Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:6499:6498
Extra
PDB:
ATOM 1 O3' U A 498 271.056 29.943 288.562 1.00195.84 O
ATOM 2 P G A 499 269.835 30.656 289.328 1.00169.15 P
ATOM 3 OP1 G A 499 268.943 31.211 288.288 1.00169.00 O
ATOM 4 OP2 G A 499 270.416 31.583 290.328 1.00168.98 O
ATOM 5 O5' G A 499 269.116 29.437 290.067 1.00169.20 O
ATOM 6 C5' G A 499 268.096 28.689 289.420 1.00169.23 C
ATOM 7 C4' G A 499 268.181 27.222 289.755 1.00169.49 C
ATOM 8 O4' G A 499 269.576 26.831 289.885 1.00169.78 O
ATOM 9 C3' G A 499 267.555 26.802 291.079 1.00169.34 C
ATOM 10 O3' G A 499 266.153 26.606 291.003 1.00169.16 O
ATOM 11 C2' G A 499 268.328 25.540 291.417 1.00169.68 C
ATOM 12 O2' G A 499 267.898 24.457 290.607 1.00169.89 O
ATOM 13 C1' G A 499 269.729 25.946 290.976 1.00169.87 C
ATOM 14 N9 G A 499 270.439 26.667 292.049 1.00169.75 N
ATOM 15 C8 G A 499 271.026 27.905 291.933 1.00169.63 C
ATOM 16 N7 G A 499 271.566 28.329 293.044 1.00169.53 N
ATOM 17 C5 G A 499 271.312 27.315 293.955 1.00169.60 C
ATOM 18 C6 G A 499 271.662 27.219 295.326 1.00169.55 C
ATOM 19 O6 G A 499 272.280 28.038 296.023 1.00169.43 O
ATOM 20 N1 G A 499 271.207 26.021 295.869 1.00169.65 N
ATOM 21 C2 G A 499 270.517 25.030 295.214 1.00169.79 C
ATOM 22 N2 G A 499 270.179 23.947 295.947 1.00169.87 N
ATOM 23 N3 G A 499 270.187 25.115 293.932 1.00169.83 N
ATOM 24 C4 G A 499 270.613 26.274 293.363 1.00169.74 C
ATOM 25 P U A 500 265.221 26.978 292.259 1.00178.13 P
ATOM 26 OP1 U A 500 264.212 27.956 291.782 1.00177.82 O
ATOM 27 OP2 U A 500 266.123 27.373 293.357 1.00178.10 O
ATOM 28 O5' U A 500 264.508 25.595 292.610 1.00178.24 O
TER
ATOM 1 O3' U B 497 275.870 34.706 289.975 1.00235.14 O
ATOM 2 P U B 498 274.305 34.351 290.167 1.00195.40 P
ATOM 3 OP1 U B 498 273.521 35.440 289.523 1.00195.13 O
ATOM 4 OP2 U B 498 274.092 34.084 291.614 1.00195.28 O
ATOM 5 O5' U B 498 274.136 32.998 289.336 1.00195.71 O
ATOM 6 C5' U B 498 273.311 31.951 289.826 1.00195.72 C
ATOM 7 C4' U B 498 273.350 30.722 288.946 1.00196.04 C
ATOM 8 O4' U B 498 274.603 30.014 289.152 1.00196.36 O
ATOM 9 C3' U B 498 272.271 29.683 289.240 1.00196.03 C
ATOM 10 O3' U B 498 271.056 29.943 288.562 1.00195.84 O
ATOM 11 C2' U B 498 272.927 28.369 288.842 1.00196.42 C
ATOM 12 O2' U B 498 272.883 28.188 287.436 1.00196.58 O
ATOM 13 C1' U B 498 274.373 28.625 289.254 1.00196.57 C
ATOM 14 N1 U B 498 274.625 28.228 290.655 1.00196.56 N
ATOM 15 C2 U B 498 274.514 26.907 291.059 1.00196.75 C
ATOM 16 O2 U B 498 274.205 25.983 290.322 1.00196.94 O
ATOM 17 N3 U B 498 274.782 26.716 292.396 1.00196.71 N
ATOM 18 C4 U B 498 275.136 27.674 293.332 1.00196.50 C
ATOM 19 O4 U B 498 275.346 27.347 294.498 1.00196.49 O
ATOM 20 C5 U B 498 275.232 29.004 292.834 1.00196.31 C
ATOM 21 C6 U B 498 274.979 29.217 291.545 1.00196.35 C
ATOM 22 P G B 499 269.835 30.656 289.328 1.00169.15 P
ATOM 23 OP1 G B 499 268.943 31.211 288.288 1.00169.00 O
ATOM 24 OP2 G B 499 270.416 31.583 290.328 1.00168.98 O
ATOM 25 O5' G B 499 269.116 29.437 290.067 1.00169.20 O
TER
ATOM 2 P G A 499 269.835 30.656 289.328 1.00169.15 P
ATOM 3 OP1 G A 499 268.943 31.211 288.288 1.00169.00 O
ATOM 4 OP2 G A 499 270.416 31.583 290.328 1.00168.98 O
ATOM 5 O5' G A 499 269.116 29.437 290.067 1.00169.20 O
ATOM 6 C5' G A 499 268.096 28.689 289.420 1.00169.23 C
ATOM 7 C4' G A 499 268.181 27.222 289.755 1.00169.49 C
ATOM 8 O4' G A 499 269.576 26.831 289.885 1.00169.78 O
ATOM 9 C3' G A 499 267.555 26.802 291.079 1.00169.34 C
ATOM 10 O3' G A 499 266.153 26.606 291.003 1.00169.16 O
ATOM 11 C2' G A 499 268.328 25.540 291.417 1.00169.68 C
ATOM 12 O2' G A 499 267.898 24.457 290.607 1.00169.89 O
ATOM 13 C1' G A 499 269.729 25.946 290.976 1.00169.87 C
ATOM 14 N9 G A 499 270.439 26.667 292.049 1.00169.75 N
ATOM 15 C8 G A 499 271.026 27.905 291.933 1.00169.63 C
ATOM 16 N7 G A 499 271.566 28.329 293.044 1.00169.53 N
ATOM 17 C5 G A 499 271.312 27.315 293.955 1.00169.60 C
ATOM 18 C6 G A 499 271.662 27.219 295.326 1.00169.55 C
ATOM 19 O6 G A 499 272.280 28.038 296.023 1.00169.43 O
ATOM 20 N1 G A 499 271.207 26.021 295.869 1.00169.65 N
ATOM 21 C2 G A 499 270.517 25.030 295.214 1.00169.79 C
ATOM 22 N2 G A 499 270.179 23.947 295.947 1.00169.87 N
ATOM 23 N3 G A 499 270.187 25.115 293.932 1.00169.83 N
ATOM 24 C4 G A 499 270.613 26.274 293.363 1.00169.74 C
ATOM 25 P U A 500 265.221 26.978 292.259 1.00178.13 P
ATOM 26 OP1 U A 500 264.212 27.956 291.782 1.00177.82 O
ATOM 27 OP2 U A 500 266.123 27.373 293.357 1.00178.10 O
ATOM 28 O5' U A 500 264.508 25.595 292.610 1.00178.24 O
TER
ATOM 1 O3' U B 497 275.870 34.706 289.975 1.00235.14 O
ATOM 2 P U B 498 274.305 34.351 290.167 1.00195.40 P
ATOM 3 OP1 U B 498 273.521 35.440 289.523 1.00195.13 O
ATOM 4 OP2 U B 498 274.092 34.084 291.614 1.00195.28 O
ATOM 5 O5' U B 498 274.136 32.998 289.336 1.00195.71 O
ATOM 6 C5' U B 498 273.311 31.951 289.826 1.00195.72 C
ATOM 7 C4' U B 498 273.350 30.722 288.946 1.00196.04 C
ATOM 8 O4' U B 498 274.603 30.014 289.152 1.00196.36 O
ATOM 9 C3' U B 498 272.271 29.683 289.240 1.00196.03 C
ATOM 10 O3' U B 498 271.056 29.943 288.562 1.00195.84 O
ATOM 11 C2' U B 498 272.927 28.369 288.842 1.00196.42 C
ATOM 12 O2' U B 498 272.883 28.188 287.436 1.00196.58 O
ATOM 13 C1' U B 498 274.373 28.625 289.254 1.00196.57 C
ATOM 14 N1 U B 498 274.625 28.228 290.655 1.00196.56 N
ATOM 15 C2 U B 498 274.514 26.907 291.059 1.00196.75 C
ATOM 16 O2 U B 498 274.205 25.983 290.322 1.00196.94 O
ATOM 17 N3 U B 498 274.782 26.716 292.396 1.00196.71 N
ATOM 18 C4 U B 498 275.136 27.674 293.332 1.00196.50 C
ATOM 19 O4 U B 498 275.346 27.347 294.498 1.00196.49 O
ATOM 20 C5 U B 498 275.232 29.004 292.834 1.00196.31 C
ATOM 21 C6 U B 498 274.979 29.217 291.545 1.00196.35 C
ATOM 22 P G B 499 269.835 30.656 289.328 1.00169.15 P
ATOM 23 OP1 G B 499 268.943 31.211 288.288 1.00169.00 O
ATOM 24 OP2 G B 499 270.416 31.583 290.328 1.00168.98 O
ATOM 25 O5' G B 499 269.116 29.437 290.067 1.00169.20 O
TER
Atoms:
OP1: (268.943,31.211,288.288)
OP2: (270.416,31.583,290.328)
C3': (267.555,26.802,291.079)
C1': (269.729,25.946,290.976)
C5': (268.096,28.689,289.420)
O6: (272.280,28.038,296.023)
O4': (269.576,26.831,289.885)
C8: (271.026,27.905,291.933)
C2: (270.517,25.030,295.214)
C6: (271.662,27.219,295.326)
C5: (271.312,27.315,293.955)
C4: (270.613,26.274,293.363)
P: (269.835,30.656,289.328)
C4': (268.181,27.222,289.755)
C2': (268.328,25.540,291.417)
O2': (267.898,24.457,290.607)
N1: (271.207,26.021,295.869)
N2: (270.179,23.947,295.947)
N3: (270.187,25.115,293.932)
N7: (271.566,28.329,293.044)
N9: (270.439,26.667,292.049)
O5': (269.116,29.437,290.067)
O3': (266.153,26.606,291.003)
OP2: (270.416,31.583,290.328)
C3': (267.555,26.802,291.079)
C1': (269.729,25.946,290.976)
C5': (268.096,28.689,289.420)
O6: (272.280,28.038,296.023)
O4': (269.576,26.831,289.885)
C8: (271.026,27.905,291.933)
C2: (270.517,25.030,295.214)
C6: (271.662,27.219,295.326)
C5: (271.312,27.315,293.955)
C4: (270.613,26.274,293.363)
P: (269.835,30.656,289.328)
C4': (268.181,27.222,289.755)
C2': (268.328,25.540,291.417)
O2': (267.898,24.457,290.607)
N1: (271.207,26.021,295.869)
N2: (270.179,23.947,295.947)
N3: (270.187,25.115,293.932)
N7: (271.566,28.329,293.044)
N9: (270.439,26.667,292.049)
O5': (269.116,29.437,290.067)
O3': (266.153,26.606,291.003)
C4: (275.136,27.674,293.332)
N3: (274.782,26.716,292.396)
OP1: (273.521,35.440,289.523)
OP2: (274.092,34.084,291.614)
C2: (274.514,26.907,291.059)
C1': (274.373,28.625,289.254)
C3': (272.271,29.683,289.240)
O5': (274.136,32.998,289.336)
O4': (274.603,30.014,289.152)
C5': (273.311,31.951,289.826)
P: (274.305,34.351,290.167)
C4': (273.350,30.722,288.946)
C2': (272.927,28.369,288.842)
O2': (272.883,28.188,287.436)
N1: (274.625,28.228,290.655)
O4: (275.346,27.347,294.498)
O2: (274.205,25.983,290.322)
C6: (274.979,29.217,291.545)
C5: (275.232,29.004,292.834)
O3': (271.056,29.943,288.562)
N3: (274.782,26.716,292.396)
OP1: (273.521,35.440,289.523)
OP2: (274.092,34.084,291.614)
C2: (274.514,26.907,291.059)
C1': (274.373,28.625,289.254)
C3': (272.271,29.683,289.240)
O5': (274.136,32.998,289.336)
O4': (274.603,30.014,289.152)
C5': (273.311,31.951,289.826)
P: (274.305,34.351,290.167)
C4': (273.350,30.722,288.946)
C2': (272.927,28.369,288.842)
O2': (272.883,28.188,287.436)
N1: (274.625,28.228,290.655)
O4: (275.346,27.347,294.498)
O2: (274.205,25.983,290.322)
C6: (274.979,29.217,291.545)
C5: (275.232,29.004,292.834)
O3': (271.056,29.943,288.562)
Image (generated by PyMOL):