Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX5:A29:A60
Extra
PDB:
ATOM 1 O3' C A 28 10.049 -18.966 35.130 1.00 51.70 O
ATOM 2 P C A 29 10.327 -17.614 35.944 1.00 58.01 P
ATOM 3 OP1 C A 29 11.742 -17.675 36.359 1.00 60.44 O
ATOM 4 OP2 C A 29 9.236 -17.462 36.932 1.00 59.11 O
ATOM 5 O5' C A 29 10.199 -16.442 34.860 1.00 50.90 O
ATOM 6 C5' C A 29 10.721 -15.155 35.112 1.00 47.25 C
ATOM 7 C4' C A 29 10.878 -14.389 33.810 1.00 47.95 C
ATOM 8 O4' C A 29 9.945 -14.880 32.815 1.00 52.40 O
ATOM 9 C3' C A 29 10.530 -12.921 33.923 1.00 46.99 C
ATOM 10 O3' C A 29 11.632 -12.213 34.438 1.00 41.84 O
ATOM 11 C2' C A 29 10.239 -12.559 32.472 1.00 49.97 C
ATOM 12 O2' C A 29 11.429 -12.398 31.728 1.00 53.67 O
ATOM 13 C1' C A 29 9.503 -13.806 32.006 1.00 48.72 C
ATOM 14 N1 C A 29 8.044 -13.701 32.158 1.00 49.23 N
ATOM 15 C2 C A 29 7.341 -12.762 31.397 1.00 50.27 C
ATOM 16 O2 C A 29 7.968 -12.043 30.620 1.00 54.47 O
ATOM 17 N3 C A 29 6.000 -12.658 31.529 1.00 46.63 N
ATOM 18 C4 C A 29 5.369 -13.456 32.385 1.00 51.55 C
ATOM 19 N4 C A 29 4.041 -13.326 32.485 1.00 54.61 N
ATOM 20 C5 C A 29 6.063 -14.427 33.173 1.00 50.84 C
ATOM 21 C6 C A 29 7.391 -14.515 33.031 1.00 49.69 C
ATOM 22 P C A 30 11.331 -11.033 35.471 1.00 52.10 P
ATOM 23 OP1 C A 30 12.620 -10.601 36.058 1.00 50.27 O
ATOM 24 OP2 C A 30 10.202 -11.461 36.321 1.00 54.27 O
ATOM 25 O5' C A 30 10.778 -9.878 34.526 1.00 46.08 O
TER
ATOM 1 O3' C B 59 14.248 -3.113 22.330 1.00 46.00 O
ATOM 2 P A B 60 13.288 -2.985 23.598 1.00 52.06 P
ATOM 3 OP1 A B 60 11.950 -3.497 23.238 1.00 50.88 O
ATOM 4 OP2 A B 60 13.453 -1.612 24.132 1.00 59.67 O
ATOM 5 O5' A B 60 13.953 -4.018 24.627 1.00 47.61 O
ATOM 6 C5' A B 60 14.620 -5.182 24.146 1.00 44.55 C
ATOM 7 C4' A B 60 15.194 -6.002 25.288 1.00 41.72 C
ATOM 8 O4' A B 60 14.323 -5.938 26.443 1.00 42.63 O
ATOM 9 C3' A B 60 15.298 -7.490 25.002 1.00 38.94 C
ATOM 10 O3' A B 60 16.497 -7.752 24.306 1.00 40.49 O
ATOM 11 C2' A B 60 15.386 -8.057 26.406 1.00 37.99 C
ATOM 12 O2' A B 60 16.694 -7.891 26.904 1.00 40.44 O
ATOM 13 C1' A B 60 14.461 -7.135 27.187 1.00 40.23 C
ATOM 14 N9 A B 60 13.161 -7.729 27.431 1.00 40.71 N
ATOM 15 C8 A B 60 11.952 -7.387 26.886 1.00 39.63 C
ATOM 16 N7 A B 60 10.956 -8.133 27.311 1.00 38.27 N
ATOM 17 C5 A B 60 11.558 -9.015 28.200 1.00 38.09 C
ATOM 18 C6 A B 60 11.057 -10.064 29.001 1.00 37.19 C
ATOM 19 N6 A B 60 9.761 -10.414 29.036 1.00 29.96 N
ATOM 20 N1 A B 60 11.941 -10.752 29.764 1.00 40.45 N
ATOM 21 C2 A B 60 13.230 -10.403 29.736 1.00 39.80 C
ATOM 22 N3 A B 60 13.810 -9.433 29.029 1.00 43.34 N
ATOM 23 C4 A B 60 12.914 -8.779 28.276 1.00 41.16 C
ATOM 24 P A B 61 16.502 -8.939 23.240 1.00 45.90 P
ATOM 25 OP1 A B 61 17.773 -8.828 22.484 1.00 49.76 O
ATOM 26 OP2 A B 61 15.170 -8.919 22.584 1.00 40.98 O
ATOM 27 O5' A B 61 16.595 -10.286 24.108 1.00 36.85 O
TER
ATOM 2 P C A 29 10.327 -17.614 35.944 1.00 58.01 P
ATOM 3 OP1 C A 29 11.742 -17.675 36.359 1.00 60.44 O
ATOM 4 OP2 C A 29 9.236 -17.462 36.932 1.00 59.11 O
ATOM 5 O5' C A 29 10.199 -16.442 34.860 1.00 50.90 O
ATOM 6 C5' C A 29 10.721 -15.155 35.112 1.00 47.25 C
ATOM 7 C4' C A 29 10.878 -14.389 33.810 1.00 47.95 C
ATOM 8 O4' C A 29 9.945 -14.880 32.815 1.00 52.40 O
ATOM 9 C3' C A 29 10.530 -12.921 33.923 1.00 46.99 C
ATOM 10 O3' C A 29 11.632 -12.213 34.438 1.00 41.84 O
ATOM 11 C2' C A 29 10.239 -12.559 32.472 1.00 49.97 C
ATOM 12 O2' C A 29 11.429 -12.398 31.728 1.00 53.67 O
ATOM 13 C1' C A 29 9.503 -13.806 32.006 1.00 48.72 C
ATOM 14 N1 C A 29 8.044 -13.701 32.158 1.00 49.23 N
ATOM 15 C2 C A 29 7.341 -12.762 31.397 1.00 50.27 C
ATOM 16 O2 C A 29 7.968 -12.043 30.620 1.00 54.47 O
ATOM 17 N3 C A 29 6.000 -12.658 31.529 1.00 46.63 N
ATOM 18 C4 C A 29 5.369 -13.456 32.385 1.00 51.55 C
ATOM 19 N4 C A 29 4.041 -13.326 32.485 1.00 54.61 N
ATOM 20 C5 C A 29 6.063 -14.427 33.173 1.00 50.84 C
ATOM 21 C6 C A 29 7.391 -14.515 33.031 1.00 49.69 C
ATOM 22 P C A 30 11.331 -11.033 35.471 1.00 52.10 P
ATOM 23 OP1 C A 30 12.620 -10.601 36.058 1.00 50.27 O
ATOM 24 OP2 C A 30 10.202 -11.461 36.321 1.00 54.27 O
ATOM 25 O5' C A 30 10.778 -9.878 34.526 1.00 46.08 O
TER
ATOM 1 O3' C B 59 14.248 -3.113 22.330 1.00 46.00 O
ATOM 2 P A B 60 13.288 -2.985 23.598 1.00 52.06 P
ATOM 3 OP1 A B 60 11.950 -3.497 23.238 1.00 50.88 O
ATOM 4 OP2 A B 60 13.453 -1.612 24.132 1.00 59.67 O
ATOM 5 O5' A B 60 13.953 -4.018 24.627 1.00 47.61 O
ATOM 6 C5' A B 60 14.620 -5.182 24.146 1.00 44.55 C
ATOM 7 C4' A B 60 15.194 -6.002 25.288 1.00 41.72 C
ATOM 8 O4' A B 60 14.323 -5.938 26.443 1.00 42.63 O
ATOM 9 C3' A B 60 15.298 -7.490 25.002 1.00 38.94 C
ATOM 10 O3' A B 60 16.497 -7.752 24.306 1.00 40.49 O
ATOM 11 C2' A B 60 15.386 -8.057 26.406 1.00 37.99 C
ATOM 12 O2' A B 60 16.694 -7.891 26.904 1.00 40.44 O
ATOM 13 C1' A B 60 14.461 -7.135 27.187 1.00 40.23 C
ATOM 14 N9 A B 60 13.161 -7.729 27.431 1.00 40.71 N
ATOM 15 C8 A B 60 11.952 -7.387 26.886 1.00 39.63 C
ATOM 16 N7 A B 60 10.956 -8.133 27.311 1.00 38.27 N
ATOM 17 C5 A B 60 11.558 -9.015 28.200 1.00 38.09 C
ATOM 18 C6 A B 60 11.057 -10.064 29.001 1.00 37.19 C
ATOM 19 N6 A B 60 9.761 -10.414 29.036 1.00 29.96 N
ATOM 20 N1 A B 60 11.941 -10.752 29.764 1.00 40.45 N
ATOM 21 C2 A B 60 13.230 -10.403 29.736 1.00 39.80 C
ATOM 22 N3 A B 60 13.810 -9.433 29.029 1.00 43.34 N
ATOM 23 C4 A B 60 12.914 -8.779 28.276 1.00 41.16 C
ATOM 24 P A B 61 16.502 -8.939 23.240 1.00 45.90 P
ATOM 25 OP1 A B 61 17.773 -8.828 22.484 1.00 49.76 O
ATOM 26 OP2 A B 61 15.170 -8.919 22.584 1.00 40.98 O
ATOM 27 O5' A B 61 16.595 -10.286 24.108 1.00 36.85 O
TER
Atoms:
C2: (7.341,-12.762,31.397)
OP1: (11.742,-17.675,36.359)
OP2: (9.236,-17.462,36.932)
C4: (5.369,-13.456,32.385)
O5': (10.199,-16.442,34.860)
C3': (10.530,-12.921,33.923)
C1': (9.503,-13.806,32.006)
O4': (9.945,-14.880,32.815)
C5': (10.721,-15.155,35.112)
P: (10.327,-17.614,35.944)
O2: (7.968,-12.043,30.620)
C4': (10.878,-14.389,33.810)
C2': (10.239,-12.559,32.472)
O2': (11.429,-12.398,31.728)
N1: (8.044,-13.701,32.158)
N3: (6.000,-12.658,31.529)
N4: (4.041,-13.326,32.485)
C6: (7.391,-14.515,33.031)
C5: (6.063,-14.427,33.173)
O3': (11.632,-12.213,34.438)
OP1: (11.742,-17.675,36.359)
OP2: (9.236,-17.462,36.932)
C4: (5.369,-13.456,32.385)
O5': (10.199,-16.442,34.860)
C3': (10.530,-12.921,33.923)
C1': (9.503,-13.806,32.006)
O4': (9.945,-14.880,32.815)
C5': (10.721,-15.155,35.112)
P: (10.327,-17.614,35.944)
O2: (7.968,-12.043,30.620)
C4': (10.878,-14.389,33.810)
C2': (10.239,-12.559,32.472)
O2': (11.429,-12.398,31.728)
N1: (8.044,-13.701,32.158)
N3: (6.000,-12.658,31.529)
N4: (4.041,-13.326,32.485)
C6: (7.391,-14.515,33.031)
C5: (6.063,-14.427,33.173)
O3': (11.632,-12.213,34.438)
OP1: (11.950,-3.497,23.238)
OP2: (13.453,-1.612,24.132)
C3': (15.298,-7.490,25.002)
C1': (14.461,-7.135,27.187)
C5': (14.620,-5.182,24.146)
O4': (14.323,-5.938,26.443)
C8: (11.952,-7.387,26.886)
O2': (16.694,-7.891,26.904)
C6: (11.057,-10.064,29.001)
C5: (11.558,-9.015,28.200)
C4: (12.914,-8.779,28.276)
P: (13.288,-2.985,23.598)
C4': (15.194,-6.002,25.288)
C2': (15.386,-8.057,26.406)
C2: (13.230,-10.403,29.736)
N1: (11.941,-10.752,29.764)
N3: (13.810,-9.433,29.029)
N6: (9.761,-10.414,29.036)
N7: (10.956,-8.133,27.311)
N9: (13.161,-7.729,27.431)
O5': (13.953,-4.018,24.627)
O3': (16.497,-7.752,24.306)
OP2: (13.453,-1.612,24.132)
C3': (15.298,-7.490,25.002)
C1': (14.461,-7.135,27.187)
C5': (14.620,-5.182,24.146)
O4': (14.323,-5.938,26.443)
C8: (11.952,-7.387,26.886)
O2': (16.694,-7.891,26.904)
C6: (11.057,-10.064,29.001)
C5: (11.558,-9.015,28.200)
C4: (12.914,-8.779,28.276)
P: (13.288,-2.985,23.598)
C4': (15.194,-6.002,25.288)
C2': (15.386,-8.057,26.406)
C2: (13.230,-10.403,29.736)
N1: (11.941,-10.752,29.764)
N3: (13.810,-9.433,29.029)
N6: (9.761,-10.414,29.036)
N7: (10.956,-8.133,27.311)
N9: (13.161,-7.729,27.431)
O5': (13.953,-4.018,24.627)
O3': (16.497,-7.752,24.306)
Image (generated by PyMOL):