ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A1042:A1083

Extra

PDB:
ATOM 1 O3' A A1041 38.129 95.988 103.626 1.00 38.88 O
ATOM 2 P C A1042 38.798 94.918 104.621 1.00 41.37 P
ATOM 3 OP1 C A1042 40.261 94.940 104.476 1.00 42.29 O
ATOM 4 OP2 C A1042 38.075 93.637 104.459 1.00 40.47 O
ATOM 5 O5' C A1042 38.469 95.463 106.080 1.00 41.73 O
ATOM 6 C5' C A1042 38.951 94.744 107.239 1.00 40.78 C
ATOM 7 C4' C A1042 38.002 94.892 108.408 1.00 39.72 C
ATOM 8 O4' C A1042 38.012 96.254 108.883 1.00 39.77 O
ATOM 9 C3' C A1042 36.539 94.596 108.157 1.00 39.04 C
ATOM 10 O3' C A1042 36.286 93.191 108.199 1.00 39.15 O
ATOM 11 C2' C A1042 35.872 95.358 109.295 1.00 38.58 C
ATOM 12 O2' C A1042 36.071 94.760 110.552 1.00 39.90 O
ATOM 13 C1' C A1042 36.731 96.610 109.351 1.00 38.30 C
ATOM 14 N1 C A1042 36.234 97.711 108.523 1.00 39.72 N
ATOM 15 C2 C A1042 35.148 98.444 108.960 1.00 40.13 C
ATOM 16 O2 C A1042 34.616 98.146 110.034 1.00 41.05 O
ATOM 17 N3 C A1042 34.695 99.457 108.197 1.00 40.73 N
ATOM 18 C4 C A1042 35.289 99.738 107.038 1.00 41.45 C
ATOM 19 N4 C A1042 34.794 100.736 106.306 1.00 43.34 N
ATOM 20 C5 C A1042 36.405 99.009 106.574 1.00 41.60 C
ATOM 21 C6 C A1042 36.837 98.012 107.336 1.00 40.71 C
ATOM 22 P C A1043 35.018 92.602 107.424 1.00 39.29 P
ATOM 23 OP1 C A1043 35.021 91.134 107.603 1.00 39.62 O
ATOM 24 OP2 C A1043 35.044 93.177 106.070 1.00 35.97 O
ATOM 25 O5' C A1043 33.789 93.182 108.243 1.00 35.80 O
TER

ATOM 1 O3' A B1082 36.378 100.356 121.178 1.00 41.77 O
ATOM 2 P A B1083 35.253 99.717 120.237 1.00 42.03 P
ATOM 3 OP1 A B1083 35.685 100.072 118.874 1.00 42.49 O
ATOM 4 OP2 A B1083 33.891 100.100 120.699 1.00 42.49 O
ATOM 5 O5' A B1083 35.408 98.154 120.477 1.00 38.97 O
ATOM 6 C5' A B1083 36.638 97.487 120.201 1.00 35.86 C
ATOM 7 C4' A B1083 36.373 96.057 119.875 1.00 35.13 C
ATOM 8 O4' A B1083 35.097 95.946 119.225 1.00 35.88 O
ATOM 9 C3' A B1083 37.369 95.469 118.908 1.00 36.15 C
ATOM 10 O3' A B1083 38.485 94.962 119.601 1.00 36.35 O
ATOM 11 C2' A B1083 36.558 94.406 118.178 1.00 37.11 C
ATOM 12 O2' A B1083 36.472 93.176 118.875 1.00 36.68 O
ATOM 13 C1' A B1083 35.195 95.091 118.094 1.00 36.27 C
ATOM 14 N9 A B1083 35.030 95.925 116.896 1.00 35.64 N
ATOM 15 C8 A B1083 34.706 97.261 116.894 1.00 35.75 C
ATOM 16 N7 A B1083 34.626 97.787 115.705 1.00 34.43 N
ATOM 17 C5 A B1083 34.915 96.733 114.859 1.00 32.88 C
ATOM 18 C6 A B1083 34.994 96.661 113.479 1.00 31.75 C
ATOM 19 N6 A B1083 34.787 97.710 112.692 1.00 29.22 N
ATOM 20 N1 A B1083 35.296 95.471 112.926 1.00 33.03 N
ATOM 21 C2 A B1083 35.510 94.431 113.737 1.00 35.82 C
ATOM 22 N3 A B1083 35.472 94.377 115.071 1.00 36.30 N
ATOM 23 C4 A B1083 35.161 95.577 115.575 1.00 34.23 C
ATOM 24 P U B1084 39.881 95.697 119.470 1.00 33.64 P
ATOM 25 OP1 U B1084 40.805 94.948 120.349 1.00 34.38 O
ATOM 26 OP2 U B1084 39.654 97.126 119.692 1.00 32.16 O
ATOM 27 O5' U B1084 40.272 95.445 117.953 1.00 33.63 O
TER

Atoms:
C2: (35.148,98.444,108.960)
OP1: (40.261,94.940,104.476)
OP2: (38.075,93.637,104.459)
C4: (35.289,99.738,107.038)
O5': (38.469,95.463,106.080)
C3': (36.539,94.596,108.157)
C1': (36.731,96.610,109.351)
O4': (38.012,96.254,108.883)
C5': (38.951,94.744,107.239)
P: (38.798,94.918,104.621)
O2: (34.616,98.146,110.034)
C4': (38.002,94.892,108.408)
C2': (35.872,95.358,109.295)
O2': (36.071,94.760,110.552)
N1: (36.234,97.711,108.523)
N3: (34.695,99.457,108.197)
N4: (34.794,100.736,106.306)
C6: (36.837,98.012,107.336)
C5: (36.405,99.009,106.574)
O3': (36.286,93.191,108.199)
OP1: (35.685,100.072,118.874)
OP2: (33.891,100.100,120.699)
C3': (37.369,95.469,118.908)
C1': (35.195,95.091,118.094)
C5': (36.638,97.487,120.201)
O4': (35.097,95.946,119.225)
C8: (34.706,97.261,116.894)
O2': (36.472,93.176,118.875)
C6: (34.994,96.661,113.479)
C5: (34.915,96.733,114.859)
C4: (35.161,95.577,115.575)
P: (35.253,99.717,120.237)
C4': (36.373,96.057,119.875)
C2': (36.558,94.406,118.178)
C2: (35.510,94.431,113.737)
N1: (35.296,95.471,112.926)
N3: (35.472,94.377,115.071)
N6: (34.787,97.710,112.692)
N7: (34.626,97.787,115.705)
N9: (35.030,95.925,116.896)
O5': (35.408,98.154,120.477)
O3': (38.485,94.962,119.601)
Image (generated by PyMOL):
PyMOL image
show in jmol