Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:328:350
Extra
PDB:
ATOM 1 O3' C A 27 6.124 -89.068 21.356 1.00 63.90 O
ATOM 2 P C A 28 5.121 -89.941 22.256 1.00 74.62 P
ATOM 3 OP1 C A 28 3.749 -89.403 22.017 1.00 74.84 O
ATOM 4 OP2 C A 28 5.668 -89.955 23.657 1.00 73.66 O
ATOM 5 O5' C A 28 5.235 -91.383 21.607 1.00 75.74 O
ATOM 6 C5' C A 28 4.346 -91.781 20.579 1.00 76.80 C
ATOM 7 C4' C A 28 4.559 -93.214 20.196 1.00 77.75 C
ATOM 8 O4' C A 28 5.959 -93.469 19.967 1.00 77.67 O
ATOM 9 C3' C A 28 4.158 -94.229 21.233 1.00 77.79 C
ATOM 10 O3' C A 28 2.774 -94.467 21.205 1.00 78.31 O
ATOM 11 C2' C A 28 4.970 -95.442 20.837 1.00 78.49 C
ATOM 12 O2' C A 28 4.332 -96.124 19.777 1.00 79.69 O
ATOM 13 C1' C A 28 6.253 -94.800 20.305 1.00 78.12 C
ATOM 14 N1 C A 28 7.349 -94.812 21.304 1.00 77.24 N
ATOM 15 C2 C A 28 8.178 -95.908 21.260 1.00 77.67 C
ATOM 16 O2 C A 28 7.943 -96.757 20.417 1.00 78.72 O
ATOM 17 N3 C A 28 9.229 -96.023 22.095 1.00 76.96 N
ATOM 18 C4 C A 28 9.484 -95.080 22.992 1.00 75.83 C
ATOM 19 N4 C A 28 10.528 -95.311 23.776 1.00 75.22 N
ATOM 20 C5 C A 28 8.660 -93.919 23.090 1.00 75.34 C
ATOM 21 C6 C A 28 7.617 -93.831 22.232 1.00 76.07 C
ATOM 22 P G A 29 1.998 -94.981 22.509 1.00 79.31 P
ATOM 23 OP1 G A 29 0.539 -94.879 22.196 1.00 79.85 O
ATOM 24 OP2 G A 29 2.533 -94.228 23.671 1.00 78.07 O
ATOM 25 O5' G A 29 2.431 -96.519 22.591 1.00 80.01 O
TER
ATOM 1 O3' U B 49 8.170-107.287 17.885 1.00 94.14 O
ATOM 2 P A B 50 7.971-106.473 16.498 1.00 88.28 P
ATOM 3 OP1 A B 50 8.578-107.305 15.415 1.00 89.38 O
ATOM 4 OP2 A B 50 8.487-105.102 16.710 1.00 87.16 O
ATOM 5 O5' A B 50 6.374-106.428 16.324 1.00 88.77 O
ATOM 6 C5' A B 50 5.499-106.772 17.394 1.00 88.52 C
ATOM 7 C4' A B 50 4.271-105.891 17.423 1.00 88.26 C
ATOM 8 O4' A B 50 4.158-105.226 18.706 1.00 87.06 O
ATOM 9 C3' A B 50 4.229-104.768 16.401 1.00 88.23 C
ATOM 10 O3' A B 50 3.753-105.219 15.149 1.00 89.44 O
ATOM 11 C2' A B 50 3.316-103.743 17.067 1.00 87.40 C
ATOM 12 O2' A B 50 1.954-104.086 16.914 1.00 88.08 O
ATOM 13 C1' A B 50 3.683-103.912 18.533 1.00 86.48 C
ATOM 14 N9 A B 50 4.749-102.980 18.924 1.00 85.38 N
ATOM 15 C8 A B 50 6.072-103.276 19.128 1.00 85.09 C
ATOM 16 N7 A B 50 6.794-102.220 19.443 1.00 84.07 N
ATOM 17 C5 A B 50 5.880-101.179 19.426 1.00 83.69 C
ATOM 18 C6 A B 50 6.028 -99.818 19.690 1.00 82.68 C
ATOM 19 N6 A B 50 7.191 -99.296 20.018 1.00 81.87 N
ATOM 20 N1 A B 50 4.953 -99.021 19.599 1.00 82.55 N
ATOM 21 C2 A B 50 3.797 -99.606 19.255 1.00 83.41 C
ATOM 22 N3 A B 50 3.516-100.878 18.996 1.00 84.40 N
ATOM 23 C4 A B 50 4.620-101.625 19.098 1.00 84.49 C
ATOM 24 P G B 51 4.124-104.469 13.779 1.00108.32 P
ATOM 25 OP1 G B 51 3.121-104.925 12.758 1.00109.54 O
ATOM 26 OP2 G B 51 5.574-104.697 13.517 1.00108.27 O
ATOM 27 O5' G B 51 3.882-102.954 14.125 1.00107.22 O
TER
ATOM 2 P C A 28 5.121 -89.941 22.256 1.00 74.62 P
ATOM 3 OP1 C A 28 3.749 -89.403 22.017 1.00 74.84 O
ATOM 4 OP2 C A 28 5.668 -89.955 23.657 1.00 73.66 O
ATOM 5 O5' C A 28 5.235 -91.383 21.607 1.00 75.74 O
ATOM 6 C5' C A 28 4.346 -91.781 20.579 1.00 76.80 C
ATOM 7 C4' C A 28 4.559 -93.214 20.196 1.00 77.75 C
ATOM 8 O4' C A 28 5.959 -93.469 19.967 1.00 77.67 O
ATOM 9 C3' C A 28 4.158 -94.229 21.233 1.00 77.79 C
ATOM 10 O3' C A 28 2.774 -94.467 21.205 1.00 78.31 O
ATOM 11 C2' C A 28 4.970 -95.442 20.837 1.00 78.49 C
ATOM 12 O2' C A 28 4.332 -96.124 19.777 1.00 79.69 O
ATOM 13 C1' C A 28 6.253 -94.800 20.305 1.00 78.12 C
ATOM 14 N1 C A 28 7.349 -94.812 21.304 1.00 77.24 N
ATOM 15 C2 C A 28 8.178 -95.908 21.260 1.00 77.67 C
ATOM 16 O2 C A 28 7.943 -96.757 20.417 1.00 78.72 O
ATOM 17 N3 C A 28 9.229 -96.023 22.095 1.00 76.96 N
ATOM 18 C4 C A 28 9.484 -95.080 22.992 1.00 75.83 C
ATOM 19 N4 C A 28 10.528 -95.311 23.776 1.00 75.22 N
ATOM 20 C5 C A 28 8.660 -93.919 23.090 1.00 75.34 C
ATOM 21 C6 C A 28 7.617 -93.831 22.232 1.00 76.07 C
ATOM 22 P G A 29 1.998 -94.981 22.509 1.00 79.31 P
ATOM 23 OP1 G A 29 0.539 -94.879 22.196 1.00 79.85 O
ATOM 24 OP2 G A 29 2.533 -94.228 23.671 1.00 78.07 O
ATOM 25 O5' G A 29 2.431 -96.519 22.591 1.00 80.01 O
TER
ATOM 1 O3' U B 49 8.170-107.287 17.885 1.00 94.14 O
ATOM 2 P A B 50 7.971-106.473 16.498 1.00 88.28 P
ATOM 3 OP1 A B 50 8.578-107.305 15.415 1.00 89.38 O
ATOM 4 OP2 A B 50 8.487-105.102 16.710 1.00 87.16 O
ATOM 5 O5' A B 50 6.374-106.428 16.324 1.00 88.77 O
ATOM 6 C5' A B 50 5.499-106.772 17.394 1.00 88.52 C
ATOM 7 C4' A B 50 4.271-105.891 17.423 1.00 88.26 C
ATOM 8 O4' A B 50 4.158-105.226 18.706 1.00 87.06 O
ATOM 9 C3' A B 50 4.229-104.768 16.401 1.00 88.23 C
ATOM 10 O3' A B 50 3.753-105.219 15.149 1.00 89.44 O
ATOM 11 C2' A B 50 3.316-103.743 17.067 1.00 87.40 C
ATOM 12 O2' A B 50 1.954-104.086 16.914 1.00 88.08 O
ATOM 13 C1' A B 50 3.683-103.912 18.533 1.00 86.48 C
ATOM 14 N9 A B 50 4.749-102.980 18.924 1.00 85.38 N
ATOM 15 C8 A B 50 6.072-103.276 19.128 1.00 85.09 C
ATOM 16 N7 A B 50 6.794-102.220 19.443 1.00 84.07 N
ATOM 17 C5 A B 50 5.880-101.179 19.426 1.00 83.69 C
ATOM 18 C6 A B 50 6.028 -99.818 19.690 1.00 82.68 C
ATOM 19 N6 A B 50 7.191 -99.296 20.018 1.00 81.87 N
ATOM 20 N1 A B 50 4.953 -99.021 19.599 1.00 82.55 N
ATOM 21 C2 A B 50 3.797 -99.606 19.255 1.00 83.41 C
ATOM 22 N3 A B 50 3.516-100.878 18.996 1.00 84.40 N
ATOM 23 C4 A B 50 4.620-101.625 19.098 1.00 84.49 C
ATOM 24 P G B 51 4.124-104.469 13.779 1.00108.32 P
ATOM 25 OP1 G B 51 3.121-104.925 12.758 1.00109.54 O
ATOM 26 OP2 G B 51 5.574-104.697 13.517 1.00108.27 O
ATOM 27 O5' G B 51 3.882-102.954 14.125 1.00107.22 O
TER
Atoms:
C2: (8.178,-95.908,21.260)
OP1: (3.749,-89.403,22.017)
OP2: (5.668,-89.955,23.657)
C4: (9.484,-95.080,22.992)
O5': (5.235,-91.383,21.607)
C3': (4.158,-94.229,21.233)
C1': (6.253,-94.800,20.305)
O4': (5.959,-93.469,19.967)
C5': (4.346,-91.781,20.579)
P: (5.121,-89.941,22.256)
O2: (7.943,-96.757,20.417)
C4': (4.559,-93.214,20.196)
C2': (4.970,-95.442,20.837)
O2': (4.332,-96.124,19.777)
N1: (7.349,-94.812,21.304)
N3: (9.229,-96.023,22.095)
N4: (10.528,-95.311,23.776)
C6: (7.617,-93.831,22.232)
C5: (8.660,-93.919,23.090)
O3': (2.774,-94.467,21.205)
OP1: (3.749,-89.403,22.017)
OP2: (5.668,-89.955,23.657)
C4: (9.484,-95.080,22.992)
O5': (5.235,-91.383,21.607)
C3': (4.158,-94.229,21.233)
C1': (6.253,-94.800,20.305)
O4': (5.959,-93.469,19.967)
C5': (4.346,-91.781,20.579)
P: (5.121,-89.941,22.256)
O2: (7.943,-96.757,20.417)
C4': (4.559,-93.214,20.196)
C2': (4.970,-95.442,20.837)
O2': (4.332,-96.124,19.777)
N1: (7.349,-94.812,21.304)
N3: (9.229,-96.023,22.095)
N4: (10.528,-95.311,23.776)
C6: (7.617,-93.831,22.232)
C5: (8.660,-93.919,23.090)
O3': (2.774,-94.467,21.205)
OP1: (8.578,-107.305,15.415)
OP2: (8.487,-105.102,16.710)
C3': (4.229,-104.768,16.401)
C1': (3.683,-103.912,18.533)
C5': (5.499,-106.772,17.394)
O4': (4.158,-105.226,18.706)
C8: (6.072,-103.276,19.128)
O2': (1.954,-104.086,16.914)
C6: (6.028,-99.818,19.690)
C5: (5.880,-101.179,19.426)
C4: (4.620,-101.625,19.098)
P: (7.971,-106.473,16.498)
C4': (4.271,-105.891,17.423)
C2': (3.316,-103.743,17.067)
C2: (3.797,-99.606,19.255)
N1: (4.953,-99.021,19.599)
N3: (3.516,-100.878,18.996)
N6: (7.191,-99.296,20.018)
N7: (6.794,-102.220,19.443)
N9: (4.749,-102.980,18.924)
O5': (6.374,-106.428,16.324)
O3': (3.753,-105.219,15.149)
OP2: (8.487,-105.102,16.710)
C3': (4.229,-104.768,16.401)
C1': (3.683,-103.912,18.533)
C5': (5.499,-106.772,17.394)
O4': (4.158,-105.226,18.706)
C8: (6.072,-103.276,19.128)
O2': (1.954,-104.086,16.914)
C6: (6.028,-99.818,19.690)
C5: (5.880,-101.179,19.426)
C4: (4.620,-101.625,19.098)
P: (7.971,-106.473,16.498)
C4': (4.271,-105.891,17.423)
C2': (3.316,-103.743,17.067)
C2: (3.797,-99.606,19.255)
N1: (4.953,-99.021,19.599)
N3: (3.516,-100.878,18.996)
N6: (7.191,-99.296,20.018)
N7: (6.794,-102.220,19.443)
N9: (4.749,-102.980,18.924)
O5': (6.374,-106.428,16.324)
O3': (3.753,-105.219,15.149)
Image (generated by PyMOL):