Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1993:1947
Extra
PDB:
ATOM 1 O3' A A 992 19.756 -41.693 35.935 1.00 39.83 O
ATOM 2 P C A 993 18.781 -42.292 34.797 1.00 43.67 P
ATOM 3 OP1 C A 993 17.812 -41.247 34.458 1.00 43.65 O
ATOM 4 OP2 C A 993 18.264 -43.572 35.268 1.00 43.90 O
ATOM 5 O5' C A 993 19.768 -42.552 33.591 1.00 43.88 O
ATOM 6 C5' C A 993 19.607 -41.905 32.362 1.00 44.05 C
ATOM 7 C4' C A 993 19.216 -42.874 31.286 1.00 44.56 C
ATOM 8 O4' C A 993 18.667 -42.121 30.200 1.00 44.74 O
ATOM 9 C3' C A 993 20.328 -43.708 30.631 1.00 44.78 C
ATOM 10 O3' C A 993 20.648 -44.890 31.357 1.00 44.83 O
ATOM 11 C2' C A 993 19.733 -44.008 29.282 1.00 45.26 C
ATOM 12 O2' C A 993 18.774 -45.044 29.422 1.00 45.58 O
ATOM 13 C1' C A 993 18.986 -42.716 28.977 1.00 45.14 C
ATOM 14 N1 C A 993 19.773 -41.751 28.223 1.00 45.04 N
ATOM 15 C2 C A 993 19.882 -41.807 26.844 1.00 45.40 C
ATOM 16 O2 C A 993 19.362 -42.770 26.251 1.00 45.84 O
ATOM 17 N3 C A 993 20.607 -40.851 26.229 1.00 45.28 N
ATOM 18 C4 C A 993 21.162 -39.904 27.005 1.00 44.81 C
ATOM 19 N4 C A 993 21.887 -38.943 26.460 1.00 44.69 N
ATOM 20 C5 C A 993 21.022 -39.809 28.400 1.00 44.44 C
ATOM 21 C6 C A 993 20.305 -40.747 28.948 1.00 44.57 C
ATOM 22 P U A 994 21.945 -45.783 30.982 1.00 42.99 P
ATOM 23 OP1 U A 994 21.793 -47.089 31.695 1.00 43.15 O
ATOM 24 OP2 U A 994 23.168 -44.942 31.266 1.00 42.60 O
ATOM 25 O5' U A 994 21.813 -45.995 29.399 1.00 43.45 O
TER
ATOM 1 O3' A B 946 14.580 -49.466 18.854 1.00 62.15 O
ATOM 2 P A B 947 13.696 -49.247 20.203 1.00 57.05 P
ATOM 3 OP1 A B 947 12.426 -49.944 19.999 1.00 57.49 O
ATOM 4 OP2 A B 947 13.665 -47.798 20.462 1.00 56.60 O
ATOM 5 O5' A B 947 14.529 -49.986 21.358 1.00 56.75 O
ATOM 6 C5' A B 947 14.011 -51.124 22.015 1.00 56.93 C
ATOM 7 C4' A B 947 14.507 -51.248 23.435 1.00 56.45 C
ATOM 8 O4' A B 947 15.929 -50.950 23.512 1.00 56.15 O
ATOM 9 C3' A B 947 13.895 -50.298 24.450 1.00 55.99 C
ATOM 10 O3' A B 947 12.617 -50.684 24.862 1.00 56.16 O
ATOM 11 C2' A B 947 14.916 -50.316 25.580 1.00 55.52 C
ATOM 12 O2' A B 947 14.793 -51.504 26.340 1.00 55.64 O
ATOM 13 C1' A B 947 16.229 -50.376 24.797 1.00 55.58 C
ATOM 14 N9 A B 947 16.789 -49.029 24.609 1.00 55.20 N
ATOM 15 C8 A B 947 16.970 -48.420 23.414 1.00 55.37 C
ATOM 16 N7 A B 947 17.453 -47.207 23.480 1.00 54.99 N
ATOM 17 C5 A B 947 17.559 -47.006 24.822 1.00 54.53 C
ATOM 18 C6 A B 947 18.018 -45.876 25.479 1.00 54.01 C
ATOM 19 N6 A B 947 18.402 -44.823 24.752 1.00 53.92 N
ATOM 20 N1 A B 947 18.042 -45.895 26.828 1.00 53.63 N
ATOM 21 C2 A B 947 17.620 -47.027 27.415 1.00 53.80 C
ATOM 22 N3 A B 947 17.161 -48.164 26.880 1.00 54.29 N
ATOM 23 C4 A B 947 17.150 -48.096 25.545 1.00 54.65 C
ATOM 24 P U B 948 11.473 -49.586 25.033 1.00 57.30 P
ATOM 25 OP1 U B 948 10.225 -50.327 25.341 1.00 57.60 O
ATOM 26 OP2 U B 948 11.517 -48.701 23.814 1.00 57.42 O
ATOM 27 O5' U B 948 11.953 -48.771 26.326 1.00 56.64 O
TER
ATOM 2 P C A 993 18.781 -42.292 34.797 1.00 43.67 P
ATOM 3 OP1 C A 993 17.812 -41.247 34.458 1.00 43.65 O
ATOM 4 OP2 C A 993 18.264 -43.572 35.268 1.00 43.90 O
ATOM 5 O5' C A 993 19.768 -42.552 33.591 1.00 43.88 O
ATOM 6 C5' C A 993 19.607 -41.905 32.362 1.00 44.05 C
ATOM 7 C4' C A 993 19.216 -42.874 31.286 1.00 44.56 C
ATOM 8 O4' C A 993 18.667 -42.121 30.200 1.00 44.74 O
ATOM 9 C3' C A 993 20.328 -43.708 30.631 1.00 44.78 C
ATOM 10 O3' C A 993 20.648 -44.890 31.357 1.00 44.83 O
ATOM 11 C2' C A 993 19.733 -44.008 29.282 1.00 45.26 C
ATOM 12 O2' C A 993 18.774 -45.044 29.422 1.00 45.58 O
ATOM 13 C1' C A 993 18.986 -42.716 28.977 1.00 45.14 C
ATOM 14 N1 C A 993 19.773 -41.751 28.223 1.00 45.04 N
ATOM 15 C2 C A 993 19.882 -41.807 26.844 1.00 45.40 C
ATOM 16 O2 C A 993 19.362 -42.770 26.251 1.00 45.84 O
ATOM 17 N3 C A 993 20.607 -40.851 26.229 1.00 45.28 N
ATOM 18 C4 C A 993 21.162 -39.904 27.005 1.00 44.81 C
ATOM 19 N4 C A 993 21.887 -38.943 26.460 1.00 44.69 N
ATOM 20 C5 C A 993 21.022 -39.809 28.400 1.00 44.44 C
ATOM 21 C6 C A 993 20.305 -40.747 28.948 1.00 44.57 C
ATOM 22 P U A 994 21.945 -45.783 30.982 1.00 42.99 P
ATOM 23 OP1 U A 994 21.793 -47.089 31.695 1.00 43.15 O
ATOM 24 OP2 U A 994 23.168 -44.942 31.266 1.00 42.60 O
ATOM 25 O5' U A 994 21.813 -45.995 29.399 1.00 43.45 O
TER
ATOM 1 O3' A B 946 14.580 -49.466 18.854 1.00 62.15 O
ATOM 2 P A B 947 13.696 -49.247 20.203 1.00 57.05 P
ATOM 3 OP1 A B 947 12.426 -49.944 19.999 1.00 57.49 O
ATOM 4 OP2 A B 947 13.665 -47.798 20.462 1.00 56.60 O
ATOM 5 O5' A B 947 14.529 -49.986 21.358 1.00 56.75 O
ATOM 6 C5' A B 947 14.011 -51.124 22.015 1.00 56.93 C
ATOM 7 C4' A B 947 14.507 -51.248 23.435 1.00 56.45 C
ATOM 8 O4' A B 947 15.929 -50.950 23.512 1.00 56.15 O
ATOM 9 C3' A B 947 13.895 -50.298 24.450 1.00 55.99 C
ATOM 10 O3' A B 947 12.617 -50.684 24.862 1.00 56.16 O
ATOM 11 C2' A B 947 14.916 -50.316 25.580 1.00 55.52 C
ATOM 12 O2' A B 947 14.793 -51.504 26.340 1.00 55.64 O
ATOM 13 C1' A B 947 16.229 -50.376 24.797 1.00 55.58 C
ATOM 14 N9 A B 947 16.789 -49.029 24.609 1.00 55.20 N
ATOM 15 C8 A B 947 16.970 -48.420 23.414 1.00 55.37 C
ATOM 16 N7 A B 947 17.453 -47.207 23.480 1.00 54.99 N
ATOM 17 C5 A B 947 17.559 -47.006 24.822 1.00 54.53 C
ATOM 18 C6 A B 947 18.018 -45.876 25.479 1.00 54.01 C
ATOM 19 N6 A B 947 18.402 -44.823 24.752 1.00 53.92 N
ATOM 20 N1 A B 947 18.042 -45.895 26.828 1.00 53.63 N
ATOM 21 C2 A B 947 17.620 -47.027 27.415 1.00 53.80 C
ATOM 22 N3 A B 947 17.161 -48.164 26.880 1.00 54.29 N
ATOM 23 C4 A B 947 17.150 -48.096 25.545 1.00 54.65 C
ATOM 24 P U B 948 11.473 -49.586 25.033 1.00 57.30 P
ATOM 25 OP1 U B 948 10.225 -50.327 25.341 1.00 57.60 O
ATOM 26 OP2 U B 948 11.517 -48.701 23.814 1.00 57.42 O
ATOM 27 O5' U B 948 11.953 -48.771 26.326 1.00 56.64 O
TER
Atoms:
C2: (19.882,-41.807,26.844)
OP1: (17.812,-41.247,34.458)
OP2: (18.264,-43.572,35.268)
C4: (21.162,-39.904,27.005)
O5': (19.768,-42.552,33.591)
C3': (20.328,-43.708,30.631)
C1': (18.986,-42.716,28.977)
O4': (18.667,-42.121,30.200)
C5': (19.607,-41.905,32.362)
P: (18.781,-42.292,34.797)
O2: (19.362,-42.770,26.251)
C4': (19.216,-42.874,31.286)
C2': (19.733,-44.008,29.282)
O2': (18.774,-45.044,29.422)
N1: (19.773,-41.751,28.223)
N3: (20.607,-40.851,26.229)
N4: (21.887,-38.943,26.460)
C6: (20.305,-40.747,28.948)
C5: (21.022,-39.809,28.400)
O3': (20.648,-44.890,31.357)
OP1: (17.812,-41.247,34.458)
OP2: (18.264,-43.572,35.268)
C4: (21.162,-39.904,27.005)
O5': (19.768,-42.552,33.591)
C3': (20.328,-43.708,30.631)
C1': (18.986,-42.716,28.977)
O4': (18.667,-42.121,30.200)
C5': (19.607,-41.905,32.362)
P: (18.781,-42.292,34.797)
O2: (19.362,-42.770,26.251)
C4': (19.216,-42.874,31.286)
C2': (19.733,-44.008,29.282)
O2': (18.774,-45.044,29.422)
N1: (19.773,-41.751,28.223)
N3: (20.607,-40.851,26.229)
N4: (21.887,-38.943,26.460)
C6: (20.305,-40.747,28.948)
C5: (21.022,-39.809,28.400)
O3': (20.648,-44.890,31.357)
OP1: (12.426,-49.944,19.999)
OP2: (13.665,-47.798,20.462)
C3': (13.895,-50.298,24.450)
C1': (16.229,-50.376,24.797)
C5': (14.011,-51.124,22.015)
O4': (15.929,-50.950,23.512)
C8: (16.970,-48.420,23.414)
O2': (14.793,-51.504,26.340)
C6: (18.018,-45.876,25.479)
C5: (17.559,-47.006,24.822)
C4: (17.150,-48.096,25.545)
P: (13.696,-49.247,20.203)
C4': (14.507,-51.248,23.435)
C2': (14.916,-50.316,25.580)
C2: (17.620,-47.027,27.415)
N1: (18.042,-45.895,26.828)
N3: (17.161,-48.164,26.880)
N6: (18.402,-44.823,24.752)
N7: (17.453,-47.207,23.480)
N9: (16.789,-49.029,24.609)
O5': (14.529,-49.986,21.358)
O3': (12.617,-50.684,24.862)
OP2: (13.665,-47.798,20.462)
C3': (13.895,-50.298,24.450)
C1': (16.229,-50.376,24.797)
C5': (14.011,-51.124,22.015)
O4': (15.929,-50.950,23.512)
C8: (16.970,-48.420,23.414)
O2': (14.793,-51.504,26.340)
C6: (18.018,-45.876,25.479)
C5: (17.559,-47.006,24.822)
C4: (17.150,-48.096,25.545)
P: (13.696,-49.247,20.203)
C4': (14.507,-51.248,23.435)
C2': (14.916,-50.316,25.580)
C2: (17.620,-47.027,27.415)
N1: (18.042,-45.895,26.828)
N3: (17.161,-48.164,26.880)
N6: (18.402,-44.823,24.752)
N7: (17.453,-47.207,23.480)
N9: (16.789,-49.029,24.609)
O5': (14.529,-49.986,21.358)
O3': (12.617,-50.684,24.862)
Image (generated by PyMOL):