Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:A5:C6
Extra
PDB:
ATOM 1 P G A 5 32.285 13.020 56.101 1.00 64.57 P
ATOM 2 OP1 G A 5 30.921 12.450 56.340 1.00 53.94 O
ATOM 3 OP2 G A 5 33.259 13.225 57.221 1.00 53.04 O
ATOM 4 O5' G A 5 33.060 12.058 55.088 1.00 62.97 O
ATOM 5 C5' G A 5 32.509 11.819 53.816 1.00 62.85 C
ATOM 6 C4' G A 5 32.226 10.358 53.596 1.00 58.38 C
ATOM 7 O4' G A 5 31.562 10.228 52.325 1.00 52.06 O
ATOM 8 C3' G A 5 33.492 9.524 53.526 1.00 57.39 C
ATOM 9 O3' G A 5 33.245 8.211 54.038 1.00 56.90 O
ATOM 10 C2' G A 5 33.815 9.471 52.034 1.00 54.02 C
ATOM 11 O2' G A 5 34.355 8.248 51.595 1.00 61.02 O
ATOM 12 C1' G A 5 32.421 9.612 51.416 1.00 52.54 C
ATOM 13 N9 G A 5 32.235 10.207 50.098 1.00 53.24 N
ATOM 14 C8 G A 5 31.312 9.821 49.151 1.00 52.03 C
ATOM 15 N7 G A 5 31.419 10.476 48.032 1.00 53.35 N
ATOM 16 C5 G A 5 32.473 11.352 48.257 1.00 51.42 C
ATOM 17 C6 G A 5 33.077 12.286 47.391 1.00 53.13 C
ATOM 18 O6 G A 5 32.831 12.502 46.188 1.00 53.80 O
ATOM 19 N1 G A 5 34.089 13.000 48.044 1.00 53.56 N
ATOM 20 C2 G A 5 34.487 12.812 49.357 1.00 51.53 C
ATOM 21 N2 G A 5 35.468 13.596 49.828 1.00 53.72 N
ATOM 22 N3 G A 5 33.959 11.919 50.154 1.00 51.81 N
ATOM 23 C4 G A 5 32.961 11.225 49.542 1.00 51.95 C
ATOM 24 P U A 6 33.689 7.765 55.509 1.00 62.90 P
ATOM 25 OP1 U A 6 33.241 6.362 55.591 1.00 69.24 O
ATOM 26 OP2 U A 6 33.262 8.726 56.526 1.00 64.86 O
ATOM 27 O5' U A 6 35.276 7.744 55.472 1.00 59.08 O
TER
ATOM 1 O3' G B 5 26.491 4.562 47.069 1.00 65.05 O
ATOM 2 P U B 6 25.074 4.574 47.840 1.00 67.03 P
ATOM 3 OP1 U B 6 25.183 3.487 48.847 1.00 63.01 O
ATOM 4 OP2 U B 6 23.984 4.552 46.826 1.00 61.85 O
ATOM 5 O5' U B 6 25.053 5.977 48.609 1.00 69.04 O
ATOM 6 C5' U B 6 24.300 6.157 49.806 1.00 67.72 C
ATOM 7 C4' U B 6 25.106 6.923 50.842 1.00 68.13 C
ATOM 8 O4' U B 6 26.282 6.152 51.250 1.00 70.31 O
ATOM 9 C3' U B 6 25.662 8.215 50.218 1.00 65.88 C
ATOM 10 O3' U B 6 25.595 9.340 51.099 1.00 62.09 O
ATOM 11 C2' U B 6 27.108 7.901 49.832 1.00 68.97 C
ATOM 12 O2' U B 6 28.025 8.962 49.993 1.00 72.55 O
ATOM 13 C1' U B 6 27.453 6.850 50.877 1.00 68.94 C
ATOM 14 N1 U B 6 28.567 5.977 50.534 1.00 68.76 N
ATOM 15 C2 U B 6 29.787 6.285 51.153 1.00 69.50 C
ATOM 16 O2 U B 6 29.931 7.173 51.968 1.00 69.58 O
ATOM 17 N3 U B 6 30.828 5.471 50.776 1.00 70.50 N
ATOM 18 C4 U B 6 30.762 4.423 49.871 1.00 72.30 C
ATOM 19 O4 U B 6 31.763 3.755 49.626 1.00 72.90 O
ATOM 20 C5 U B 6 29.474 4.195 49.291 1.00 71.73 C
ATOM 21 C6 U B 6 28.447 4.975 49.633 1.00 69.86 C
TER
ATOM 2 OP1 G A 5 30.921 12.450 56.340 1.00 53.94 O
ATOM 3 OP2 G A 5 33.259 13.225 57.221 1.00 53.04 O
ATOM 4 O5' G A 5 33.060 12.058 55.088 1.00 62.97 O
ATOM 5 C5' G A 5 32.509 11.819 53.816 1.00 62.85 C
ATOM 6 C4' G A 5 32.226 10.358 53.596 1.00 58.38 C
ATOM 7 O4' G A 5 31.562 10.228 52.325 1.00 52.06 O
ATOM 8 C3' G A 5 33.492 9.524 53.526 1.00 57.39 C
ATOM 9 O3' G A 5 33.245 8.211 54.038 1.00 56.90 O
ATOM 10 C2' G A 5 33.815 9.471 52.034 1.00 54.02 C
ATOM 11 O2' G A 5 34.355 8.248 51.595 1.00 61.02 O
ATOM 12 C1' G A 5 32.421 9.612 51.416 1.00 52.54 C
ATOM 13 N9 G A 5 32.235 10.207 50.098 1.00 53.24 N
ATOM 14 C8 G A 5 31.312 9.821 49.151 1.00 52.03 C
ATOM 15 N7 G A 5 31.419 10.476 48.032 1.00 53.35 N
ATOM 16 C5 G A 5 32.473 11.352 48.257 1.00 51.42 C
ATOM 17 C6 G A 5 33.077 12.286 47.391 1.00 53.13 C
ATOM 18 O6 G A 5 32.831 12.502 46.188 1.00 53.80 O
ATOM 19 N1 G A 5 34.089 13.000 48.044 1.00 53.56 N
ATOM 20 C2 G A 5 34.487 12.812 49.357 1.00 51.53 C
ATOM 21 N2 G A 5 35.468 13.596 49.828 1.00 53.72 N
ATOM 22 N3 G A 5 33.959 11.919 50.154 1.00 51.81 N
ATOM 23 C4 G A 5 32.961 11.225 49.542 1.00 51.95 C
ATOM 24 P U A 6 33.689 7.765 55.509 1.00 62.90 P
ATOM 25 OP1 U A 6 33.241 6.362 55.591 1.00 69.24 O
ATOM 26 OP2 U A 6 33.262 8.726 56.526 1.00 64.86 O
ATOM 27 O5' U A 6 35.276 7.744 55.472 1.00 59.08 O
TER
ATOM 1 O3' G B 5 26.491 4.562 47.069 1.00 65.05 O
ATOM 2 P U B 6 25.074 4.574 47.840 1.00 67.03 P
ATOM 3 OP1 U B 6 25.183 3.487 48.847 1.00 63.01 O
ATOM 4 OP2 U B 6 23.984 4.552 46.826 1.00 61.85 O
ATOM 5 O5' U B 6 25.053 5.977 48.609 1.00 69.04 O
ATOM 6 C5' U B 6 24.300 6.157 49.806 1.00 67.72 C
ATOM 7 C4' U B 6 25.106 6.923 50.842 1.00 68.13 C
ATOM 8 O4' U B 6 26.282 6.152 51.250 1.00 70.31 O
ATOM 9 C3' U B 6 25.662 8.215 50.218 1.00 65.88 C
ATOM 10 O3' U B 6 25.595 9.340 51.099 1.00 62.09 O
ATOM 11 C2' U B 6 27.108 7.901 49.832 1.00 68.97 C
ATOM 12 O2' U B 6 28.025 8.962 49.993 1.00 72.55 O
ATOM 13 C1' U B 6 27.453 6.850 50.877 1.00 68.94 C
ATOM 14 N1 U B 6 28.567 5.977 50.534 1.00 68.76 N
ATOM 15 C2 U B 6 29.787 6.285 51.153 1.00 69.50 C
ATOM 16 O2 U B 6 29.931 7.173 51.968 1.00 69.58 O
ATOM 17 N3 U B 6 30.828 5.471 50.776 1.00 70.50 N
ATOM 18 C4 U B 6 30.762 4.423 49.871 1.00 72.30 C
ATOM 19 O4 U B 6 31.763 3.755 49.626 1.00 72.90 O
ATOM 20 C5 U B 6 29.474 4.195 49.291 1.00 71.73 C
ATOM 21 C6 U B 6 28.447 4.975 49.633 1.00 69.86 C
TER
Atoms:
OP1: (30.921,12.450,56.340)
OP2: (33.259,13.225,57.221)
C3': (33.492,9.524,53.526)
C1': (32.421,9.612,51.416)
C5': (32.509,11.819,53.816)
O6: (32.831,12.502,46.188)
O4': (31.562,10.228,52.325)
C8: (31.312,9.821,49.151)
C2: (34.487,12.812,49.357)
C6: (33.077,12.286,47.391)
C5: (32.473,11.352,48.257)
C4: (32.961,11.225,49.542)
P: (32.285,13.020,56.101)
C4': (32.226,10.358,53.596)
C2': (33.815,9.471,52.034)
O2': (34.355,8.248,51.595)
N1: (34.089,13.000,48.044)
N2: (35.468,13.596,49.828)
N3: (33.959,11.919,50.154)
N7: (31.419,10.476,48.032)
N9: (32.235,10.207,50.098)
O5': (33.060,12.058,55.088)
O3': (33.245,8.211,54.038)
OP2: (33.259,13.225,57.221)
C3': (33.492,9.524,53.526)
C1': (32.421,9.612,51.416)
C5': (32.509,11.819,53.816)
O6: (32.831,12.502,46.188)
O4': (31.562,10.228,52.325)
C8: (31.312,9.821,49.151)
C2: (34.487,12.812,49.357)
C6: (33.077,12.286,47.391)
C5: (32.473,11.352,48.257)
C4: (32.961,11.225,49.542)
P: (32.285,13.020,56.101)
C4': (32.226,10.358,53.596)
C2': (33.815,9.471,52.034)
O2': (34.355,8.248,51.595)
N1: (34.089,13.000,48.044)
N2: (35.468,13.596,49.828)
N3: (33.959,11.919,50.154)
N7: (31.419,10.476,48.032)
N9: (32.235,10.207,50.098)
O5': (33.060,12.058,55.088)
O3': (33.245,8.211,54.038)
C4: (30.762,4.423,49.871)
N3: (30.828,5.471,50.776)
OP1: (25.183,3.487,48.847)
OP2: (23.984,4.552,46.826)
C2: (29.787,6.285,51.153)
C1': (27.453,6.850,50.877)
C3': (25.662,8.215,50.218)
O5': (25.053,5.977,48.609)
O4': (26.282,6.152,51.250)
C5': (24.300,6.157,49.806)
P: (25.074,4.574,47.840)
C4': (25.106,6.923,50.842)
C2': (27.108,7.901,49.832)
O2': (28.025,8.962,49.993)
N1: (28.567,5.977,50.534)
O4: (31.763,3.755,49.626)
O2: (29.931,7.173,51.968)
C6: (28.447,4.975,49.633)
C5: (29.474,4.195,49.291)
O3': (25.595,9.340,51.099)
N3: (30.828,5.471,50.776)
OP1: (25.183,3.487,48.847)
OP2: (23.984,4.552,46.826)
C2: (29.787,6.285,51.153)
C1': (27.453,6.850,50.877)
C3': (25.662,8.215,50.218)
O5': (25.053,5.977,48.609)
O4': (26.282,6.152,51.250)
C5': (24.300,6.157,49.806)
P: (25.074,4.574,47.840)
C4': (25.106,6.923,50.842)
C2': (27.108,7.901,49.832)
O2': (28.025,8.962,49.993)
N1: (28.567,5.977,50.534)
O4: (31.763,3.755,49.626)
O2: (29.931,7.173,51.968)
C6: (28.447,4.975,49.633)
C5: (29.474,4.195,49.291)
O3': (25.595,9.340,51.099)
Image (generated by PyMOL):