ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A1042:A1083

Extra

PDB:
ATOM 1 O3' A A1041 37.837 95.760 103.073 1.00 27.02 O
ATOM 2 P C A1042 38.536 94.698 104.064 1.00 29.15 P
ATOM 3 OP1 C A1042 40.009 94.766 103.952 1.00 28.41 O
ATOM 4 OP2 C A1042 37.863 93.398 103.873 1.00 26.49 O
ATOM 5 O5' C A1042 38.160 95.194 105.528 1.00 29.21 O
ATOM 6 C5' C A1042 38.622 94.442 106.676 1.00 28.14 C
ATOM 7 C4' C A1042 37.663 94.593 107.830 1.00 27.58 C
ATOM 8 O4' C A1042 37.695 95.948 108.338 1.00 28.99 O
ATOM 9 C3' C A1042 36.203 94.360 107.499 1.00 27.55 C
ATOM 10 O3' C A1042 35.920 92.968 107.502 1.00 29.40 O
ATOM 11 C2' C A1042 35.510 95.095 108.636 1.00 28.23 C
ATOM 12 O2' C A1042 35.605 94.381 109.852 1.00 28.90 O
ATOM 13 C1' C A1042 36.400 96.329 108.764 1.00 28.74 C
ATOM 14 N1 C A1042 35.929 97.430 107.907 1.00 31.29 N
ATOM 15 C2 C A1042 34.771 98.113 108.277 1.00 32.22 C
ATOM 16 O2 C A1042 34.178 97.781 109.321 1.00 33.21 O
ATOM 17 N3 C A1042 34.321 99.118 107.486 1.00 33.61 N
ATOM 18 C4 C A1042 34.985 99.447 106.375 1.00 31.99 C
ATOM 19 N4 C A1042 34.508 100.449 105.635 1.00 32.93 N
ATOM 20 C5 C A1042 36.164 98.768 105.978 1.00 31.14 C
ATOM 21 C6 C A1042 36.598 97.778 106.763 1.00 31.74 C
ATOM 22 P C A1043 34.687 92.413 106.650 1.00 31.11 P
ATOM 23 OP1 C A1043 34.746 90.936 106.750 1.00 32.43 O
ATOM 24 OP2 C A1043 34.689 93.059 105.312 1.00 32.51 O
ATOM 25 O5' C A1043 33.426 92.912 107.476 1.00 29.75 O
TER

ATOM 1 O3' A B1082 36.193 100.076 120.588 1.00 39.77 O
ATOM 2 P A B1083 35.113 99.408 119.602 1.00 42.21 P
ATOM 3 OP1 A B1083 35.588 99.692 118.223 1.00 40.60 O
ATOM 4 OP2 A B1083 33.738 99.802 120.006 1.00 42.83 O
ATOM 5 O5' A B1083 35.239 97.853 119.893 1.00 36.33 O
ATOM 6 C5' A B1083 36.451 97.159 119.643 1.00 31.62 C
ATOM 7 C4' A B1083 36.155 95.733 119.291 1.00 29.99 C
ATOM 8 O4' A B1083 34.855 95.622 118.674 1.00 29.64 O
ATOM 9 C3' A B1083 37.129 95.183 118.282 1.00 30.23 C
ATOM 10 O3' A B1083 38.280 94.728 118.949 1.00 31.56 O
ATOM 11 C2' A B1083 36.310 94.117 117.576 1.00 30.13 C
ATOM 12 O2' A B1083 36.195 92.916 118.307 1.00 31.90 O
ATOM 13 C1' A B1083 34.947 94.806 117.517 1.00 29.46 C
ATOM 14 N9 A B1083 34.809 95.676 116.346 1.00 28.73 N
ATOM 15 C8 A B1083 34.450 97.001 116.340 1.00 28.44 C
ATOM 16 N7 A B1083 34.369 97.523 115.146 1.00 26.99 N
ATOM 17 C5 A B1083 34.707 96.478 114.305 1.00 26.92 C
ATOM 18 C6 A B1083 34.794 96.394 112.916 1.00 26.94 C
ATOM 19 N6 A B1083 34.513 97.412 112.107 1.00 25.29 N
ATOM 20 N1 A B1083 35.171 95.221 112.381 1.00 27.35 N
ATOM 21 C2 A B1083 35.433 94.200 113.206 1.00 28.37 C
ATOM 22 N3 A B1083 35.372 94.150 114.535 1.00 28.14 N
ATOM 23 C4 A B1083 34.996 95.337 115.029 1.00 27.32 C
ATOM 24 P U B1084 39.633 95.556 118.813 1.00 31.79 P
ATOM 25 OP1 U B1084 40.621 94.931 119.710 1.00 33.64 O
ATOM 26 OP2 U B1084 39.332 96.995 118.932 1.00 31.17 O
ATOM 27 O5' U B1084 40.071 95.268 117.320 1.00 31.34 O
TER

Atoms:
C2: (34.771,98.113,108.277)
OP1: (40.009,94.766,103.952)
OP2: (37.863,93.398,103.873)
C4: (34.985,99.447,106.375)
O5': (38.160,95.194,105.528)
C3': (36.203,94.360,107.499)
C1': (36.400,96.329,108.764)
O4': (37.695,95.948,108.338)
C5': (38.622,94.442,106.676)
P: (38.536,94.698,104.064)
O2: (34.178,97.781,109.321)
C4': (37.663,94.593,107.830)
C2': (35.510,95.095,108.636)
O2': (35.605,94.381,109.852)
N1: (35.929,97.430,107.907)
N3: (34.321,99.118,107.486)
N4: (34.508,100.449,105.635)
C6: (36.598,97.778,106.763)
C5: (36.164,98.768,105.978)
O3': (35.920,92.968,107.502)
OP1: (35.588,99.692,118.223)
OP2: (33.738,99.802,120.006)
C3': (37.129,95.183,118.282)
C1': (34.947,94.806,117.517)
C5': (36.451,97.159,119.643)
O4': (34.855,95.622,118.674)
C8: (34.450,97.001,116.340)
O2': (36.195,92.916,118.307)
C6: (34.794,96.394,112.916)
C5: (34.707,96.478,114.305)
C4: (34.996,95.337,115.029)
P: (35.113,99.408,119.602)
C4': (36.155,95.733,119.291)
C2': (36.310,94.117,117.576)
C2: (35.433,94.200,113.206)
N1: (35.171,95.221,112.381)
N3: (35.372,94.150,114.535)
N6: (34.513,97.412,112.107)
N7: (34.369,97.523,115.146)
N9: (34.809,95.676,116.346)
O5': (35.239,97.853,119.893)
O3': (38.280,94.728,118.949)
Image (generated by PyMOL):
PyMOL image
show in jmol