Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02129:02372
Extra
PDB:
ATOM 1 O3' U A2128 69.734 94.634 95.620 1.00 41.87 O
ATOM 2 P G A2129 69.017 93.990 96.897 1.00 43.08 P
ATOM 3 OP1 G A2129 70.061 93.837 97.940 1.00 44.43 O
ATOM 4 OP2 G A2129 68.216 92.815 96.473 1.00 43.48 O
ATOM 5 O5' G A2129 68.007 95.115 97.375 1.00 41.55 O
ATOM 6 C5' G A2129 68.470 96.198 98.171 1.00 39.96 C
ATOM 7 C4' G A2129 67.423 97.273 98.244 1.00 39.40 C
ATOM 8 O4' G A2129 66.179 96.716 98.756 1.00 39.81 O
ATOM 9 C3' G A2129 67.804 98.401 99.187 1.00 38.73 C
ATOM 10 O3' G A2129 67.265 99.625 98.714 1.00 36.87 O
ATOM 11 C2' G A2129 67.132 97.983 100.486 1.00 39.44 C
ATOM 12 O2' G A2129 66.878 99.087 101.322 1.00 40.87 O
ATOM 13 C1' G A2129 65.835 97.369 99.963 1.00 40.86 C
ATOM 14 N9 G A2129 65.223 96.408 100.883 1.00 42.30 N
ATOM 15 C8 G A2129 64.283 96.698 101.845 1.00 42.16 C
ATOM 16 N7 G A2129 63.933 95.659 102.551 1.00 42.32 N
ATOM 17 C5 G A2129 64.679 94.615 102.024 1.00 41.46 C
ATOM 18 C6 G A2129 64.728 93.255 102.397 1.00 41.93 C
ATOM 19 O6 G A2129 64.106 92.685 103.299 1.00 44.70 O
ATOM 20 N1 G A2129 65.615 92.535 101.602 1.00 40.52 N
ATOM 21 C2 G A2129 66.359 93.059 100.581 1.00 40.37 C
ATOM 22 N2 G A2129 67.140 92.197 99.921 1.00 38.56 N
ATOM 23 N3 G A2129 66.333 94.336 100.228 1.00 41.53 N
ATOM 24 C4 G A2129 65.474 95.052 100.987 1.00 41.52 C
ATOM 25 P G A2130 68.245 100.858 98.410 1.00 34.32 P
ATOM 26 OP1 G A2130 69.590 100.558 98.979 1.00 36.77 O
ATOM 27 OP2 G A2130 67.536 102.093 98.828 1.00 33.19 O
ATOM 28 O5' G A2130 68.380 100.853 96.825 1.00 32.99 O
TER
ATOM 1 O3' C B2371 67.464 99.551 105.989 1.00 33.33 O
ATOM 2 P U B2372 67.116 99.957 104.479 1.00 34.72 P
ATOM 3 OP1 U B2372 67.368 98.742 103.666 1.00 36.02 O
ATOM 4 OP2 U B2372 67.805 101.221 104.136 1.00 35.03 O
ATOM 5 O5' U B2372 65.548 100.236 104.508 1.00 36.74 O
ATOM 6 C5' U B2372 64.608 99.190 104.824 1.00 35.55 C
ATOM 7 C4' U B2372 63.209 99.749 104.883 1.00 35.38 C
ATOM 8 O4' U B2372 63.155 100.786 105.890 1.00 36.26 O
ATOM 9 C3' U B2372 62.755 100.475 103.629 1.00 35.99 C
ATOM 10 O3' U B2372 62.282 99.539 102.671 1.00 36.54 O
ATOM 11 C2' U B2372 61.629 101.363 104.147 1.00 35.91 C
ATOM 12 O2' U B2372 60.399 100.676 104.260 1.00 36.63 O
ATOM 13 C1' U B2372 62.129 101.707 105.554 1.00 36.36 C
ATOM 14 N1 U B2372 62.606 103.085 105.772 1.00 34.72 N
ATOM 15 C2 U B2372 61.656 104.052 106.054 1.00 34.88 C
ATOM 16 O2 U B2372 60.459 103.820 106.088 1.00 35.79 O
ATOM 17 N3 U B2372 62.156 105.306 106.289 1.00 34.74 N
ATOM 18 C4 U B2372 63.473 105.694 106.267 1.00 34.23 C
ATOM 19 O4 U B2372 63.766 106.860 106.546 1.00 32.50 O
ATOM 20 C5 U B2372 64.394 104.647 105.947 1.00 34.75 C
ATOM 21 C6 U B2372 63.940 103.410 105.715 1.00 34.66 C
ATOM 22 P A B2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 23 OP1 A B2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 24 OP2 A B2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 25 O5' A B2373 61.587 100.872 100.651 1.00 36.66 O
TER
ATOM 2 P G A2129 69.017 93.990 96.897 1.00 43.08 P
ATOM 3 OP1 G A2129 70.061 93.837 97.940 1.00 44.43 O
ATOM 4 OP2 G A2129 68.216 92.815 96.473 1.00 43.48 O
ATOM 5 O5' G A2129 68.007 95.115 97.375 1.00 41.55 O
ATOM 6 C5' G A2129 68.470 96.198 98.171 1.00 39.96 C
ATOM 7 C4' G A2129 67.423 97.273 98.244 1.00 39.40 C
ATOM 8 O4' G A2129 66.179 96.716 98.756 1.00 39.81 O
ATOM 9 C3' G A2129 67.804 98.401 99.187 1.00 38.73 C
ATOM 10 O3' G A2129 67.265 99.625 98.714 1.00 36.87 O
ATOM 11 C2' G A2129 67.132 97.983 100.486 1.00 39.44 C
ATOM 12 O2' G A2129 66.878 99.087 101.322 1.00 40.87 O
ATOM 13 C1' G A2129 65.835 97.369 99.963 1.00 40.86 C
ATOM 14 N9 G A2129 65.223 96.408 100.883 1.00 42.30 N
ATOM 15 C8 G A2129 64.283 96.698 101.845 1.00 42.16 C
ATOM 16 N7 G A2129 63.933 95.659 102.551 1.00 42.32 N
ATOM 17 C5 G A2129 64.679 94.615 102.024 1.00 41.46 C
ATOM 18 C6 G A2129 64.728 93.255 102.397 1.00 41.93 C
ATOM 19 O6 G A2129 64.106 92.685 103.299 1.00 44.70 O
ATOM 20 N1 G A2129 65.615 92.535 101.602 1.00 40.52 N
ATOM 21 C2 G A2129 66.359 93.059 100.581 1.00 40.37 C
ATOM 22 N2 G A2129 67.140 92.197 99.921 1.00 38.56 N
ATOM 23 N3 G A2129 66.333 94.336 100.228 1.00 41.53 N
ATOM 24 C4 G A2129 65.474 95.052 100.987 1.00 41.52 C
ATOM 25 P G A2130 68.245 100.858 98.410 1.00 34.32 P
ATOM 26 OP1 G A2130 69.590 100.558 98.979 1.00 36.77 O
ATOM 27 OP2 G A2130 67.536 102.093 98.828 1.00 33.19 O
ATOM 28 O5' G A2130 68.380 100.853 96.825 1.00 32.99 O
TER
ATOM 1 O3' C B2371 67.464 99.551 105.989 1.00 33.33 O
ATOM 2 P U B2372 67.116 99.957 104.479 1.00 34.72 P
ATOM 3 OP1 U B2372 67.368 98.742 103.666 1.00 36.02 O
ATOM 4 OP2 U B2372 67.805 101.221 104.136 1.00 35.03 O
ATOM 5 O5' U B2372 65.548 100.236 104.508 1.00 36.74 O
ATOM 6 C5' U B2372 64.608 99.190 104.824 1.00 35.55 C
ATOM 7 C4' U B2372 63.209 99.749 104.883 1.00 35.38 C
ATOM 8 O4' U B2372 63.155 100.786 105.890 1.00 36.26 O
ATOM 9 C3' U B2372 62.755 100.475 103.629 1.00 35.99 C
ATOM 10 O3' U B2372 62.282 99.539 102.671 1.00 36.54 O
ATOM 11 C2' U B2372 61.629 101.363 104.147 1.00 35.91 C
ATOM 12 O2' U B2372 60.399 100.676 104.260 1.00 36.63 O
ATOM 13 C1' U B2372 62.129 101.707 105.554 1.00 36.36 C
ATOM 14 N1 U B2372 62.606 103.085 105.772 1.00 34.72 N
ATOM 15 C2 U B2372 61.656 104.052 106.054 1.00 34.88 C
ATOM 16 O2 U B2372 60.459 103.820 106.088 1.00 35.79 O
ATOM 17 N3 U B2372 62.156 105.306 106.289 1.00 34.74 N
ATOM 18 C4 U B2372 63.473 105.694 106.267 1.00 34.23 C
ATOM 19 O4 U B2372 63.766 106.860 106.546 1.00 32.50 O
ATOM 20 C5 U B2372 64.394 104.647 105.947 1.00 34.75 C
ATOM 21 C6 U B2372 63.940 103.410 105.715 1.00 34.66 C
ATOM 22 P A B2373 62.612 99.751 101.115 1.00 37.75 P
ATOM 23 OP1 A B2373 62.245 98.488 100.424 1.00 37.73 O
ATOM 24 OP2 A B2373 63.986 100.304 100.966 1.00 35.64 O
ATOM 25 O5' A B2373 61.587 100.872 100.651 1.00 36.66 O
TER
Atoms:
OP1: (70.061,93.837,97.940)
OP2: (68.216,92.815,96.473)
C3': (67.804,98.401,99.187)
C1': (65.835,97.369,99.963)
C5': (68.470,96.198,98.171)
O6: (64.106,92.685,103.299)
O4': (66.179,96.716,98.756)
C8: (64.283,96.698,101.845)
C2: (66.359,93.059,100.581)
C6: (64.728,93.255,102.397)
C5: (64.679,94.615,102.024)
C4: (65.474,95.052,100.987)
P: (69.017,93.990,96.897)
C4': (67.423,97.273,98.244)
C2': (67.132,97.983,100.486)
O2': (66.878,99.087,101.322)
N1: (65.615,92.535,101.602)
N2: (67.140,92.197,99.921)
N3: (66.333,94.336,100.228)
N7: (63.933,95.659,102.551)
N9: (65.223,96.408,100.883)
O5': (68.007,95.115,97.375)
O3': (67.265,99.625,98.714)
OP2: (68.216,92.815,96.473)
C3': (67.804,98.401,99.187)
C1': (65.835,97.369,99.963)
C5': (68.470,96.198,98.171)
O6: (64.106,92.685,103.299)
O4': (66.179,96.716,98.756)
C8: (64.283,96.698,101.845)
C2: (66.359,93.059,100.581)
C6: (64.728,93.255,102.397)
C5: (64.679,94.615,102.024)
C4: (65.474,95.052,100.987)
P: (69.017,93.990,96.897)
C4': (67.423,97.273,98.244)
C2': (67.132,97.983,100.486)
O2': (66.878,99.087,101.322)
N1: (65.615,92.535,101.602)
N2: (67.140,92.197,99.921)
N3: (66.333,94.336,100.228)
N7: (63.933,95.659,102.551)
N9: (65.223,96.408,100.883)
O5': (68.007,95.115,97.375)
O3': (67.265,99.625,98.714)
C4: (63.473,105.694,106.267)
N3: (62.156,105.306,106.289)
OP1: (67.368,98.742,103.666)
OP2: (67.805,101.221,104.136)
C2: (61.656,104.052,106.054)
C1': (62.129,101.707,105.554)
C3': (62.755,100.475,103.629)
O5': (65.548,100.236,104.508)
O4': (63.155,100.786,105.890)
C5': (64.608,99.190,104.824)
P: (67.116,99.957,104.479)
C4': (63.209,99.749,104.883)
C2': (61.629,101.363,104.147)
O2': (60.399,100.676,104.260)
N1: (62.606,103.085,105.772)
O4: (63.766,106.860,106.546)
O2: (60.459,103.820,106.088)
C6: (63.940,103.410,105.715)
C5: (64.394,104.647,105.947)
O3': (62.282,99.539,102.671)
N3: (62.156,105.306,106.289)
OP1: (67.368,98.742,103.666)
OP2: (67.805,101.221,104.136)
C2: (61.656,104.052,106.054)
C1': (62.129,101.707,105.554)
C3': (62.755,100.475,103.629)
O5': (65.548,100.236,104.508)
O4': (63.155,100.786,105.890)
C5': (64.608,99.190,104.824)
P: (67.116,99.957,104.479)
C4': (63.209,99.749,104.883)
C2': (61.629,101.363,104.147)
O2': (60.399,100.676,104.260)
N1: (62.606,103.085,105.772)
O4: (63.766,106.860,106.546)
O2: (60.459,103.820,106.088)
C6: (63.940,103.410,105.715)
C5: (64.394,104.647,105.947)
O3': (62.282,99.539,102.671)
Image (generated by PyMOL):