Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.744 120.172 43.464 1.00 35.27 O
ATOM 2 P C A 26 47.459 120.024 42.032 1.00 35.45 P
ATOM 3 OP1 C A 26 48.409 118.881 42.124 1.00 32.82 O
ATOM 4 OP2 C A 26 47.951 121.354 41.611 1.00 35.79 O
ATOM 5 O5' C A 26 46.279 119.631 41.040 1.00 35.34 O
ATOM 6 C5' C A 26 45.613 118.371 41.147 1.00 33.27 C
ATOM 7 C4' C A 26 44.435 118.337 40.214 1.00 35.73 C
ATOM 8 O4' C A 26 43.543 119.438 40.534 1.00 35.10 O
ATOM 9 C3' C A 26 44.735 118.564 38.740 1.00 36.80 C
ATOM 10 O3' C A 26 45.211 117.406 38.081 1.00 38.36 O
ATOM 11 C2' C A 26 43.375 118.980 38.216 1.00 36.15 C
ATOM 12 O2' C A 26 42.480 117.890 38.149 1.00 36.47 O
ATOM 13 C1' C A 26 42.914 119.893 39.344 1.00 36.86 C
ATOM 14 N1 C A 26 43.310 121.287 39.090 1.00 38.79 N
ATOM 15 C2 C A 26 42.482 122.071 38.286 1.00 39.25 C
ATOM 16 O2 C A 26 41.477 121.556 37.779 1.00 39.04 O
ATOM 17 N3 C A 26 42.798 123.369 38.077 1.00 40.34 N
ATOM 18 C4 C A 26 43.893 123.887 38.635 1.00 39.81 C
ATOM 19 N4 C A 26 44.136 125.188 38.438 1.00 39.62 N
ATOM 20 C5 C A 26 44.779 123.099 39.429 1.00 39.20 C
ATOM 21 C6 C A 26 44.453 121.816 39.628 1.00 39.65 C
ATOM 22 P A A 27 46.252 117.566 36.870 1.00 42.97 P
ATOM 23 OP1 A A 27 46.714 116.198 36.544 1.00 41.41 O
ATOM 24 OP2 A A 27 47.247 118.616 37.208 1.00 42.01 O
ATOM 25 O5' A A 27 45.362 118.128 35.673 1.00 44.41 O
TER
ATOM 1 O3' U B 661 34.691 115.903 28.633 1.00 52.94 O
ATOM 2 P A B 662 34.961 116.490 30.113 1.00 53.08 P
ATOM 3 OP1 A B 662 33.699 116.994 30.730 1.00 49.86 O
ATOM 4 OP2 A B 662 36.138 117.397 30.006 1.00 53.63 O
ATOM 5 O5' A B 662 35.438 115.208 30.923 1.00 49.47 O
ATOM 6 C5' A B 662 36.323 114.255 30.316 1.00 47.86 C
ATOM 7 C4' A B 662 37.141 113.565 31.374 1.00 47.89 C
ATOM 8 O4' A B 662 38.039 114.533 31.976 1.00 49.42 O
ATOM 9 C3' A B 662 36.341 112.955 32.524 1.00 48.07 C
ATOM 10 O3' A B 662 37.017 111.800 32.987 1.00 46.98 O
ATOM 11 C2' A B 662 36.395 114.047 33.584 1.00 47.93 C
ATOM 12 O2' A B 662 36.293 113.538 34.895 1.00 50.13 O
ATOM 13 C1' A B 662 37.801 114.597 33.368 1.00 49.28 C
ATOM 14 N9 A B 662 37.981 115.978 33.816 1.00 47.90 N
ATOM 15 C8 A B 662 37.238 117.094 33.514 1.00 47.27 C
ATOM 16 N7 A B 662 37.666 118.188 34.092 1.00 46.67 N
ATOM 17 C5 A B 662 38.766 117.767 34.826 1.00 47.99 C
ATOM 18 C6 A B 662 39.664 118.451 35.668 1.00 46.69 C
ATOM 19 N6 A B 662 39.587 119.753 35.932 1.00 47.88 N
ATOM 20 N1 A B 662 40.655 117.737 36.238 1.00 45.83 N
ATOM 21 C2 A B 662 40.730 116.422 35.986 1.00 47.80 C
ATOM 22 N3 A B 662 39.945 115.663 35.222 1.00 48.83 N
ATOM 23 C4 A B 662 38.972 116.407 34.662 1.00 48.65 C
ATOM 24 P U B 663 36.466 110.351 32.588 1.00 48.03 P
ATOM 25 OP1 U B 663 37.327 109.341 33.252 1.00 47.31 O
ATOM 26 OP2 U B 663 36.310 110.317 31.113 1.00 49.32 O
ATOM 27 O5' U B 663 35.019 110.311 33.249 1.00 44.92 O
TER
ATOM 2 P C A 26 47.459 120.024 42.032 1.00 35.45 P
ATOM 3 OP1 C A 26 48.409 118.881 42.124 1.00 32.82 O
ATOM 4 OP2 C A 26 47.951 121.354 41.611 1.00 35.79 O
ATOM 5 O5' C A 26 46.279 119.631 41.040 1.00 35.34 O
ATOM 6 C5' C A 26 45.613 118.371 41.147 1.00 33.27 C
ATOM 7 C4' C A 26 44.435 118.337 40.214 1.00 35.73 C
ATOM 8 O4' C A 26 43.543 119.438 40.534 1.00 35.10 O
ATOM 9 C3' C A 26 44.735 118.564 38.740 1.00 36.80 C
ATOM 10 O3' C A 26 45.211 117.406 38.081 1.00 38.36 O
ATOM 11 C2' C A 26 43.375 118.980 38.216 1.00 36.15 C
ATOM 12 O2' C A 26 42.480 117.890 38.149 1.00 36.47 O
ATOM 13 C1' C A 26 42.914 119.893 39.344 1.00 36.86 C
ATOM 14 N1 C A 26 43.310 121.287 39.090 1.00 38.79 N
ATOM 15 C2 C A 26 42.482 122.071 38.286 1.00 39.25 C
ATOM 16 O2 C A 26 41.477 121.556 37.779 1.00 39.04 O
ATOM 17 N3 C A 26 42.798 123.369 38.077 1.00 40.34 N
ATOM 18 C4 C A 26 43.893 123.887 38.635 1.00 39.81 C
ATOM 19 N4 C A 26 44.136 125.188 38.438 1.00 39.62 N
ATOM 20 C5 C A 26 44.779 123.099 39.429 1.00 39.20 C
ATOM 21 C6 C A 26 44.453 121.816 39.628 1.00 39.65 C
ATOM 22 P A A 27 46.252 117.566 36.870 1.00 42.97 P
ATOM 23 OP1 A A 27 46.714 116.198 36.544 1.00 41.41 O
ATOM 24 OP2 A A 27 47.247 118.616 37.208 1.00 42.01 O
ATOM 25 O5' A A 27 45.362 118.128 35.673 1.00 44.41 O
TER
ATOM 1 O3' U B 661 34.691 115.903 28.633 1.00 52.94 O
ATOM 2 P A B 662 34.961 116.490 30.113 1.00 53.08 P
ATOM 3 OP1 A B 662 33.699 116.994 30.730 1.00 49.86 O
ATOM 4 OP2 A B 662 36.138 117.397 30.006 1.00 53.63 O
ATOM 5 O5' A B 662 35.438 115.208 30.923 1.00 49.47 O
ATOM 6 C5' A B 662 36.323 114.255 30.316 1.00 47.86 C
ATOM 7 C4' A B 662 37.141 113.565 31.374 1.00 47.89 C
ATOM 8 O4' A B 662 38.039 114.533 31.976 1.00 49.42 O
ATOM 9 C3' A B 662 36.341 112.955 32.524 1.00 48.07 C
ATOM 10 O3' A B 662 37.017 111.800 32.987 1.00 46.98 O
ATOM 11 C2' A B 662 36.395 114.047 33.584 1.00 47.93 C
ATOM 12 O2' A B 662 36.293 113.538 34.895 1.00 50.13 O
ATOM 13 C1' A B 662 37.801 114.597 33.368 1.00 49.28 C
ATOM 14 N9 A B 662 37.981 115.978 33.816 1.00 47.90 N
ATOM 15 C8 A B 662 37.238 117.094 33.514 1.00 47.27 C
ATOM 16 N7 A B 662 37.666 118.188 34.092 1.00 46.67 N
ATOM 17 C5 A B 662 38.766 117.767 34.826 1.00 47.99 C
ATOM 18 C6 A B 662 39.664 118.451 35.668 1.00 46.69 C
ATOM 19 N6 A B 662 39.587 119.753 35.932 1.00 47.88 N
ATOM 20 N1 A B 662 40.655 117.737 36.238 1.00 45.83 N
ATOM 21 C2 A B 662 40.730 116.422 35.986 1.00 47.80 C
ATOM 22 N3 A B 662 39.945 115.663 35.222 1.00 48.83 N
ATOM 23 C4 A B 662 38.972 116.407 34.662 1.00 48.65 C
ATOM 24 P U B 663 36.466 110.351 32.588 1.00 48.03 P
ATOM 25 OP1 U B 663 37.327 109.341 33.252 1.00 47.31 O
ATOM 26 OP2 U B 663 36.310 110.317 31.113 1.00 49.32 O
ATOM 27 O5' U B 663 35.019 110.311 33.249 1.00 44.92 O
TER
Atoms:
C2: (42.482,122.071,38.286)
OP1: (48.409,118.881,42.124)
OP2: (47.951,121.354,41.611)
C4: (43.893,123.887,38.635)
O5': (46.279,119.631,41.040)
C3': (44.735,118.564,38.740)
C1': (42.914,119.893,39.344)
O4': (43.543,119.438,40.534)
C5': (45.613,118.371,41.147)
P: (47.459,120.024,42.032)
O2: (41.477,121.556,37.779)
C4': (44.435,118.337,40.214)
C2': (43.375,118.980,38.216)
O2': (42.480,117.890,38.149)
N1: (43.310,121.287,39.090)
N3: (42.798,123.369,38.077)
N4: (44.136,125.188,38.438)
C6: (44.453,121.816,39.628)
C5: (44.779,123.099,39.429)
O3': (45.211,117.406,38.081)
OP1: (48.409,118.881,42.124)
OP2: (47.951,121.354,41.611)
C4: (43.893,123.887,38.635)
O5': (46.279,119.631,41.040)
C3': (44.735,118.564,38.740)
C1': (42.914,119.893,39.344)
O4': (43.543,119.438,40.534)
C5': (45.613,118.371,41.147)
P: (47.459,120.024,42.032)
O2: (41.477,121.556,37.779)
C4': (44.435,118.337,40.214)
C2': (43.375,118.980,38.216)
O2': (42.480,117.890,38.149)
N1: (43.310,121.287,39.090)
N3: (42.798,123.369,38.077)
N4: (44.136,125.188,38.438)
C6: (44.453,121.816,39.628)
C5: (44.779,123.099,39.429)
O3': (45.211,117.406,38.081)
OP1: (33.699,116.994,30.730)
OP2: (36.138,117.397,30.006)
C3': (36.341,112.955,32.524)
C1': (37.801,114.597,33.368)
C5': (36.323,114.255,30.316)
O4': (38.039,114.533,31.976)
C8: (37.238,117.094,33.514)
O2': (36.293,113.538,34.895)
C6: (39.664,118.451,35.668)
C5: (38.766,117.767,34.826)
C4: (38.972,116.407,34.662)
P: (34.961,116.490,30.113)
C4': (37.141,113.565,31.374)
C2': (36.395,114.047,33.584)
C2: (40.730,116.422,35.986)
N1: (40.655,117.737,36.238)
N3: (39.945,115.663,35.222)
N6: (39.587,119.753,35.932)
N7: (37.666,118.188,34.092)
N9: (37.981,115.978,33.816)
O5': (35.438,115.208,30.923)
O3': (37.017,111.800,32.987)
OP2: (36.138,117.397,30.006)
C3': (36.341,112.955,32.524)
C1': (37.801,114.597,33.368)
C5': (36.323,114.255,30.316)
O4': (38.039,114.533,31.976)
C8: (37.238,117.094,33.514)
O2': (36.293,113.538,34.895)
C6: (39.664,118.451,35.668)
C5: (38.766,117.767,34.826)
C4: (38.972,116.407,34.662)
P: (34.961,116.490,30.113)
C4': (37.141,113.565,31.374)
C2': (36.395,114.047,33.584)
C2: (40.730,116.422,35.986)
N1: (40.655,117.737,36.238)
N3: (39.945,115.663,35.222)
N6: (39.587,119.753,35.932)
N7: (37.666,118.188,34.092)
N9: (37.981,115.978,33.816)
O5': (35.438,115.208,30.923)
O3': (37.017,111.800,32.987)
Image (generated by PyMOL):