Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01683:01352
Extra
PDB:
ATOM 1 O3' U A1682 60.046 165.373 86.612 1.00 33.77 O
ATOM 2 P C A1683 58.865 164.335 86.301 1.00 32.82 P
ATOM 3 OP1 C A1683 59.037 163.198 87.236 1.00 36.66 O
ATOM 4 OP2 C A1683 58.819 164.090 84.844 1.00 33.54 O
ATOM 5 O5' C A1683 57.548 165.115 86.723 1.00 32.48 O
ATOM 6 C5' C A1683 57.405 165.621 88.056 1.00 33.78 C
ATOM 7 C4' C A1683 56.287 166.622 88.106 1.00 34.79 C
ATOM 8 O4' C A1683 55.020 165.930 87.951 1.00 35.71 O
ATOM 9 C3' C A1683 56.116 167.362 89.418 1.00 35.02 C
ATOM 10 O3' C A1683 57.062 168.421 89.539 1.00 37.69 O
ATOM 11 C2' C A1683 54.680 167.846 89.294 1.00 34.76 C
ATOM 12 O2' C A1683 54.552 168.900 88.359 1.00 36.32 O
ATOM 13 C1' C A1683 54.019 166.609 88.688 1.00 34.17 C
ATOM 14 N1 C A1683 53.488 165.702 89.719 1.00 32.19 N
ATOM 15 C2 C A1683 52.192 165.915 90.182 1.00 32.96 C
ATOM 16 O2 C A1683 51.529 166.842 89.695 1.00 34.90 O
ATOM 17 N3 C A1683 51.691 165.109 91.144 1.00 30.58 N
ATOM 18 C4 C A1683 52.434 164.117 91.631 1.00 31.27 C
ATOM 19 N4 C A1683 51.897 163.338 92.572 1.00 32.54 N
ATOM 20 C5 C A1683 53.760 163.874 91.176 1.00 29.94 C
ATOM 21 C6 C A1683 54.242 164.681 90.225 1.00 31.23 C
ATOM 22 P G A1684 57.318 169.102 90.974 1.00 37.65 P
ATOM 23 OP1 G A1684 58.480 169.999 90.803 1.00 39.59 O
ATOM 24 OP2 G A1684 57.350 168.061 92.036 1.00 37.30 O
ATOM 25 O5' G A1684 56.014 169.985 91.187 1.00 37.49 O
TER
ATOM 1 O3' A B1351 47.690 177.870 86.322 1.00 47.09 O
ATOM 2 P A B1352 47.302 177.234 87.745 1.00 49.11 P
ATOM 3 OP1 A B1352 46.729 175.888 87.496 1.00 49.25 O
ATOM 4 OP2 A B1352 46.518 178.237 88.508 1.00 48.22 O
ATOM 5 O5' A B1352 48.695 177.035 88.483 1.00 47.99 O
ATOM 6 C5' A B1352 49.386 178.148 89.062 1.00 44.37 C
ATOM 7 C4' A B1352 50.838 177.804 89.252 1.00 42.93 C
ATOM 8 O4' A B1352 50.962 176.726 90.213 1.00 42.16 O
ATOM 9 C3' A B1352 51.528 177.277 88.010 1.00 42.14 C
ATOM 10 O3' A B1352 51.951 178.352 87.200 1.00 41.27 O
ATOM 11 C2' A B1352 52.690 176.498 88.600 1.00 42.32 C
ATOM 12 O2' A B1352 53.723 177.351 89.041 1.00 42.86 O
ATOM 13 C1' A B1352 52.031 175.877 89.834 1.00 42.66 C
ATOM 14 N9 A B1352 51.496 174.528 89.641 1.00 42.40 N
ATOM 15 C8 A B1352 50.177 174.148 89.674 1.00 43.30 C
ATOM 16 N7 A B1352 49.993 172.860 89.534 1.00 44.58 N
ATOM 17 C5 A B1352 51.277 172.355 89.386 1.00 44.20 C
ATOM 18 C6 A B1352 51.761 171.048 89.219 1.00 44.13 C
ATOM 19 N6 A B1352 50.976 169.972 89.185 1.00 45.02 N
ATOM 20 N1 A B1352 53.093 170.883 89.096 1.00 44.69 N
ATOM 21 C2 A B1352 53.880 171.965 89.145 1.00 45.11 C
ATOM 22 N3 A B1352 53.544 173.244 89.307 1.00 43.62 N
ATOM 23 C4 A B1352 52.212 173.373 89.427 1.00 42.98 C
ATOM 24 P C B1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 25 OP1 C B1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 26 OP2 C B1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 27 O5' C B1353 52.777 177.588 84.955 1.00 41.20 O
TER
ATOM 2 P C A1683 58.865 164.335 86.301 1.00 32.82 P
ATOM 3 OP1 C A1683 59.037 163.198 87.236 1.00 36.66 O
ATOM 4 OP2 C A1683 58.819 164.090 84.844 1.00 33.54 O
ATOM 5 O5' C A1683 57.548 165.115 86.723 1.00 32.48 O
ATOM 6 C5' C A1683 57.405 165.621 88.056 1.00 33.78 C
ATOM 7 C4' C A1683 56.287 166.622 88.106 1.00 34.79 C
ATOM 8 O4' C A1683 55.020 165.930 87.951 1.00 35.71 O
ATOM 9 C3' C A1683 56.116 167.362 89.418 1.00 35.02 C
ATOM 10 O3' C A1683 57.062 168.421 89.539 1.00 37.69 O
ATOM 11 C2' C A1683 54.680 167.846 89.294 1.00 34.76 C
ATOM 12 O2' C A1683 54.552 168.900 88.359 1.00 36.32 O
ATOM 13 C1' C A1683 54.019 166.609 88.688 1.00 34.17 C
ATOM 14 N1 C A1683 53.488 165.702 89.719 1.00 32.19 N
ATOM 15 C2 C A1683 52.192 165.915 90.182 1.00 32.96 C
ATOM 16 O2 C A1683 51.529 166.842 89.695 1.00 34.90 O
ATOM 17 N3 C A1683 51.691 165.109 91.144 1.00 30.58 N
ATOM 18 C4 C A1683 52.434 164.117 91.631 1.00 31.27 C
ATOM 19 N4 C A1683 51.897 163.338 92.572 1.00 32.54 N
ATOM 20 C5 C A1683 53.760 163.874 91.176 1.00 29.94 C
ATOM 21 C6 C A1683 54.242 164.681 90.225 1.00 31.23 C
ATOM 22 P G A1684 57.318 169.102 90.974 1.00 37.65 P
ATOM 23 OP1 G A1684 58.480 169.999 90.803 1.00 39.59 O
ATOM 24 OP2 G A1684 57.350 168.061 92.036 1.00 37.30 O
ATOM 25 O5' G A1684 56.014 169.985 91.187 1.00 37.49 O
TER
ATOM 1 O3' A B1351 47.690 177.870 86.322 1.00 47.09 O
ATOM 2 P A B1352 47.302 177.234 87.745 1.00 49.11 P
ATOM 3 OP1 A B1352 46.729 175.888 87.496 1.00 49.25 O
ATOM 4 OP2 A B1352 46.518 178.237 88.508 1.00 48.22 O
ATOM 5 O5' A B1352 48.695 177.035 88.483 1.00 47.99 O
ATOM 6 C5' A B1352 49.386 178.148 89.062 1.00 44.37 C
ATOM 7 C4' A B1352 50.838 177.804 89.252 1.00 42.93 C
ATOM 8 O4' A B1352 50.962 176.726 90.213 1.00 42.16 O
ATOM 9 C3' A B1352 51.528 177.277 88.010 1.00 42.14 C
ATOM 10 O3' A B1352 51.951 178.352 87.200 1.00 41.27 O
ATOM 11 C2' A B1352 52.690 176.498 88.600 1.00 42.32 C
ATOM 12 O2' A B1352 53.723 177.351 89.041 1.00 42.86 O
ATOM 13 C1' A B1352 52.031 175.877 89.834 1.00 42.66 C
ATOM 14 N9 A B1352 51.496 174.528 89.641 1.00 42.40 N
ATOM 15 C8 A B1352 50.177 174.148 89.674 1.00 43.30 C
ATOM 16 N7 A B1352 49.993 172.860 89.534 1.00 44.58 N
ATOM 17 C5 A B1352 51.277 172.355 89.386 1.00 44.20 C
ATOM 18 C6 A B1352 51.761 171.048 89.219 1.00 44.13 C
ATOM 19 N6 A B1352 50.976 169.972 89.185 1.00 45.02 N
ATOM 20 N1 A B1352 53.093 170.883 89.096 1.00 44.69 N
ATOM 21 C2 A B1352 53.880 171.965 89.145 1.00 45.11 C
ATOM 22 N3 A B1352 53.544 173.244 89.307 1.00 43.62 N
ATOM 23 C4 A B1352 52.212 173.373 89.427 1.00 42.98 C
ATOM 24 P C B1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 25 OP1 C B1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 26 OP2 C B1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 27 O5' C B1353 52.777 177.588 84.955 1.00 41.20 O
TER
Atoms:
C2: (52.192,165.915,90.182)
OP1: (59.037,163.198,87.236)
OP2: (58.819,164.090,84.844)
C4: (52.434,164.117,91.631)
O5': (57.548,165.115,86.723)
C3': (56.116,167.362,89.418)
C1': (54.019,166.609,88.688)
O4': (55.020,165.930,87.951)
C5': (57.405,165.621,88.056)
P: (58.865,164.335,86.301)
O2: (51.529,166.842,89.695)
C4': (56.287,166.622,88.106)
C2': (54.680,167.846,89.294)
O2': (54.552,168.900,88.359)
N1: (53.488,165.702,89.719)
N3: (51.691,165.109,91.144)
N4: (51.897,163.338,92.572)
C6: (54.242,164.681,90.225)
C5: (53.760,163.874,91.176)
O3': (57.062,168.421,89.539)
OP1: (59.037,163.198,87.236)
OP2: (58.819,164.090,84.844)
C4: (52.434,164.117,91.631)
O5': (57.548,165.115,86.723)
C3': (56.116,167.362,89.418)
C1': (54.019,166.609,88.688)
O4': (55.020,165.930,87.951)
C5': (57.405,165.621,88.056)
P: (58.865,164.335,86.301)
O2: (51.529,166.842,89.695)
C4': (56.287,166.622,88.106)
C2': (54.680,167.846,89.294)
O2': (54.552,168.900,88.359)
N1: (53.488,165.702,89.719)
N3: (51.691,165.109,91.144)
N4: (51.897,163.338,92.572)
C6: (54.242,164.681,90.225)
C5: (53.760,163.874,91.176)
O3': (57.062,168.421,89.539)
OP1: (46.729,175.888,87.496)
OP2: (46.518,178.237,88.508)
C3': (51.528,177.277,88.010)
C1': (52.031,175.877,89.834)
C5': (49.386,178.148,89.062)
O4': (50.962,176.726,90.213)
C8: (50.177,174.148,89.674)
O2': (53.723,177.351,89.041)
C6: (51.761,171.048,89.219)
C5: (51.277,172.355,89.386)
C4: (52.212,173.373,89.427)
P: (47.302,177.234,87.745)
C4': (50.838,177.804,89.252)
C2': (52.690,176.498,88.600)
C2: (53.880,171.965,89.145)
N1: (53.093,170.883,89.096)
N3: (53.544,173.244,89.307)
N6: (50.976,169.972,89.185)
N7: (49.993,172.860,89.534)
N9: (51.496,174.528,89.641)
O5': (48.695,177.035,88.483)
O3': (51.951,178.352,87.200)
OP2: (46.518,178.237,88.508)
C3': (51.528,177.277,88.010)
C1': (52.031,175.877,89.834)
C5': (49.386,178.148,89.062)
O4': (50.962,176.726,90.213)
C8: (50.177,174.148,89.674)
O2': (53.723,177.351,89.041)
C6: (51.761,171.048,89.219)
C5: (51.277,172.355,89.386)
C4: (52.212,173.373,89.427)
P: (47.302,177.234,87.745)
C4': (50.838,177.804,89.252)
C2': (52.690,176.498,88.600)
C2: (53.880,171.965,89.145)
N1: (53.093,170.883,89.096)
N3: (53.544,173.244,89.307)
N6: (50.976,169.972,89.185)
N7: (49.993,172.860,89.534)
N9: (51.496,174.528,89.641)
O5': (48.695,177.035,88.483)
O3': (51.951,178.352,87.200)
Image (generated by PyMOL):