Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02034:02679
Extra
PDB:
ATOM 1 O3' C A2033 39.371 149.838 103.010 1.00 35.05 O
ATOM 2 P C A2034 40.945 149.536 103.103 1.00 34.16 P
ATOM 3 OP1 C A2034 41.535 149.905 101.804 1.00 32.55 O
ATOM 4 OP2 C A2034 41.144 148.166 103.644 1.00 32.89 O
ATOM 5 O5' C A2034 41.469 150.553 104.201 1.00 32.12 O
ATOM 6 C5' C A2034 41.450 151.957 103.962 1.00 31.44 C
ATOM 7 C4' C A2034 42.223 152.657 105.038 1.00 31.53 C
ATOM 8 O4' C A2034 41.576 152.427 106.314 1.00 31.57 O
ATOM 9 C3' C A2034 43.629 152.131 105.252 1.00 30.10 C
ATOM 10 O3' C A2034 44.542 152.667 104.313 1.00 31.10 O
ATOM 11 C2' C A2034 43.919 152.582 106.671 1.00 30.93 C
ATOM 12 O2' C A2034 44.217 153.962 106.734 1.00 28.06 O
ATOM 13 C1' C A2034 42.561 152.337 107.336 1.00 31.73 C
ATOM 14 N1 C A2034 42.434 151.023 108.011 1.00 30.42 N
ATOM 15 C2 C A2034 43.060 150.828 109.251 1.00 29.67 C
ATOM 16 O2 C A2034 43.732 151.745 109.741 1.00 32.20 O
ATOM 17 N3 C A2034 42.920 149.646 109.883 1.00 28.95 N
ATOM 18 C4 C A2034 42.195 148.680 109.332 1.00 27.81 C
ATOM 19 N4 C A2034 42.062 147.542 110.006 1.00 26.40 N
ATOM 20 C5 C A2034 41.566 148.839 108.069 1.00 30.66 C
ATOM 21 C6 C A2034 41.710 150.014 107.447 1.00 30.39 C
ATOM 22 P A A2035 45.792 151.783 103.848 1.00 33.10 P
ATOM 23 OP1 A A2035 46.525 152.533 102.802 1.00 34.72 O
ATOM 24 OP2 A A2035 45.303 150.417 103.562 1.00 33.17 O
ATOM 25 O5' A A2035 46.709 151.743 105.145 1.00 34.07 O
TER
ATOM 1 O3' C B2678 47.629 159.076 115.954 1.00 38.32 O
ATOM 2 P A B2679 48.962 158.643 115.163 1.00 42.53 P
ATOM 3 OP1 A B2679 49.001 157.156 115.175 1.00 41.68 O
ATOM 4 OP2 A B2679 50.111 159.406 115.709 1.00 42.11 O
ATOM 5 O5' A B2679 48.712 159.132 113.664 1.00 39.43 O
ATOM 6 C5' A B2679 49.409 160.267 113.133 1.00 37.54 C
ATOM 7 C4' A B2679 49.398 160.246 111.620 1.00 37.27 C
ATOM 8 O4' A B2679 50.015 159.021 111.141 1.00 37.69 O
ATOM 9 C3' A B2679 48.046 160.268 110.931 1.00 36.89 C
ATOM 10 O3' A B2679 47.519 161.580 110.834 1.00 37.62 O
ATOM 11 C2' A B2679 48.394 159.706 109.562 1.00 36.91 C
ATOM 12 O2' A B2679 49.028 160.659 108.727 1.00 37.30 O
ATOM 13 C1' A B2679 49.377 158.597 109.947 1.00 36.28 C
ATOM 14 N9 A B2679 48.662 157.362 110.252 1.00 34.88 N
ATOM 15 C8 A B2679 48.693 156.643 111.417 1.00 34.96 C
ATOM 16 N7 A B2679 47.877 155.623 111.429 1.00 35.65 N
ATOM 17 C5 A B2679 47.279 155.661 110.181 1.00 35.55 C
ATOM 18 C6 A B2679 46.306 154.856 109.579 1.00 36.66 C
ATOM 19 N6 A B2679 45.715 153.830 110.192 1.00 37.20 N
ATOM 20 N1 A B2679 45.946 155.149 108.311 1.00 37.85 N
ATOM 21 C2 A B2679 46.524 156.198 107.705 1.00 37.31 C
ATOM 22 N3 A B2679 47.437 157.039 108.175 1.00 36.40 N
ATOM 23 C4 A B2679 47.775 156.711 109.435 1.00 35.60 C
ATOM 24 P A B2680 45.951 161.834 111.085 1.00 39.58 P
ATOM 25 OP1 A B2680 45.770 163.310 111.035 1.00 40.19 O
ATOM 26 OP2 A B2680 45.505 161.079 112.281 1.00 36.15 O
ATOM 27 O5' A B2680 45.222 161.168 109.832 1.00 38.09 O
TER
ATOM 2 P C A2034 40.945 149.536 103.103 1.00 34.16 P
ATOM 3 OP1 C A2034 41.535 149.905 101.804 1.00 32.55 O
ATOM 4 OP2 C A2034 41.144 148.166 103.644 1.00 32.89 O
ATOM 5 O5' C A2034 41.469 150.553 104.201 1.00 32.12 O
ATOM 6 C5' C A2034 41.450 151.957 103.962 1.00 31.44 C
ATOM 7 C4' C A2034 42.223 152.657 105.038 1.00 31.53 C
ATOM 8 O4' C A2034 41.576 152.427 106.314 1.00 31.57 O
ATOM 9 C3' C A2034 43.629 152.131 105.252 1.00 30.10 C
ATOM 10 O3' C A2034 44.542 152.667 104.313 1.00 31.10 O
ATOM 11 C2' C A2034 43.919 152.582 106.671 1.00 30.93 C
ATOM 12 O2' C A2034 44.217 153.962 106.734 1.00 28.06 O
ATOM 13 C1' C A2034 42.561 152.337 107.336 1.00 31.73 C
ATOM 14 N1 C A2034 42.434 151.023 108.011 1.00 30.42 N
ATOM 15 C2 C A2034 43.060 150.828 109.251 1.00 29.67 C
ATOM 16 O2 C A2034 43.732 151.745 109.741 1.00 32.20 O
ATOM 17 N3 C A2034 42.920 149.646 109.883 1.00 28.95 N
ATOM 18 C4 C A2034 42.195 148.680 109.332 1.00 27.81 C
ATOM 19 N4 C A2034 42.062 147.542 110.006 1.00 26.40 N
ATOM 20 C5 C A2034 41.566 148.839 108.069 1.00 30.66 C
ATOM 21 C6 C A2034 41.710 150.014 107.447 1.00 30.39 C
ATOM 22 P A A2035 45.792 151.783 103.848 1.00 33.10 P
ATOM 23 OP1 A A2035 46.525 152.533 102.802 1.00 34.72 O
ATOM 24 OP2 A A2035 45.303 150.417 103.562 1.00 33.17 O
ATOM 25 O5' A A2035 46.709 151.743 105.145 1.00 34.07 O
TER
ATOM 1 O3' C B2678 47.629 159.076 115.954 1.00 38.32 O
ATOM 2 P A B2679 48.962 158.643 115.163 1.00 42.53 P
ATOM 3 OP1 A B2679 49.001 157.156 115.175 1.00 41.68 O
ATOM 4 OP2 A B2679 50.111 159.406 115.709 1.00 42.11 O
ATOM 5 O5' A B2679 48.712 159.132 113.664 1.00 39.43 O
ATOM 6 C5' A B2679 49.409 160.267 113.133 1.00 37.54 C
ATOM 7 C4' A B2679 49.398 160.246 111.620 1.00 37.27 C
ATOM 8 O4' A B2679 50.015 159.021 111.141 1.00 37.69 O
ATOM 9 C3' A B2679 48.046 160.268 110.931 1.00 36.89 C
ATOM 10 O3' A B2679 47.519 161.580 110.834 1.00 37.62 O
ATOM 11 C2' A B2679 48.394 159.706 109.562 1.00 36.91 C
ATOM 12 O2' A B2679 49.028 160.659 108.727 1.00 37.30 O
ATOM 13 C1' A B2679 49.377 158.597 109.947 1.00 36.28 C
ATOM 14 N9 A B2679 48.662 157.362 110.252 1.00 34.88 N
ATOM 15 C8 A B2679 48.693 156.643 111.417 1.00 34.96 C
ATOM 16 N7 A B2679 47.877 155.623 111.429 1.00 35.65 N
ATOM 17 C5 A B2679 47.279 155.661 110.181 1.00 35.55 C
ATOM 18 C6 A B2679 46.306 154.856 109.579 1.00 36.66 C
ATOM 19 N6 A B2679 45.715 153.830 110.192 1.00 37.20 N
ATOM 20 N1 A B2679 45.946 155.149 108.311 1.00 37.85 N
ATOM 21 C2 A B2679 46.524 156.198 107.705 1.00 37.31 C
ATOM 22 N3 A B2679 47.437 157.039 108.175 1.00 36.40 N
ATOM 23 C4 A B2679 47.775 156.711 109.435 1.00 35.60 C
ATOM 24 P A B2680 45.951 161.834 111.085 1.00 39.58 P
ATOM 25 OP1 A B2680 45.770 163.310 111.035 1.00 40.19 O
ATOM 26 OP2 A B2680 45.505 161.079 112.281 1.00 36.15 O
ATOM 27 O5' A B2680 45.222 161.168 109.832 1.00 38.09 O
TER
Atoms:
C2: (43.060,150.828,109.251)
OP1: (41.535,149.905,101.804)
OP2: (41.144,148.166,103.644)
C4: (42.195,148.680,109.332)
O5': (41.469,150.553,104.201)
C3': (43.629,152.131,105.252)
C1': (42.561,152.337,107.336)
O4': (41.576,152.427,106.314)
C5': (41.450,151.957,103.962)
P: (40.945,149.536,103.103)
O2: (43.732,151.745,109.741)
C4': (42.223,152.657,105.038)
C2': (43.919,152.582,106.671)
O2': (44.217,153.962,106.734)
N1: (42.434,151.023,108.011)
N3: (42.920,149.646,109.883)
N4: (42.062,147.542,110.006)
C6: (41.710,150.014,107.447)
C5: (41.566,148.839,108.069)
O3': (44.542,152.667,104.313)
OP1: (41.535,149.905,101.804)
OP2: (41.144,148.166,103.644)
C4: (42.195,148.680,109.332)
O5': (41.469,150.553,104.201)
C3': (43.629,152.131,105.252)
C1': (42.561,152.337,107.336)
O4': (41.576,152.427,106.314)
C5': (41.450,151.957,103.962)
P: (40.945,149.536,103.103)
O2: (43.732,151.745,109.741)
C4': (42.223,152.657,105.038)
C2': (43.919,152.582,106.671)
O2': (44.217,153.962,106.734)
N1: (42.434,151.023,108.011)
N3: (42.920,149.646,109.883)
N4: (42.062,147.542,110.006)
C6: (41.710,150.014,107.447)
C5: (41.566,148.839,108.069)
O3': (44.542,152.667,104.313)
OP1: (49.001,157.156,115.175)
OP2: (50.111,159.406,115.709)
C3': (48.046,160.268,110.931)
C1': (49.377,158.597,109.947)
C5': (49.409,160.267,113.133)
O4': (50.015,159.021,111.141)
C8: (48.693,156.643,111.417)
O2': (49.028,160.659,108.727)
C6: (46.306,154.856,109.579)
C5: (47.279,155.661,110.181)
C4: (47.775,156.711,109.435)
P: (48.962,158.643,115.163)
C4': (49.398,160.246,111.620)
C2': (48.394,159.706,109.562)
C2: (46.524,156.198,107.705)
N1: (45.946,155.149,108.311)
N3: (47.437,157.039,108.175)
N6: (45.715,153.830,110.192)
N7: (47.877,155.623,111.429)
N9: (48.662,157.362,110.252)
O5': (48.712,159.132,113.664)
O3': (47.519,161.580,110.834)
OP2: (50.111,159.406,115.709)
C3': (48.046,160.268,110.931)
C1': (49.377,158.597,109.947)
C5': (49.409,160.267,113.133)
O4': (50.015,159.021,111.141)
C8: (48.693,156.643,111.417)
O2': (49.028,160.659,108.727)
C6: (46.306,154.856,109.579)
C5: (47.279,155.661,110.181)
C4: (47.775,156.711,109.435)
P: (48.962,158.643,115.163)
C4': (49.398,160.246,111.620)
C2': (48.394,159.706,109.562)
C2: (46.524,156.198,107.705)
N1: (45.946,155.149,108.311)
N3: (47.437,157.039,108.175)
N6: (45.715,153.830,110.192)
N7: (47.877,155.623,111.429)
N9: (48.662,157.362,110.252)
O5': (48.712,159.132,113.664)
O3': (47.519,161.580,110.834)
Image (generated by PyMOL):