Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.479 119.949 43.628 1.00 35.62 O
ATOM 2 P C A 26 47.228 119.837 42.210 1.00 37.58 P
ATOM 3 OP1 C A 26 48.183 118.701 42.300 1.00 37.52 O
ATOM 4 OP2 C A 26 47.723 121.179 41.820 1.00 37.56 O
ATOM 5 O5' C A 26 46.075 119.445 41.193 1.00 38.89 O
ATOM 6 C5' C A 26 45.348 118.220 41.352 1.00 38.90 C
ATOM 7 C4' C A 26 44.181 118.181 40.403 1.00 37.90 C
ATOM 8 O4' C A 26 43.297 119.298 40.684 1.00 37.62 O
ATOM 9 C3' C A 26 44.506 118.370 38.929 1.00 40.02 C
ATOM 10 O3' C A 26 45.000 117.200 38.308 1.00 41.28 O
ATOM 11 C2' C A 26 43.160 118.794 38.369 1.00 40.31 C
ATOM 12 O2' C A 26 42.260 117.707 38.269 1.00 40.68 O
ATOM 13 C1' C A 26 42.682 119.732 39.474 1.00 40.00 C
ATOM 14 N1 C A 26 43.066 121.132 39.216 1.00 40.55 N
ATOM 15 C2 C A 26 42.249 121.911 38.387 1.00 40.63 C
ATOM 16 O2 C A 26 41.266 121.383 37.839 1.00 39.03 O
ATOM 17 N3 C A 26 42.558 123.215 38.192 1.00 39.76 N
ATOM 18 C4 C A 26 43.643 123.740 38.769 1.00 40.09 C
ATOM 19 N4 C A 26 43.894 125.037 38.566 1.00 37.99 N
ATOM 20 C5 C A 26 44.515 122.961 39.585 1.00 40.09 C
ATOM 21 C6 C A 26 44.192 121.675 39.781 1.00 41.96 C
ATOM 22 P A A 27 46.011 117.340 37.063 1.00 43.85 P
ATOM 23 OP1 A A 27 46.521 115.982 36.755 1.00 44.62 O
ATOM 24 OP2 A A 27 46.976 118.441 37.310 1.00 44.58 O
ATOM 25 O5' A A 27 45.065 117.825 35.881 1.00 45.08 O
TER
ATOM 1 O3' U B 661 34.590 115.885 28.728 1.00 47.78 O
ATOM 2 P A B 662 34.728 116.214 30.300 1.00 48.28 P
ATOM 3 OP1 A B 662 33.425 116.674 30.858 1.00 47.49 O
ATOM 4 OP2 A B 662 35.946 117.051 30.484 1.00 49.61 O
ATOM 5 O5' A B 662 35.059 114.802 30.940 1.00 46.98 O
ATOM 6 C5' A B 662 36.092 113.974 30.385 1.00 44.68 C
ATOM 7 C4' A B 662 36.904 113.358 31.490 1.00 43.38 C
ATOM 8 O4' A B 662 37.760 114.373 32.078 1.00 43.81 O
ATOM 9 C3' A B 662 36.091 112.766 32.642 1.00 43.50 C
ATOM 10 O3' A B 662 36.763 111.628 33.153 1.00 42.57 O
ATOM 11 C2' A B 662 36.127 113.878 33.679 1.00 41.97 C
ATOM 12 O2' A B 662 36.006 113.387 34.992 1.00 42.54 O
ATOM 13 C1' A B 662 37.535 114.420 33.468 1.00 43.62 C
ATOM 14 N9 A B 662 37.736 115.787 33.940 1.00 43.54 N
ATOM 15 C8 A B 662 37.079 116.942 33.599 1.00 41.67 C
ATOM 16 N7 A B 662 37.511 118.001 34.237 1.00 41.44 N
ATOM 17 C5 A B 662 38.522 117.509 35.050 1.00 43.32 C
ATOM 18 C6 A B 662 39.378 118.127 35.982 1.00 43.25 C
ATOM 19 N6 A B 662 39.350 119.427 36.263 1.00 42.61 N
ATOM 20 N1 A B 662 40.276 117.349 36.622 1.00 43.55 N
ATOM 21 C2 A B 662 40.306 116.039 36.338 1.00 44.20 C
ATOM 22 N3 A B 662 39.554 115.344 35.487 1.00 42.10 N
ATOM 23 C4 A B 662 38.673 116.149 34.871 1.00 42.84 C
ATOM 24 P U B 663 36.270 110.172 32.718 1.00 44.98 P
ATOM 25 OP1 U B 663 37.210 109.188 33.312 1.00 44.90 O
ATOM 26 OP2 U B 663 36.050 110.191 31.239 1.00 45.23 O
ATOM 27 O5' U B 663 34.849 110.029 33.413 1.00 42.45 O
TER
ATOM 2 P C A 26 47.228 119.837 42.210 1.00 37.58 P
ATOM 3 OP1 C A 26 48.183 118.701 42.300 1.00 37.52 O
ATOM 4 OP2 C A 26 47.723 121.179 41.820 1.00 37.56 O
ATOM 5 O5' C A 26 46.075 119.445 41.193 1.00 38.89 O
ATOM 6 C5' C A 26 45.348 118.220 41.352 1.00 38.90 C
ATOM 7 C4' C A 26 44.181 118.181 40.403 1.00 37.90 C
ATOM 8 O4' C A 26 43.297 119.298 40.684 1.00 37.62 O
ATOM 9 C3' C A 26 44.506 118.370 38.929 1.00 40.02 C
ATOM 10 O3' C A 26 45.000 117.200 38.308 1.00 41.28 O
ATOM 11 C2' C A 26 43.160 118.794 38.369 1.00 40.31 C
ATOM 12 O2' C A 26 42.260 117.707 38.269 1.00 40.68 O
ATOM 13 C1' C A 26 42.682 119.732 39.474 1.00 40.00 C
ATOM 14 N1 C A 26 43.066 121.132 39.216 1.00 40.55 N
ATOM 15 C2 C A 26 42.249 121.911 38.387 1.00 40.63 C
ATOM 16 O2 C A 26 41.266 121.383 37.839 1.00 39.03 O
ATOM 17 N3 C A 26 42.558 123.215 38.192 1.00 39.76 N
ATOM 18 C4 C A 26 43.643 123.740 38.769 1.00 40.09 C
ATOM 19 N4 C A 26 43.894 125.037 38.566 1.00 37.99 N
ATOM 20 C5 C A 26 44.515 122.961 39.585 1.00 40.09 C
ATOM 21 C6 C A 26 44.192 121.675 39.781 1.00 41.96 C
ATOM 22 P A A 27 46.011 117.340 37.063 1.00 43.85 P
ATOM 23 OP1 A A 27 46.521 115.982 36.755 1.00 44.62 O
ATOM 24 OP2 A A 27 46.976 118.441 37.310 1.00 44.58 O
ATOM 25 O5' A A 27 45.065 117.825 35.881 1.00 45.08 O
TER
ATOM 1 O3' U B 661 34.590 115.885 28.728 1.00 47.78 O
ATOM 2 P A B 662 34.728 116.214 30.300 1.00 48.28 P
ATOM 3 OP1 A B 662 33.425 116.674 30.858 1.00 47.49 O
ATOM 4 OP2 A B 662 35.946 117.051 30.484 1.00 49.61 O
ATOM 5 O5' A B 662 35.059 114.802 30.940 1.00 46.98 O
ATOM 6 C5' A B 662 36.092 113.974 30.385 1.00 44.68 C
ATOM 7 C4' A B 662 36.904 113.358 31.490 1.00 43.38 C
ATOM 8 O4' A B 662 37.760 114.373 32.078 1.00 43.81 O
ATOM 9 C3' A B 662 36.091 112.766 32.642 1.00 43.50 C
ATOM 10 O3' A B 662 36.763 111.628 33.153 1.00 42.57 O
ATOM 11 C2' A B 662 36.127 113.878 33.679 1.00 41.97 C
ATOM 12 O2' A B 662 36.006 113.387 34.992 1.00 42.54 O
ATOM 13 C1' A B 662 37.535 114.420 33.468 1.00 43.62 C
ATOM 14 N9 A B 662 37.736 115.787 33.940 1.00 43.54 N
ATOM 15 C8 A B 662 37.079 116.942 33.599 1.00 41.67 C
ATOM 16 N7 A B 662 37.511 118.001 34.237 1.00 41.44 N
ATOM 17 C5 A B 662 38.522 117.509 35.050 1.00 43.32 C
ATOM 18 C6 A B 662 39.378 118.127 35.982 1.00 43.25 C
ATOM 19 N6 A B 662 39.350 119.427 36.263 1.00 42.61 N
ATOM 20 N1 A B 662 40.276 117.349 36.622 1.00 43.55 N
ATOM 21 C2 A B 662 40.306 116.039 36.338 1.00 44.20 C
ATOM 22 N3 A B 662 39.554 115.344 35.487 1.00 42.10 N
ATOM 23 C4 A B 662 38.673 116.149 34.871 1.00 42.84 C
ATOM 24 P U B 663 36.270 110.172 32.718 1.00 44.98 P
ATOM 25 OP1 U B 663 37.210 109.188 33.312 1.00 44.90 O
ATOM 26 OP2 U B 663 36.050 110.191 31.239 1.00 45.23 O
ATOM 27 O5' U B 663 34.849 110.029 33.413 1.00 42.45 O
TER
Atoms:
C2: (42.249,121.911,38.387)
OP1: (48.183,118.701,42.300)
OP2: (47.723,121.179,41.820)
C4: (43.643,123.740,38.769)
O5': (46.075,119.445,41.193)
C3': (44.506,118.370,38.929)
C1': (42.682,119.732,39.474)
O4': (43.297,119.298,40.684)
C5': (45.348,118.220,41.352)
P: (47.228,119.837,42.210)
O2: (41.266,121.383,37.839)
C4': (44.181,118.181,40.403)
C2': (43.160,118.794,38.369)
O2': (42.260,117.707,38.269)
N1: (43.066,121.132,39.216)
N3: (42.558,123.215,38.192)
N4: (43.894,125.037,38.566)
C6: (44.192,121.675,39.781)
C5: (44.515,122.961,39.585)
O3': (45.000,117.200,38.308)
OP1: (48.183,118.701,42.300)
OP2: (47.723,121.179,41.820)
C4: (43.643,123.740,38.769)
O5': (46.075,119.445,41.193)
C3': (44.506,118.370,38.929)
C1': (42.682,119.732,39.474)
O4': (43.297,119.298,40.684)
C5': (45.348,118.220,41.352)
P: (47.228,119.837,42.210)
O2: (41.266,121.383,37.839)
C4': (44.181,118.181,40.403)
C2': (43.160,118.794,38.369)
O2': (42.260,117.707,38.269)
N1: (43.066,121.132,39.216)
N3: (42.558,123.215,38.192)
N4: (43.894,125.037,38.566)
C6: (44.192,121.675,39.781)
C5: (44.515,122.961,39.585)
O3': (45.000,117.200,38.308)
OP1: (33.425,116.674,30.858)
OP2: (35.946,117.051,30.484)
C3': (36.091,112.766,32.642)
C1': (37.535,114.420,33.468)
C5': (36.092,113.974,30.385)
O4': (37.760,114.373,32.078)
C8: (37.079,116.942,33.599)
O2': (36.006,113.387,34.992)
C6: (39.378,118.127,35.982)
C5: (38.522,117.509,35.050)
C4: (38.673,116.149,34.871)
P: (34.728,116.214,30.300)
C4': (36.904,113.358,31.490)
C2': (36.127,113.878,33.679)
C2: (40.306,116.039,36.338)
N1: (40.276,117.349,36.622)
N3: (39.554,115.344,35.487)
N6: (39.350,119.427,36.263)
N7: (37.511,118.001,34.237)
N9: (37.736,115.787,33.940)
O5': (35.059,114.802,30.940)
O3': (36.763,111.628,33.153)
OP2: (35.946,117.051,30.484)
C3': (36.091,112.766,32.642)
C1': (37.535,114.420,33.468)
C5': (36.092,113.974,30.385)
O4': (37.760,114.373,32.078)
C8: (37.079,116.942,33.599)
O2': (36.006,113.387,34.992)
C6: (39.378,118.127,35.982)
C5: (38.522,117.509,35.050)
C4: (38.673,116.149,34.871)
P: (34.728,116.214,30.300)
C4': (36.904,113.358,31.490)
C2': (36.127,113.878,33.679)
C2: (40.306,116.039,36.338)
N1: (40.276,117.349,36.622)
N3: (39.554,115.344,35.487)
N6: (39.350,119.427,36.263)
N7: (37.511,118.001,34.237)
N9: (37.736,115.787,33.940)
O5': (35.059,114.802,30.940)
O3': (36.763,111.628,33.153)
Image (generated by PyMOL):