Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3LA5:A48:A52
Extra
PDB:
ATOM 1 O3' C A 47 -10.755 35.988 6.154 1.00 20.63 O
ATOM 2 P C A 48 -12.044 36.718 6.745 1.00 24.18 P
ATOM 3 OP1 C A 48 -12.588 37.572 5.663 1.00 30.48 O
ATOM 4 OP2 C A 48 -11.681 37.299 8.059 1.00 22.75 O
ATOM 5 O5' C A 48 -13.067 35.517 6.990 1.00 19.32 O
ATOM 6 C5' C A 48 -13.475 34.684 5.923 1.00 18.94 C
ATOM 7 C4' C A 48 -14.137 33.437 6.481 1.00 20.18 C
ATOM 8 O4' C A 48 -13.185 32.668 7.254 1.00 17.82 O
ATOM 9 C3' C A 48 -15.269 33.700 7.459 1.00 18.48 C
ATOM 10 O3' C A 48 -16.421 33.913 6.701 1.00 22.53 O
ATOM 11 C2' C A 48 -15.348 32.352 8.161 1.00 15.78 C
ATOM 12 O2' C A 48 -15.920 31.369 7.319 1.00 17.05 O
ATOM 13 C1' C A 48 -13.872 32.032 8.317 1.00 16.77 C
ATOM 14 N1 C A 48 -13.208 32.443 9.576 1.00 14.49 N
ATOM 15 C2 C A 48 -13.301 31.588 10.681 1.00 13.10 C
ATOM 16 O2 C A 48 -13.973 30.561 10.572 1.00 13.54 O
ATOM 17 N3 C A 48 -12.672 31.919 11.828 1.00 13.69 N
ATOM 18 C4 C A 48 -11.974 33.058 11.889 1.00 14.97 C
ATOM 19 N4 C A 48 -11.361 33.361 13.037 1.00 13.10 N
ATOM 20 C5 C A 48 -11.865 33.948 10.771 1.00 16.09 C
ATOM 21 C6 C A 48 -12.486 33.601 9.637 1.00 15.16 C
ATOM 22 P U A 49 -17.346 35.191 6.944 1.00 29.93 P
ATOM 23 OP1 U A 49 -18.316 35.197 5.823 1.00 31.53 O
ATOM 24 OP2 U A 49 -16.485 36.351 7.253 1.00 24.50 O
ATOM 25 O5' U A 49 -18.137 34.787 8.263 1.00 29.39 O
TER
ATOM 1 O3' A B 51 -23.481 25.729 7.408 1.00 31.02 O
ATOM 2 P A B 52 -23.408 24.163 7.716 1.00 30.32 P
ATOM 3 OP1 A B 52 -24.542 23.501 7.031 1.00 35.25 O
ATOM 4 OP2 A B 52 -23.188 23.964 9.166 1.00 30.39 O
ATOM 5 O5' A B 52 -22.056 23.770 6.956 1.00 25.20 O
ATOM 6 C5' A B 52 -21.951 24.027 5.561 1.00 28.55 C
ATOM 7 C4' A B 52 -20.506 24.001 5.101 1.00 25.44 C
ATOM 8 O4' A B 52 -19.786 25.077 5.762 1.00 23.44 O
ATOM 9 C3' A B 52 -19.729 22.722 5.409 1.00 25.40 C
ATOM 10 O3' A B 52 -18.756 22.521 4.392 1.00 27.26 O
ATOM 11 C2' A B 52 -19.050 23.096 6.720 1.00 22.99 C
ATOM 12 O2' A B 52 -17.909 22.311 7.008 1.00 23.50 O
ATOM 13 C1' A B 52 -18.634 24.509 6.345 1.00 21.62 C
ATOM 14 N9 A B 52 -18.162 25.298 7.477 1.00 16.26 N
ATOM 15 C8 A B 52 -18.270 24.979 8.800 1.00 18.66 C
ATOM 16 N7 A B 52 -17.723 25.874 9.588 1.00 16.12 N
ATOM 17 C5 A B 52 -17.220 26.831 8.720 1.00 14.89 C
ATOM 18 C6 A B 52 -16.529 28.030 8.940 1.00 15.38 C
ATOM 19 N6 A B 52 -16.208 28.462 10.164 1.00 15.19 N
ATOM 20 N1 A B 52 -16.170 28.758 7.858 1.00 17.45 N
ATOM 21 C2 A B 52 -16.488 28.293 6.641 1.00 17.69 C
ATOM 22 N3 A B 52 -17.134 27.170 6.311 1.00 19.28 N
ATOM 23 C4 A B 52 -17.478 26.484 7.410 1.00 18.17 C
ATOM 24 P A B 53 -18.456 21.068 3.790 1.00 27.01 P
ATOM 25 OP1 A B 53 -19.330 20.907 2.603 1.00 35.60 O
ATOM 26 OP2 A B 53 -18.492 20.052 4.867 1.00 24.36 O
ATOM 27 O5' A B 53 -16.950 21.237 3.284 1.00 25.35 O
TER
ATOM 2 P C A 48 -12.044 36.718 6.745 1.00 24.18 P
ATOM 3 OP1 C A 48 -12.588 37.572 5.663 1.00 30.48 O
ATOM 4 OP2 C A 48 -11.681 37.299 8.059 1.00 22.75 O
ATOM 5 O5' C A 48 -13.067 35.517 6.990 1.00 19.32 O
ATOM 6 C5' C A 48 -13.475 34.684 5.923 1.00 18.94 C
ATOM 7 C4' C A 48 -14.137 33.437 6.481 1.00 20.18 C
ATOM 8 O4' C A 48 -13.185 32.668 7.254 1.00 17.82 O
ATOM 9 C3' C A 48 -15.269 33.700 7.459 1.00 18.48 C
ATOM 10 O3' C A 48 -16.421 33.913 6.701 1.00 22.53 O
ATOM 11 C2' C A 48 -15.348 32.352 8.161 1.00 15.78 C
ATOM 12 O2' C A 48 -15.920 31.369 7.319 1.00 17.05 O
ATOM 13 C1' C A 48 -13.872 32.032 8.317 1.00 16.77 C
ATOM 14 N1 C A 48 -13.208 32.443 9.576 1.00 14.49 N
ATOM 15 C2 C A 48 -13.301 31.588 10.681 1.00 13.10 C
ATOM 16 O2 C A 48 -13.973 30.561 10.572 1.00 13.54 O
ATOM 17 N3 C A 48 -12.672 31.919 11.828 1.00 13.69 N
ATOM 18 C4 C A 48 -11.974 33.058 11.889 1.00 14.97 C
ATOM 19 N4 C A 48 -11.361 33.361 13.037 1.00 13.10 N
ATOM 20 C5 C A 48 -11.865 33.948 10.771 1.00 16.09 C
ATOM 21 C6 C A 48 -12.486 33.601 9.637 1.00 15.16 C
ATOM 22 P U A 49 -17.346 35.191 6.944 1.00 29.93 P
ATOM 23 OP1 U A 49 -18.316 35.197 5.823 1.00 31.53 O
ATOM 24 OP2 U A 49 -16.485 36.351 7.253 1.00 24.50 O
ATOM 25 O5' U A 49 -18.137 34.787 8.263 1.00 29.39 O
TER
ATOM 1 O3' A B 51 -23.481 25.729 7.408 1.00 31.02 O
ATOM 2 P A B 52 -23.408 24.163 7.716 1.00 30.32 P
ATOM 3 OP1 A B 52 -24.542 23.501 7.031 1.00 35.25 O
ATOM 4 OP2 A B 52 -23.188 23.964 9.166 1.00 30.39 O
ATOM 5 O5' A B 52 -22.056 23.770 6.956 1.00 25.20 O
ATOM 6 C5' A B 52 -21.951 24.027 5.561 1.00 28.55 C
ATOM 7 C4' A B 52 -20.506 24.001 5.101 1.00 25.44 C
ATOM 8 O4' A B 52 -19.786 25.077 5.762 1.00 23.44 O
ATOM 9 C3' A B 52 -19.729 22.722 5.409 1.00 25.40 C
ATOM 10 O3' A B 52 -18.756 22.521 4.392 1.00 27.26 O
ATOM 11 C2' A B 52 -19.050 23.096 6.720 1.00 22.99 C
ATOM 12 O2' A B 52 -17.909 22.311 7.008 1.00 23.50 O
ATOM 13 C1' A B 52 -18.634 24.509 6.345 1.00 21.62 C
ATOM 14 N9 A B 52 -18.162 25.298 7.477 1.00 16.26 N
ATOM 15 C8 A B 52 -18.270 24.979 8.800 1.00 18.66 C
ATOM 16 N7 A B 52 -17.723 25.874 9.588 1.00 16.12 N
ATOM 17 C5 A B 52 -17.220 26.831 8.720 1.00 14.89 C
ATOM 18 C6 A B 52 -16.529 28.030 8.940 1.00 15.38 C
ATOM 19 N6 A B 52 -16.208 28.462 10.164 1.00 15.19 N
ATOM 20 N1 A B 52 -16.170 28.758 7.858 1.00 17.45 N
ATOM 21 C2 A B 52 -16.488 28.293 6.641 1.00 17.69 C
ATOM 22 N3 A B 52 -17.134 27.170 6.311 1.00 19.28 N
ATOM 23 C4 A B 52 -17.478 26.484 7.410 1.00 18.17 C
ATOM 24 P A B 53 -18.456 21.068 3.790 1.00 27.01 P
ATOM 25 OP1 A B 53 -19.330 20.907 2.603 1.00 35.60 O
ATOM 26 OP2 A B 53 -18.492 20.052 4.867 1.00 24.36 O
ATOM 27 O5' A B 53 -16.950 21.237 3.284 1.00 25.35 O
TER
Atoms:
C2: (-13.301,31.588,10.681)
OP1: (-12.588,37.572,5.663)
OP2: (-11.681,37.299,8.059)
C4: (-11.974,33.058,11.889)
O5': (-13.067,35.517,6.990)
C3': (-15.269,33.700,7.459)
C1': (-13.872,32.032,8.317)
O4': (-13.185,32.668,7.254)
C5': (-13.475,34.684,5.923)
P: (-12.044,36.718,6.745)
O2: (-13.973,30.561,10.572)
C4': (-14.137,33.437,6.481)
C2': (-15.348,32.352,8.161)
O2': (-15.920,31.369,7.319)
N1: (-13.208,32.443,9.576)
N3: (-12.672,31.919,11.828)
N4: (-11.361,33.361,13.037)
C6: (-12.486,33.601,9.637)
C5: (-11.865,33.948,10.771)
O3': (-16.421,33.913,6.701)
OP1: (-12.588,37.572,5.663)
OP2: (-11.681,37.299,8.059)
C4: (-11.974,33.058,11.889)
O5': (-13.067,35.517,6.990)
C3': (-15.269,33.700,7.459)
C1': (-13.872,32.032,8.317)
O4': (-13.185,32.668,7.254)
C5': (-13.475,34.684,5.923)
P: (-12.044,36.718,6.745)
O2: (-13.973,30.561,10.572)
C4': (-14.137,33.437,6.481)
C2': (-15.348,32.352,8.161)
O2': (-15.920,31.369,7.319)
N1: (-13.208,32.443,9.576)
N3: (-12.672,31.919,11.828)
N4: (-11.361,33.361,13.037)
C6: (-12.486,33.601,9.637)
C5: (-11.865,33.948,10.771)
O3': (-16.421,33.913,6.701)
OP1: (-24.542,23.501,7.031)
OP2: (-23.188,23.964,9.166)
C3': (-19.729,22.722,5.409)
C1': (-18.634,24.509,6.345)
C5': (-21.951,24.027,5.561)
O4': (-19.786,25.077,5.762)
C8: (-18.270,24.979,8.800)
O2': (-17.909,22.311,7.008)
C6: (-16.529,28.030,8.940)
C5: (-17.220,26.831,8.720)
C4: (-17.478,26.484,7.410)
P: (-23.408,24.163,7.716)
C4': (-20.506,24.001,5.101)
C2': (-19.050,23.096,6.720)
C2: (-16.488,28.293,6.641)
N1: (-16.170,28.758,7.858)
N3: (-17.134,27.170,6.311)
N6: (-16.208,28.462,10.164)
N7: (-17.723,25.874,9.588)
N9: (-18.162,25.298,7.477)
O5': (-22.056,23.770,6.956)
O3': (-18.756,22.521,4.392)
OP2: (-23.188,23.964,9.166)
C3': (-19.729,22.722,5.409)
C1': (-18.634,24.509,6.345)
C5': (-21.951,24.027,5.561)
O4': (-19.786,25.077,5.762)
C8: (-18.270,24.979,8.800)
O2': (-17.909,22.311,7.008)
C6: (-16.529,28.030,8.940)
C5: (-17.220,26.831,8.720)
C4: (-17.478,26.484,7.410)
P: (-23.408,24.163,7.716)
C4': (-20.506,24.001,5.101)
C2': (-19.050,23.096,6.720)
C2: (-16.488,28.293,6.641)
N1: (-16.170,28.758,7.858)
N3: (-17.134,27.170,6.311)
N6: (-16.208,28.462,10.164)
N7: (-17.723,25.874,9.588)
N9: (-18.162,25.298,7.477)
O5': (-22.056,23.770,6.956)
O3': (-18.756,22.521,4.392)
Image (generated by PyMOL):