)
O2': (37.256,-46.173,-16.659)
N1: (38.080,-48.683,-14.158)
O4: (37.506,-51.402,-11.181)
O2: (36.818,-50.033,-15.475)
C6: (38.664,-48.511,-12.933)
C5: (38.495,-49.361,-11.923)
O3': (37.708,-44.211,-14.778)
Image (generated by PyMOL):