Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1125:A1124
Extra
PDB:
ATOM 1 O3' U A1124 -109.788 113.136 27.129 1.00 76.27 O
ATOM 2 P G A1125 -109.162 114.614 26.992 1.00 70.56 P
ATOM 3 OP1 G A1125 -109.102 115.192 28.362 1.00 70.56 O
ATOM 4 OP2 G A1125 -109.952 115.329 25.953 1.00 70.56 O
ATOM 5 O5' G A1125 -107.677 114.333 26.450 1.00 70.56 O
ATOM 6 C5' G A1125 -106.597 114.090 27.351 1.00 70.56 C
ATOM 7 C4' G A1125 -105.268 114.554 26.792 1.00 70.56 C
ATOM 8 O4' G A1125 -104.773 113.605 25.818 1.00 70.56 O
ATOM 9 C3' G A1125 -105.278 115.879 26.053 1.00 70.56 C
ATOM 10 O3' G A1125 -105.238 116.987 26.930 1.00 70.56 O
ATOM 11 C2' G A1125 -104.061 115.777 25.140 1.00 70.56 C
ATOM 12 O2' G A1125 -102.873 116.123 25.833 1.00 70.56 O
ATOM 13 C1' G A1125 -104.022 114.279 24.827 1.00 70.56 C
ATOM 14 N9 G A1125 -104.593 113.950 23.505 1.00 69.97 N
ATOM 15 C8 G A1125 -105.825 113.358 23.379 1.00 69.97 C
ATOM 16 N7 G A1125 -106.148 113.106 22.147 1.00 69.97 N
ATOM 17 C5 G A1125 -105.059 113.538 21.401 1.00 69.97 C
ATOM 18 C6 G A1125 -104.882 113.503 19.995 1.00 69.97 C
ATOM 19 O6 G A1125 -105.667 113.076 19.149 1.00 69.97 O
ATOM 20 N1 G A1125 -103.663 114.023 19.598 1.00 69.97 N
ATOM 21 C2 G A1125 -102.729 114.524 20.458 1.00 69.97 C
ATOM 22 N2 G A1125 -101.638 114.980 19.831 1.00 69.97 N
ATOM 23 N3 G A1125 -102.867 114.574 21.791 1.00 69.97 N
ATOM 24 C4 G A1125 -104.063 114.060 22.211 1.00 69.97 C
ATOM 25 P C A1126 -106.150 118.271 26.638 1.00 67.89 P
ATOM 26 OP1 C A1126 -106.229 119.060 27.898 1.00 67.89 O
ATOM 27 OP2 C A1126 -107.404 117.778 26.026 1.00 67.89 O
ATOM 28 O5' C A1126 -105.294 119.056 25.556 1.00 67.89 O
TER
ATOM 1 O3' U B1123 -110.371 108.839 22.100 1.00 65.34 O
ATOM 2 P U B1124 -111.604 109.752 22.578 1.00 76.27 P
ATOM 3 OP1 U B1124 -112.732 108.836 22.869 1.00 76.27 O
ATOM 4 OP2 U B1124 -111.787 110.808 21.547 1.00 76.27 O
ATOM 5 O5' U B1124 -111.060 110.401 23.937 1.00 76.27 O
ATOM 6 C5' U B1124 -111.928 111.116 24.824 1.00 76.27 C
ATOM 7 C4' U B1124 -111.231 111.485 26.124 1.00 76.27 C
ATOM 8 O4' U B1124 -110.804 110.270 26.800 1.00 76.27 O
ATOM 9 C3' U B1124 -109.978 112.333 25.968 1.00 76.27 C
ATOM 10 O3' U B1124 -109.788 113.136 27.129 1.00 76.27 O
ATOM 11 C2' U B1124 -108.879 111.288 25.887 1.00 76.27 C
ATOM 12 O2' U B1124 -107.600 111.756 26.250 1.00 76.27 O
ATOM 13 C1' U B1124 -109.386 110.213 26.848 1.00 76.27 C
ATOM 14 N1 U B1124 -108.973 108.837 26.468 1.00 75.97 N
ATOM 15 C2 U B1124 -107.672 108.426 26.701 1.00 75.97 C
ATOM 16 O2 U B1124 -106.838 109.142 27.219 1.00 75.97 O
ATOM 17 N3 U B1124 -107.382 107.142 26.315 1.00 75.97 N
ATOM 18 C4 U B1124 -108.244 106.245 25.726 1.00 75.97 C
ATOM 19 O4 U B1124 -107.841 105.124 25.433 1.00 75.97 O
ATOM 20 C5 U B1124 -109.570 106.731 25.508 1.00 75.97 C
ATOM 21 C6 U B1124 -109.875 107.979 25.876 1.00 75.97 C
ATOM 22 P G B1125 -109.162 114.614 26.992 1.00 70.56 P
ATOM 23 OP1 G B1125 -109.102 115.192 28.362 1.00 70.56 O
ATOM 24 OP2 G B1125 -109.952 115.329 25.953 1.00 70.56 O
ATOM 25 O5' G B1125 -107.677 114.333 26.450 1.00 70.56 O
TER
ATOM 2 P G A1125 -109.162 114.614 26.992 1.00 70.56 P
ATOM 3 OP1 G A1125 -109.102 115.192 28.362 1.00 70.56 O
ATOM 4 OP2 G A1125 -109.952 115.329 25.953 1.00 70.56 O
ATOM 5 O5' G A1125 -107.677 114.333 26.450 1.00 70.56 O
ATOM 6 C5' G A1125 -106.597 114.090 27.351 1.00 70.56 C
ATOM 7 C4' G A1125 -105.268 114.554 26.792 1.00 70.56 C
ATOM 8 O4' G A1125 -104.773 113.605 25.818 1.00 70.56 O
ATOM 9 C3' G A1125 -105.278 115.879 26.053 1.00 70.56 C
ATOM 10 O3' G A1125 -105.238 116.987 26.930 1.00 70.56 O
ATOM 11 C2' G A1125 -104.061 115.777 25.140 1.00 70.56 C
ATOM 12 O2' G A1125 -102.873 116.123 25.833 1.00 70.56 O
ATOM 13 C1' G A1125 -104.022 114.279 24.827 1.00 70.56 C
ATOM 14 N9 G A1125 -104.593 113.950 23.505 1.00 69.97 N
ATOM 15 C8 G A1125 -105.825 113.358 23.379 1.00 69.97 C
ATOM 16 N7 G A1125 -106.148 113.106 22.147 1.00 69.97 N
ATOM 17 C5 G A1125 -105.059 113.538 21.401 1.00 69.97 C
ATOM 18 C6 G A1125 -104.882 113.503 19.995 1.00 69.97 C
ATOM 19 O6 G A1125 -105.667 113.076 19.149 1.00 69.97 O
ATOM 20 N1 G A1125 -103.663 114.023 19.598 1.00 69.97 N
ATOM 21 C2 G A1125 -102.729 114.524 20.458 1.00 69.97 C
ATOM 22 N2 G A1125 -101.638 114.980 19.831 1.00 69.97 N
ATOM 23 N3 G A1125 -102.867 114.574 21.791 1.00 69.97 N
ATOM 24 C4 G A1125 -104.063 114.060 22.211 1.00 69.97 C
ATOM 25 P C A1126 -106.150 118.271 26.638 1.00 67.89 P
ATOM 26 OP1 C A1126 -106.229 119.060 27.898 1.00 67.89 O
ATOM 27 OP2 C A1126 -107.404 117.778 26.026 1.00 67.89 O
ATOM 28 O5' C A1126 -105.294 119.056 25.556 1.00 67.89 O
TER
ATOM 1 O3' U B1123 -110.371 108.839 22.100 1.00 65.34 O
ATOM 2 P U B1124 -111.604 109.752 22.578 1.00 76.27 P
ATOM 3 OP1 U B1124 -112.732 108.836 22.869 1.00 76.27 O
ATOM 4 OP2 U B1124 -111.787 110.808 21.547 1.00 76.27 O
ATOM 5 O5' U B1124 -111.060 110.401 23.937 1.00 76.27 O
ATOM 6 C5' U B1124 -111.928 111.116 24.824 1.00 76.27 C
ATOM 7 C4' U B1124 -111.231 111.485 26.124 1.00 76.27 C
ATOM 8 O4' U B1124 -110.804 110.270 26.800 1.00 76.27 O
ATOM 9 C3' U B1124 -109.978 112.333 25.968 1.00 76.27 C
ATOM 10 O3' U B1124 -109.788 113.136 27.129 1.00 76.27 O
ATOM 11 C2' U B1124 -108.879 111.288 25.887 1.00 76.27 C
ATOM 12 O2' U B1124 -107.600 111.756 26.250 1.00 76.27 O
ATOM 13 C1' U B1124 -109.386 110.213 26.848 1.00 76.27 C
ATOM 14 N1 U B1124 -108.973 108.837 26.468 1.00 75.97 N
ATOM 15 C2 U B1124 -107.672 108.426 26.701 1.00 75.97 C
ATOM 16 O2 U B1124 -106.838 109.142 27.219 1.00 75.97 O
ATOM 17 N3 U B1124 -107.382 107.142 26.315 1.00 75.97 N
ATOM 18 C4 U B1124 -108.244 106.245 25.726 1.00 75.97 C
ATOM 19 O4 U B1124 -107.841 105.124 25.433 1.00 75.97 O
ATOM 20 C5 U B1124 -109.570 106.731 25.508 1.00 75.97 C
ATOM 21 C6 U B1124 -109.875 107.979 25.876 1.00 75.97 C
ATOM 22 P G B1125 -109.162 114.614 26.992 1.00 70.56 P
ATOM 23 OP1 G B1125 -109.102 115.192 28.362 1.00 70.56 O
ATOM 24 OP2 G B1125 -109.952 115.329 25.953 1.00 70.56 O
ATOM 25 O5' G B1125 -107.677 114.333 26.450 1.00 70.56 O
TER
Atoms:
OP1: (-109.102,115.192,28.362)
OP2: (-109.952,115.329,25.953)
C3': (-105.278,115.879,26.053)
C1': (-104.022,114.279,24.827)
C5': (-106.597,114.090,27.351)
O6: (-105.667,113.076,19.149)
O4': (-104.773,113.605,25.818)
C8: (-105.825,113.358,23.379)
C2: (-102.729,114.524,20.458)
C6: (-104.882,113.503,19.995)
C5: (-105.059,113.538,21.401)
C4: (-104.063,114.060,22.211)
P: (-109.162,114.614,26.992)
C4': (-105.268,114.554,26.792)
C2': (-104.061,115.777,25.140)
O2': (-102.873,116.123,25.833)
N1: (-103.663,114.023,19.598)
N2: (-101.638,114.980,19.831)
N3: (-102.867,114.574,21.791)
N7: (-106.148,113.106,22.147)
N9: (-104.593,113.950,23.505)
O5': (-107.677,114.333,26.450)
O3': (-105.238,116.987,26.930)
OP2: (-109.952,115.329,25.953)
C3': (-105.278,115.879,26.053)
C1': (-104.022,114.279,24.827)
C5': (-106.597,114.090,27.351)
O6: (-105.667,113.076,19.149)
O4': (-104.773,113.605,25.818)
C8: (-105.825,113.358,23.379)
C2: (-102.729,114.524,20.458)
C6: (-104.882,113.503,19.995)
C5: (-105.059,113.538,21.401)
C4: (-104.063,114.060,22.211)
P: (-109.162,114.614,26.992)
C4': (-105.268,114.554,26.792)
C2': (-104.061,115.777,25.140)
O2': (-102.873,116.123,25.833)
N1: (-103.663,114.023,19.598)
N2: (-101.638,114.980,19.831)
N3: (-102.867,114.574,21.791)
N7: (-106.148,113.106,22.147)
N9: (-104.593,113.950,23.505)
O5': (-107.677,114.333,26.450)
O3': (-105.238,116.987,26.930)
C4: (-108.244,106.245,25.726)
N3: (-107.382,107.142,26.315)
OP1: (-112.732,108.836,22.869)
OP2: (-111.787,110.808,21.547)
C2: (-107.672,108.426,26.701)
C1': (-109.386,110.213,26.848)
C3': (-109.978,112.333,25.968)
O5': (-111.060,110.401,23.937)
O4': (-110.804,110.270,26.800)
C5': (-111.928,111.116,24.824)
P: (-111.604,109.752,22.578)
C4': (-111.231,111.485,26.124)
C2': (-108.879,111.288,25.887)
O2': (-107.600,111.756,26.250)
N1: (-108.973,108.837,26.468)
O4: (-107.841,105.124,25.433)
O2: (-106.838,109.142,27.219)
C6: (-109.875,107.979,25.876)
C5: (-109.570,106.731,25.508)
O3': (-109.788,113.136,27.129)
N3: (-107.382,107.142,26.315)
OP1: (-112.732,108.836,22.869)
OP2: (-111.787,110.808,21.547)
C2: (-107.672,108.426,26.701)
C1': (-109.386,110.213,26.848)
C3': (-109.978,112.333,25.968)
O5': (-111.060,110.401,23.937)
O4': (-110.804,110.270,26.800)
C5': (-111.928,111.116,24.824)
P: (-111.604,109.752,22.578)
C4': (-111.231,111.485,26.124)
C2': (-108.879,111.288,25.887)
O2': (-107.600,111.756,26.250)
N1: (-108.973,108.837,26.468)
O4: (-107.841,105.124,25.433)
O2: (-106.838,109.142,27.219)
C6: (-109.875,107.979,25.876)
C5: (-109.570,106.731,25.508)
O3': (-109.788,113.136,27.129)
Image (generated by PyMOL):