Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VC6:B20:B41
Extra
PDB:
ATOM 1 O3' U A 19 33.569 79.675 76.086 1.00 67.65 O
ATOM 2 P C A 20 33.934 78.478 75.063 1.00 69.46 P
ATOM 3 OP1 C A 20 34.658 79.030 73.885 1.00 66.85 O
ATOM 4 OP2 C A 20 32.673 77.687 74.866 1.00 68.56 O
ATOM 5 O5' C A 20 34.949 77.539 75.847 1.00 68.54 O
ATOM 6 C5' C A 20 34.489 76.629 76.816 1.00 69.87 C
ATOM 7 C4' C A 20 35.654 75.879 77.391 1.00 71.66 C
ATOM 8 O4' C A 20 36.211 75.001 76.384 1.00 71.75 O
ATOM 9 C3' C A 20 36.814 76.748 77.844 1.00 73.07 C
ATOM 10 O3' C A 20 36.572 77.158 79.185 1.00 75.77 O
ATOM 11 C2' C A 20 38.013 75.802 77.734 1.00 72.46 C
ATOM 12 O2' C A 20 38.136 74.963 78.869 1.00 73.49 O
ATOM 13 C1' C A 20 37.617 74.923 76.544 1.00 70.92 C
ATOM 14 N1 C A 20 38.242 75.235 75.249 1.00 68.97 N
ATOM 15 C2 C A 20 39.614 75.042 75.092 1.00 68.32 C
ATOM 16 O2 C A 20 40.283 74.672 76.066 1.00 67.64 O
ATOM 17 N3 C A 20 40.173 75.261 73.882 1.00 67.53 N
ATOM 18 C4 C A 20 39.418 75.667 72.859 1.00 67.05 C
ATOM 19 N4 C A 20 40.007 75.855 71.681 1.00 66.13 N
ATOM 20 C5 C A 20 38.023 75.896 72.999 1.00 66.11 C
ATOM 21 C6 C A 20 37.483 75.677 74.200 1.00 67.70 C
ATOM 22 P C A 21 36.850 78.672 79.618 1.00 77.11 P
ATOM 23 OP1 C A 21 36.099 78.930 80.866 1.00 76.03 O
ATOM 24 OP2 C A 21 36.662 79.550 78.444 1.00 76.57 O
ATOM 25 O5' C A 21 38.392 78.682 79.955 1.00 79.00 O
TER
ATOM 1 O3' C B 40 43.476 66.438 78.971 1.00 80.76 O
ATOM 2 P A B 41 44.120 65.637 80.203 1.00 83.95 P
ATOM 3 OP1 A B 41 45.533 66.096 80.347 1.00 83.57 O
ATOM 4 OP2 A B 41 43.821 64.190 80.026 1.00 83.64 O
ATOM 5 O5' A B 41 43.270 66.142 81.452 1.00 82.67 O
ATOM 6 C5' A B 41 43.897 66.637 82.629 1.00 80.07 C
ATOM 7 C4' A B 41 43.043 67.720 83.242 1.00 78.77 C
ATOM 8 O4' A B 41 43.438 69.033 82.765 1.00 78.71 O
ATOM 9 C3' A B 41 41.561 67.612 82.927 1.00 77.57 C
ATOM 10 O3' A B 41 40.912 66.693 83.795 1.00 75.81 O
ATOM 11 C2' A B 41 41.071 69.043 83.110 1.00 77.90 C
ATOM 12 O2' A B 41 40.762 69.327 84.455 1.00 77.74 O
ATOM 13 C1' A B 41 42.292 69.866 82.672 1.00 78.37 C
ATOM 14 N9 A B 41 42.191 70.362 81.296 1.00 78.49 N
ATOM 15 C8 A B 41 43.017 70.068 80.237 1.00 78.01 C
ATOM 16 N7 A B 41 42.649 70.627 79.108 1.00 77.24 N
ATOM 17 C5 A B 41 41.511 71.348 79.447 1.00 75.83 C
ATOM 18 C6 A B 41 40.642 72.157 78.692 1.00 74.47 C
ATOM 19 N6 A B 41 40.785 72.382 77.382 1.00 72.74 N
ATOM 20 N1 A B 41 39.607 72.735 79.335 1.00 73.46 N
ATOM 21 C2 A B 41 39.462 72.510 80.643 1.00 74.96 C
ATOM 22 N3 A B 41 40.203 71.766 81.460 1.00 75.92 N
ATOM 23 C4 A B 41 41.224 71.205 80.793 1.00 76.71 C
ATOM 24 P A B 42 39.639 65.861 83.266 1.00 76.54 P
ATOM 25 OP1 A B 42 39.324 64.774 84.224 1.00 76.29 O
ATOM 26 OP2 A B 42 39.854 65.540 81.831 1.00 76.18 O
ATOM 27 O5' A B 42 38.450 66.909 83.338 1.00 76.65 O
TER
ATOM 2 P C A 20 33.934 78.478 75.063 1.00 69.46 P
ATOM 3 OP1 C A 20 34.658 79.030 73.885 1.00 66.85 O
ATOM 4 OP2 C A 20 32.673 77.687 74.866 1.00 68.56 O
ATOM 5 O5' C A 20 34.949 77.539 75.847 1.00 68.54 O
ATOM 6 C5' C A 20 34.489 76.629 76.816 1.00 69.87 C
ATOM 7 C4' C A 20 35.654 75.879 77.391 1.00 71.66 C
ATOM 8 O4' C A 20 36.211 75.001 76.384 1.00 71.75 O
ATOM 9 C3' C A 20 36.814 76.748 77.844 1.00 73.07 C
ATOM 10 O3' C A 20 36.572 77.158 79.185 1.00 75.77 O
ATOM 11 C2' C A 20 38.013 75.802 77.734 1.00 72.46 C
ATOM 12 O2' C A 20 38.136 74.963 78.869 1.00 73.49 O
ATOM 13 C1' C A 20 37.617 74.923 76.544 1.00 70.92 C
ATOM 14 N1 C A 20 38.242 75.235 75.249 1.00 68.97 N
ATOM 15 C2 C A 20 39.614 75.042 75.092 1.00 68.32 C
ATOM 16 O2 C A 20 40.283 74.672 76.066 1.00 67.64 O
ATOM 17 N3 C A 20 40.173 75.261 73.882 1.00 67.53 N
ATOM 18 C4 C A 20 39.418 75.667 72.859 1.00 67.05 C
ATOM 19 N4 C A 20 40.007 75.855 71.681 1.00 66.13 N
ATOM 20 C5 C A 20 38.023 75.896 72.999 1.00 66.11 C
ATOM 21 C6 C A 20 37.483 75.677 74.200 1.00 67.70 C
ATOM 22 P C A 21 36.850 78.672 79.618 1.00 77.11 P
ATOM 23 OP1 C A 21 36.099 78.930 80.866 1.00 76.03 O
ATOM 24 OP2 C A 21 36.662 79.550 78.444 1.00 76.57 O
ATOM 25 O5' C A 21 38.392 78.682 79.955 1.00 79.00 O
TER
ATOM 1 O3' C B 40 43.476 66.438 78.971 1.00 80.76 O
ATOM 2 P A B 41 44.120 65.637 80.203 1.00 83.95 P
ATOM 3 OP1 A B 41 45.533 66.096 80.347 1.00 83.57 O
ATOM 4 OP2 A B 41 43.821 64.190 80.026 1.00 83.64 O
ATOM 5 O5' A B 41 43.270 66.142 81.452 1.00 82.67 O
ATOM 6 C5' A B 41 43.897 66.637 82.629 1.00 80.07 C
ATOM 7 C4' A B 41 43.043 67.720 83.242 1.00 78.77 C
ATOM 8 O4' A B 41 43.438 69.033 82.765 1.00 78.71 O
ATOM 9 C3' A B 41 41.561 67.612 82.927 1.00 77.57 C
ATOM 10 O3' A B 41 40.912 66.693 83.795 1.00 75.81 O
ATOM 11 C2' A B 41 41.071 69.043 83.110 1.00 77.90 C
ATOM 12 O2' A B 41 40.762 69.327 84.455 1.00 77.74 O
ATOM 13 C1' A B 41 42.292 69.866 82.672 1.00 78.37 C
ATOM 14 N9 A B 41 42.191 70.362 81.296 1.00 78.49 N
ATOM 15 C8 A B 41 43.017 70.068 80.237 1.00 78.01 C
ATOM 16 N7 A B 41 42.649 70.627 79.108 1.00 77.24 N
ATOM 17 C5 A B 41 41.511 71.348 79.447 1.00 75.83 C
ATOM 18 C6 A B 41 40.642 72.157 78.692 1.00 74.47 C
ATOM 19 N6 A B 41 40.785 72.382 77.382 1.00 72.74 N
ATOM 20 N1 A B 41 39.607 72.735 79.335 1.00 73.46 N
ATOM 21 C2 A B 41 39.462 72.510 80.643 1.00 74.96 C
ATOM 22 N3 A B 41 40.203 71.766 81.460 1.00 75.92 N
ATOM 23 C4 A B 41 41.224 71.205 80.793 1.00 76.71 C
ATOM 24 P A B 42 39.639 65.861 83.266 1.00 76.54 P
ATOM 25 OP1 A B 42 39.324 64.774 84.224 1.00 76.29 O
ATOM 26 OP2 A B 42 39.854 65.540 81.831 1.00 76.18 O
ATOM 27 O5' A B 42 38.450 66.909 83.338 1.00 76.65 O
TER
Atoms:
C2: (39.614,75.042,75.092)
OP1: (34.658,79.030,73.885)
OP2: (32.673,77.687,74.866)
C4: (39.418,75.667,72.859)
O5': (34.949,77.539,75.847)
C3': (36.814,76.748,77.844)
C1': (37.617,74.923,76.544)
O4': (36.211,75.001,76.384)
C5': (34.489,76.629,76.816)
P: (33.934,78.478,75.063)
O2: (40.283,74.672,76.066)
C4': (35.654,75.879,77.391)
C2': (38.013,75.802,77.734)
O2': (38.136,74.963,78.869)
N1: (38.242,75.235,75.249)
N3: (40.173,75.261,73.882)
N4: (40.007,75.855,71.681)
C6: (37.483,75.677,74.200)
C5: (38.023,75.896,72.999)
O3': (36.572,77.158,79.185)
OP1: (34.658,79.030,73.885)
OP2: (32.673,77.687,74.866)
C4: (39.418,75.667,72.859)
O5': (34.949,77.539,75.847)
C3': (36.814,76.748,77.844)
C1': (37.617,74.923,76.544)
O4': (36.211,75.001,76.384)
C5': (34.489,76.629,76.816)
P: (33.934,78.478,75.063)
O2: (40.283,74.672,76.066)
C4': (35.654,75.879,77.391)
C2': (38.013,75.802,77.734)
O2': (38.136,74.963,78.869)
N1: (38.242,75.235,75.249)
N3: (40.173,75.261,73.882)
N4: (40.007,75.855,71.681)
C6: (37.483,75.677,74.200)
C5: (38.023,75.896,72.999)
O3': (36.572,77.158,79.185)
OP1: (45.533,66.096,80.347)
OP2: (43.821,64.190,80.026)
C3': (41.561,67.612,82.927)
C1': (42.292,69.866,82.672)
C5': (43.897,66.637,82.629)
O4': (43.438,69.033,82.765)
C8: (43.017,70.068,80.237)
O2': (40.762,69.327,84.455)
C6: (40.642,72.157,78.692)
C5: (41.511,71.348,79.447)
C4: (41.224,71.205,80.793)
P: (44.120,65.637,80.203)
C4': (43.043,67.720,83.242)
C2': (41.071,69.043,83.110)
C2: (39.462,72.510,80.643)
N1: (39.607,72.735,79.335)
N3: (40.203,71.766,81.460)
N6: (40.785,72.382,77.382)
N7: (42.649,70.627,79.108)
N9: (42.191,70.362,81.296)
O5': (43.270,66.142,81.452)
O3': (40.912,66.693,83.795)
OP2: (43.821,64.190,80.026)
C3': (41.561,67.612,82.927)
C1': (42.292,69.866,82.672)
C5': (43.897,66.637,82.629)
O4': (43.438,69.033,82.765)
C8: (43.017,70.068,80.237)
O2': (40.762,69.327,84.455)
C6: (40.642,72.157,78.692)
C5: (41.511,71.348,79.447)
C4: (41.224,71.205,80.793)
P: (44.120,65.637,80.203)
C4': (43.043,67.720,83.242)
C2': (41.071,69.043,83.110)
C2: (39.462,72.510,80.643)
N1: (39.607,72.735,79.335)
N3: (40.203,71.766,81.460)
N6: (40.785,72.382,77.382)
N7: (42.649,70.627,79.108)
N9: (42.191,70.362,81.296)
O5': (43.270,66.142,81.452)
O3': (40.912,66.693,83.795)
Image (generated by PyMOL):