Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A46:A50
Extra
PDB:
ATOM 1 O3' C A 45 44.511 6.988 6.005 1.00 17.99 O
ATOM 2 P C A 46 45.980 7.457 6.461 1.00 18.67 P
ATOM 3 OP1 C A 46 46.898 7.129 5.338 1.00 21.68 O
ATOM 4 OP2 C A 46 46.278 6.946 7.827 1.00 19.17 O
ATOM 5 O5' C A 46 45.884 9.044 6.591 1.00 19.72 O
ATOM 6 C5' C A 46 45.416 9.853 5.511 1.00 18.37 C
ATOM 7 C4' C A 46 45.011 11.220 6.023 1.00 18.28 C
ATOM 8 O4' C A 46 43.897 11.082 6.950 1.00 15.69 O
ATOM 9 C3' C A 46 46.067 11.959 6.829 1.00 18.50 C
ATOM 10 O3' C A 46 46.934 12.672 5.956 1.00 20.18 O
ATOM 11 C2' C A 46 45.214 12.933 7.635 1.00 17.27 C
ATOM 12 O2' C A 46 44.801 14.032 6.838 1.00 17.04 O
ATOM 13 C1' C A 46 43.998 12.066 7.963 1.00 15.86 C
ATOM 14 N1 C A 46 44.048 11.375 9.262 1.00 14.81 N
ATOM 15 C2 C A 46 43.596 12.046 10.397 1.00 13.83 C
ATOM 16 O2 C A 46 43.240 13.231 10.292 1.00 14.67 O
ATOM 17 N3 C A 46 43.557 11.390 11.584 1.00 14.27 N
ATOM 18 C4 C A 46 43.963 10.119 11.656 1.00 14.10 C
ATOM 19 N4 C A 46 43.870 9.496 12.839 1.00 14.85 N
ATOM 20 C5 C A 46 44.472 9.427 10.522 1.00 14.66 C
ATOM 21 C6 C A 46 44.497 10.086 9.355 1.00 15.48 C
ATOM 22 P G A 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 23 OP1 G A 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 24 OP2 G A 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 25 O5' G A 47 49.106 13.203 7.113 1.00 23.29 O
TER
ATOM 1 O3' A B 49 45.840 23.550 6.648 1.00 28.96 O
ATOM 2 P A B 50 44.474 24.360 6.886 1.00 29.12 P
ATOM 3 OP1 A B 50 44.568 25.617 6.094 1.00 30.02 O
ATOM 4 OP2 A B 50 44.207 24.431 8.347 1.00 29.33 O
ATOM 5 O5' A B 50 43.364 23.438 6.207 1.00 26.89 O
ATOM 6 C5' A B 50 43.352 23.263 4.798 1.00 22.50 C
ATOM 7 C4' A B 50 42.329 22.228 4.370 1.00 20.20 C
ATOM 8 O4' A B 50 42.611 20.941 5.013 1.00 19.87 O
ATOM 9 C3' A B 50 40.899 22.576 4.798 1.00 18.65 C
ATOM 10 O3' A B 50 40.028 21.865 3.922 1.00 19.24 O
ATOM 11 C2' A B 50 40.821 21.938 6.186 1.00 17.50 C
ATOM 12 O2' A B 50 39.511 21.653 6.640 1.00 15.77 O
ATOM 13 C1' A B 50 41.563 20.640 5.908 1.00 17.56 C
ATOM 14 N9 A B 50 42.031 19.827 7.030 1.00 15.36 N
ATOM 15 C8 A B 50 42.130 20.174 8.354 1.00 15.26 C
ATOM 16 N7 A B 50 42.472 19.175 9.137 1.00 14.26 N
ATOM 17 C5 A B 50 42.635 18.109 8.265 1.00 13.59 C
ATOM 18 C6 A B 50 42.976 16.766 8.475 1.00 14.47 C
ATOM 19 N6 A B 50 43.209 16.242 9.682 1.00 15.35 N
ATOM 20 N1 A B 50 43.063 15.963 7.394 1.00 15.39 N
ATOM 21 C2 A B 50 42.809 16.488 6.183 1.00 16.03 C
ATOM 22 N3 A B 50 42.468 17.733 5.862 1.00 15.00 N
ATOM 23 C4 A B 50 42.396 18.502 6.961 1.00 15.13 C
ATOM 24 P A B 51 38.752 22.586 3.269 1.00 19.29 P
ATOM 25 OP1 A B 51 39.126 23.009 1.884 1.00 21.44 O
ATOM 26 OP2 A B 51 38.213 23.585 4.221 1.00 20.25 O
ATOM 27 O5' A B 51 37.694 21.401 3.149 1.00 19.86 O
TER
ATOM 2 P C A 46 45.980 7.457 6.461 1.00 18.67 P
ATOM 3 OP1 C A 46 46.898 7.129 5.338 1.00 21.68 O
ATOM 4 OP2 C A 46 46.278 6.946 7.827 1.00 19.17 O
ATOM 5 O5' C A 46 45.884 9.044 6.591 1.00 19.72 O
ATOM 6 C5' C A 46 45.416 9.853 5.511 1.00 18.37 C
ATOM 7 C4' C A 46 45.011 11.220 6.023 1.00 18.28 C
ATOM 8 O4' C A 46 43.897 11.082 6.950 1.00 15.69 O
ATOM 9 C3' C A 46 46.067 11.959 6.829 1.00 18.50 C
ATOM 10 O3' C A 46 46.934 12.672 5.956 1.00 20.18 O
ATOM 11 C2' C A 46 45.214 12.933 7.635 1.00 17.27 C
ATOM 12 O2' C A 46 44.801 14.032 6.838 1.00 17.04 O
ATOM 13 C1' C A 46 43.998 12.066 7.963 1.00 15.86 C
ATOM 14 N1 C A 46 44.048 11.375 9.262 1.00 14.81 N
ATOM 15 C2 C A 46 43.596 12.046 10.397 1.00 13.83 C
ATOM 16 O2 C A 46 43.240 13.231 10.292 1.00 14.67 O
ATOM 17 N3 C A 46 43.557 11.390 11.584 1.00 14.27 N
ATOM 18 C4 C A 46 43.963 10.119 11.656 1.00 14.10 C
ATOM 19 N4 C A 46 43.870 9.496 12.839 1.00 14.85 N
ATOM 20 C5 C A 46 44.472 9.427 10.522 1.00 14.66 C
ATOM 21 C6 C A 46 44.497 10.086 9.355 1.00 15.48 C
ATOM 22 P G A 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 23 OP1 G A 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 24 OP2 G A 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 25 O5' G A 47 49.106 13.203 7.113 1.00 23.29 O
TER
ATOM 1 O3' A B 49 45.840 23.550 6.648 1.00 28.96 O
ATOM 2 P A B 50 44.474 24.360 6.886 1.00 29.12 P
ATOM 3 OP1 A B 50 44.568 25.617 6.094 1.00 30.02 O
ATOM 4 OP2 A B 50 44.207 24.431 8.347 1.00 29.33 O
ATOM 5 O5' A B 50 43.364 23.438 6.207 1.00 26.89 O
ATOM 6 C5' A B 50 43.352 23.263 4.798 1.00 22.50 C
ATOM 7 C4' A B 50 42.329 22.228 4.370 1.00 20.20 C
ATOM 8 O4' A B 50 42.611 20.941 5.013 1.00 19.87 O
ATOM 9 C3' A B 50 40.899 22.576 4.798 1.00 18.65 C
ATOM 10 O3' A B 50 40.028 21.865 3.922 1.00 19.24 O
ATOM 11 C2' A B 50 40.821 21.938 6.186 1.00 17.50 C
ATOM 12 O2' A B 50 39.511 21.653 6.640 1.00 15.77 O
ATOM 13 C1' A B 50 41.563 20.640 5.908 1.00 17.56 C
ATOM 14 N9 A B 50 42.031 19.827 7.030 1.00 15.36 N
ATOM 15 C8 A B 50 42.130 20.174 8.354 1.00 15.26 C
ATOM 16 N7 A B 50 42.472 19.175 9.137 1.00 14.26 N
ATOM 17 C5 A B 50 42.635 18.109 8.265 1.00 13.59 C
ATOM 18 C6 A B 50 42.976 16.766 8.475 1.00 14.47 C
ATOM 19 N6 A B 50 43.209 16.242 9.682 1.00 15.35 N
ATOM 20 N1 A B 50 43.063 15.963 7.394 1.00 15.39 N
ATOM 21 C2 A B 50 42.809 16.488 6.183 1.00 16.03 C
ATOM 22 N3 A B 50 42.468 17.733 5.862 1.00 15.00 N
ATOM 23 C4 A B 50 42.396 18.502 6.961 1.00 15.13 C
ATOM 24 P A B 51 38.752 22.586 3.269 1.00 19.29 P
ATOM 25 OP1 A B 51 39.126 23.009 1.884 1.00 21.44 O
ATOM 26 OP2 A B 51 38.213 23.585 4.221 1.00 20.25 O
ATOM 27 O5' A B 51 37.694 21.401 3.149 1.00 19.86 O
TER
Atoms:
C2: (43.596,12.046,10.397)
OP1: (46.898,7.129,5.338)
OP2: (46.278,6.946,7.827)
C4: (43.963,10.119,11.656)
O5': (45.884,9.044,6.591)
C3': (46.067,11.959,6.829)
C1': (43.998,12.066,7.963)
O4': (43.897,11.082,6.950)
C5': (45.416,9.853,5.511)
P: (45.980,7.457,6.461)
O2: (43.240,13.231,10.292)
C4': (45.011,11.220,6.023)
C2': (45.214,12.933,7.635)
O2': (44.801,14.032,6.838)
N1: (44.048,11.375,9.262)
N3: (43.557,11.390,11.584)
N4: (43.870,9.496,12.839)
C6: (44.497,10.086,9.355)
C5: (44.472,9.427,10.522)
O3': (46.934,12.672,5.956)
OP1: (46.898,7.129,5.338)
OP2: (46.278,6.946,7.827)
C4: (43.963,10.119,11.656)
O5': (45.884,9.044,6.591)
C3': (46.067,11.959,6.829)
C1': (43.998,12.066,7.963)
O4': (43.897,11.082,6.950)
C5': (45.416,9.853,5.511)
P: (45.980,7.457,6.461)
O2: (43.240,13.231,10.292)
C4': (45.011,11.220,6.023)
C2': (45.214,12.933,7.635)
O2': (44.801,14.032,6.838)
N1: (44.048,11.375,9.262)
N3: (43.557,11.390,11.584)
N4: (43.870,9.496,12.839)
C6: (44.497,10.086,9.355)
C5: (44.472,9.427,10.522)
O3': (46.934,12.672,5.956)
OP1: (44.568,25.617,6.094)
OP2: (44.207,24.431,8.347)
C3': (40.899,22.576,4.798)
C1': (41.563,20.640,5.908)
C5': (43.352,23.263,4.798)
O4': (42.611,20.941,5.013)
C8: (42.130,20.174,8.354)
O2': (39.511,21.653,6.640)
C6: (42.976,16.766,8.475)
C5: (42.635,18.109,8.265)
C4: (42.396,18.502,6.961)
P: (44.474,24.360,6.886)
C4': (42.329,22.228,4.370)
C2': (40.821,21.938,6.186)
C2: (42.809,16.488,6.183)
N1: (43.063,15.963,7.394)
N3: (42.468,17.733,5.862)
N6: (43.209,16.242,9.682)
N7: (42.472,19.175,9.137)
N9: (42.031,19.827,7.030)
O5': (43.364,23.438,6.207)
O3': (40.028,21.865,3.922)
OP2: (44.207,24.431,8.347)
C3': (40.899,22.576,4.798)
C1': (41.563,20.640,5.908)
C5': (43.352,23.263,4.798)
O4': (42.611,20.941,5.013)
C8: (42.130,20.174,8.354)
O2': (39.511,21.653,6.640)
C6: (42.976,16.766,8.475)
C5: (42.635,18.109,8.265)
C4: (42.396,18.502,6.961)
P: (44.474,24.360,6.886)
C4': (42.329,22.228,4.370)
C2': (40.821,21.938,6.186)
C2: (42.809,16.488,6.183)
N1: (43.063,15.963,7.394)
N3: (42.468,17.733,5.862)
N6: (43.209,16.242,9.682)
N7: (42.472,19.175,9.137)
N9: (42.031,19.827,7.030)
O5': (43.364,23.438,6.207)
O3': (40.028,21.865,3.922)
Image (generated by PyMOL):