Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2G3S:I5:I4
Extra
PDB:
ATOM 1 O3' U A 4 -3.349 8.057 22.085 1.00 1.00 O
ATOM 2 P G A 5 -3.175 8.815 20.678 1.00 2.26 P
ATOM 3 OP1 G A 5 -3.107 7.732 19.656 1.00 1.00 O
ATOM 4 OP2 G A 5 -2.075 9.789 20.790 1.00 3.39 O
ATOM 5 O5' G A 5 -4.533 9.626 20.489 1.00 2.67 O
ATOM 6 C5' G A 5 -5.738 8.969 20.117 1.00 1.00 C
ATOM 7 C4' G A 5 -6.801 9.985 19.774 1.00 2.89 C
ATOM 8 O4' G A 5 -7.089 10.808 20.943 1.00 1.11 O
ATOM 9 C3' G A 5 -6.426 11.005 18.712 1.00 1.46 C
ATOM 10 O3' G A 5 -6.594 10.473 17.407 1.00 2.28 O
ATOM 11 C2' G A 5 -7.425 12.114 19.000 1.00 2.99 C
ATOM 12 O2' G A 5 -8.733 11.773 18.583 1.00 4.36 O
ATOM 13 C1' G A 5 -7.389 12.136 20.528 1.00 2.21 C
ATOM 14 N9 G A 5 -6.356 13.021 21.058 1.00 1.00 N
ATOM 15 C8 G A 5 -5.121 12.649 21.531 1.00 2.18 C
ATOM 16 N7 G A 5 -4.418 13.652 21.980 1.00 3.08 N
ATOM 17 C5 G A 5 -5.237 14.756 21.788 1.00 2.40 C
ATOM 18 C6 G A 5 -5.023 16.121 22.105 1.00 1.00 C
ATOM 19 O6 G A 5 -4.040 16.643 22.635 1.00 2.40 O
ATOM 20 N1 G A 5 -6.113 16.906 21.745 1.00 1.00 N
ATOM 21 C2 G A 5 -7.265 16.438 21.159 1.00 1.00 C
ATOM 22 N2 G A 5 -8.209 17.353 20.899 1.00 1.00 N
ATOM 23 N3 G A 5 -7.477 15.169 20.856 1.00 1.00 N
ATOM 24 C4 G A 5 -6.430 14.386 21.202 1.00 1.93 C
ATOM 25 P C A 6 -5.669 11.004 16.215 1.00 4.29 P
ATOM 26 OP1 C A 6 -5.956 10.139 15.044 1.00 6.85 O
ATOM 27 OP2 C A 6 -4.279 11.149 16.696 1.00 4.43 O
ATOM 28 O5' C A 6 -6.206 12.471 15.927 1.00 1.19 O
TER
ATOM 1 O3' G B 3 0.652 6.950 26.893 1.00 1.00 O
ATOM 2 P U B 4 0.753 7.520 25.394 1.00 1.00 P
ATOM 3 OP1 U B 4 1.091 6.351 24.547 1.00 1.00 O
ATOM 4 OP2 U B 4 1.599 8.731 25.344 1.00 1.00 O
ATOM 5 O5' U B 4 -0.724 7.994 25.036 1.00 2.65 O
ATOM 6 C5' U B 4 -1.740 7.056 24.715 1.00 1.75 C
ATOM 7 C4' U B 4 -3.042 7.773 24.470 1.00 1.43 C
ATOM 8 O4' U B 4 -3.319 8.620 25.613 1.00 1.00 O
ATOM 9 C3' U B 4 -3.056 8.741 23.294 1.00 1.00 C
ATOM 10 O3' U B 4 -3.349 8.057 22.085 1.00 1.00 O
ATOM 11 C2' U B 4 -4.186 9.688 23.675 1.00 1.00 C
ATOM 12 O2' U B 4 -5.466 9.156 23.417 1.00 1.00 O
ATOM 13 C1' U B 4 -3.991 9.789 25.185 1.00 1.00 C
ATOM 14 N1 U B 4 -3.204 10.960 25.590 1.00 1.00 N
ATOM 15 C2 U B 4 -3.846 12.181 25.603 1.00 1.94 C
ATOM 16 O2 U B 4 -5.012 12.319 25.264 1.00 1.00 O
ATOM 17 N3 U B 4 -3.075 13.238 26.017 1.00 1.02 N
ATOM 18 C4 U B 4 -1.746 13.197 26.391 1.00 1.27 C
ATOM 19 O4 U B 4 -1.178 14.241 26.707 1.00 1.00 O
ATOM 20 C5 U B 4 -1.148 11.897 26.334 1.00 1.00 C
ATOM 21 C6 U B 4 -1.879 10.849 25.950 1.00 1.00 C
ATOM 22 P G B 5 -3.175 8.815 20.678 1.00 2.26 P
ATOM 23 OP1 G B 5 -3.107 7.732 19.656 1.00 1.00 O
ATOM 24 OP2 G B 5 -2.075 9.789 20.790 1.00 3.39 O
ATOM 25 O5' G B 5 -4.533 9.626 20.489 1.00 2.67 O
TER
ATOM 2 P G A 5 -3.175 8.815 20.678 1.00 2.26 P
ATOM 3 OP1 G A 5 -3.107 7.732 19.656 1.00 1.00 O
ATOM 4 OP2 G A 5 -2.075 9.789 20.790 1.00 3.39 O
ATOM 5 O5' G A 5 -4.533 9.626 20.489 1.00 2.67 O
ATOM 6 C5' G A 5 -5.738 8.969 20.117 1.00 1.00 C
ATOM 7 C4' G A 5 -6.801 9.985 19.774 1.00 2.89 C
ATOM 8 O4' G A 5 -7.089 10.808 20.943 1.00 1.11 O
ATOM 9 C3' G A 5 -6.426 11.005 18.712 1.00 1.46 C
ATOM 10 O3' G A 5 -6.594 10.473 17.407 1.00 2.28 O
ATOM 11 C2' G A 5 -7.425 12.114 19.000 1.00 2.99 C
ATOM 12 O2' G A 5 -8.733 11.773 18.583 1.00 4.36 O
ATOM 13 C1' G A 5 -7.389 12.136 20.528 1.00 2.21 C
ATOM 14 N9 G A 5 -6.356 13.021 21.058 1.00 1.00 N
ATOM 15 C8 G A 5 -5.121 12.649 21.531 1.00 2.18 C
ATOM 16 N7 G A 5 -4.418 13.652 21.980 1.00 3.08 N
ATOM 17 C5 G A 5 -5.237 14.756 21.788 1.00 2.40 C
ATOM 18 C6 G A 5 -5.023 16.121 22.105 1.00 1.00 C
ATOM 19 O6 G A 5 -4.040 16.643 22.635 1.00 2.40 O
ATOM 20 N1 G A 5 -6.113 16.906 21.745 1.00 1.00 N
ATOM 21 C2 G A 5 -7.265 16.438 21.159 1.00 1.00 C
ATOM 22 N2 G A 5 -8.209 17.353 20.899 1.00 1.00 N
ATOM 23 N3 G A 5 -7.477 15.169 20.856 1.00 1.00 N
ATOM 24 C4 G A 5 -6.430 14.386 21.202 1.00 1.93 C
ATOM 25 P C A 6 -5.669 11.004 16.215 1.00 4.29 P
ATOM 26 OP1 C A 6 -5.956 10.139 15.044 1.00 6.85 O
ATOM 27 OP2 C A 6 -4.279 11.149 16.696 1.00 4.43 O
ATOM 28 O5' C A 6 -6.206 12.471 15.927 1.00 1.19 O
TER
ATOM 1 O3' G B 3 0.652 6.950 26.893 1.00 1.00 O
ATOM 2 P U B 4 0.753 7.520 25.394 1.00 1.00 P
ATOM 3 OP1 U B 4 1.091 6.351 24.547 1.00 1.00 O
ATOM 4 OP2 U B 4 1.599 8.731 25.344 1.00 1.00 O
ATOM 5 O5' U B 4 -0.724 7.994 25.036 1.00 2.65 O
ATOM 6 C5' U B 4 -1.740 7.056 24.715 1.00 1.75 C
ATOM 7 C4' U B 4 -3.042 7.773 24.470 1.00 1.43 C
ATOM 8 O4' U B 4 -3.319 8.620 25.613 1.00 1.00 O
ATOM 9 C3' U B 4 -3.056 8.741 23.294 1.00 1.00 C
ATOM 10 O3' U B 4 -3.349 8.057 22.085 1.00 1.00 O
ATOM 11 C2' U B 4 -4.186 9.688 23.675 1.00 1.00 C
ATOM 12 O2' U B 4 -5.466 9.156 23.417 1.00 1.00 O
ATOM 13 C1' U B 4 -3.991 9.789 25.185 1.00 1.00 C
ATOM 14 N1 U B 4 -3.204 10.960 25.590 1.00 1.00 N
ATOM 15 C2 U B 4 -3.846 12.181 25.603 1.00 1.94 C
ATOM 16 O2 U B 4 -5.012 12.319 25.264 1.00 1.00 O
ATOM 17 N3 U B 4 -3.075 13.238 26.017 1.00 1.02 N
ATOM 18 C4 U B 4 -1.746 13.197 26.391 1.00 1.27 C
ATOM 19 O4 U B 4 -1.178 14.241 26.707 1.00 1.00 O
ATOM 20 C5 U B 4 -1.148 11.897 26.334 1.00 1.00 C
ATOM 21 C6 U B 4 -1.879 10.849 25.950 1.00 1.00 C
ATOM 22 P G B 5 -3.175 8.815 20.678 1.00 2.26 P
ATOM 23 OP1 G B 5 -3.107 7.732 19.656 1.00 1.00 O
ATOM 24 OP2 G B 5 -2.075 9.789 20.790 1.00 3.39 O
ATOM 25 O5' G B 5 -4.533 9.626 20.489 1.00 2.67 O
TER
Atoms:
OP1: (-3.107,7.732,19.656)
OP2: (-2.075,9.789,20.790)
C3': (-6.426,11.005,18.712)
C1': (-7.389,12.136,20.528)
C5': (-5.738,8.969,20.117)
O6: (-4.040,16.643,22.635)
O4': (-7.089,10.808,20.943)
C8: (-5.121,12.649,21.531)
C2: (-7.265,16.438,21.159)
C6: (-5.023,16.121,22.105)
C5: (-5.237,14.756,21.788)
C4: (-6.430,14.386,21.202)
P: (-3.175,8.815,20.678)
C4': (-6.801,9.985,19.774)
C2': (-7.425,12.114,19.000)
O2': (-8.733,11.773,18.583)
N1: (-6.113,16.906,21.745)
N2: (-8.209,17.353,20.899)
N3: (-7.477,15.169,20.856)
N7: (-4.418,13.652,21.980)
N9: (-6.356,13.021,21.058)
O5': (-4.533,9.626,20.489)
O3': (-6.594,10.473,17.407)
OP2: (-2.075,9.789,20.790)
C3': (-6.426,11.005,18.712)
C1': (-7.389,12.136,20.528)
C5': (-5.738,8.969,20.117)
O6: (-4.040,16.643,22.635)
O4': (-7.089,10.808,20.943)
C8: (-5.121,12.649,21.531)
C2: (-7.265,16.438,21.159)
C6: (-5.023,16.121,22.105)
C5: (-5.237,14.756,21.788)
C4: (-6.430,14.386,21.202)
P: (-3.175,8.815,20.678)
C4': (-6.801,9.985,19.774)
C2': (-7.425,12.114,19.000)
O2': (-8.733,11.773,18.583)
N1: (-6.113,16.906,21.745)
N2: (-8.209,17.353,20.899)
N3: (-7.477,15.169,20.856)
N7: (-4.418,13.652,21.980)
N9: (-6.356,13.021,21.058)
O5': (-4.533,9.626,20.489)
O3': (-6.594,10.473,17.407)
C4: (-1.746,13.197,26.391)
N3: (-3.075,13.238,26.017)
OP1: (1.091,6.351,24.547)
OP2: (1.599,8.731,25.344)
C2: (-3.846,12.181,25.603)
C1': (-3.991,9.789,25.185)
C3': (-3.056,8.741,23.294)
O5': (-0.724,7.994,25.036)
O4': (-3.319,8.620,25.613)
C5': (-1.740,7.056,24.715)
P: (0.753,7.520,25.394)
C4': (-3.042,7.773,24.470)
C2': (-4.186,9.688,23.675)
O2': (-5.466,9.156,23.417)
N1: (-3.204,10.960,25.590)
O4: (-1.178,14.241,26.707)
O2: (-5.012,12.319,25.264)
C6: (-1.879,10.849,25.950)
C5: (-1.148,11.897,26.334)
O3': (-3.349,8.057,22.085)
N3: (-3.075,13.238,26.017)
OP1: (1.091,6.351,24.547)
OP2: (1.599,8.731,25.344)
C2: (-3.846,12.181,25.603)
C1': (-3.991,9.789,25.185)
C3': (-3.056,8.741,23.294)
O5': (-0.724,7.994,25.036)
O4': (-3.319,8.620,25.613)
C5': (-1.740,7.056,24.715)
P: (0.753,7.520,25.394)
C4': (-3.042,7.773,24.470)
C2': (-4.186,9.688,23.675)
O2': (-5.466,9.156,23.417)
N1: (-3.204,10.960,25.590)
O4: (-1.178,14.241,26.707)
O2: (-5.012,12.319,25.264)
C6: (-1.879,10.849,25.950)
C5: (-1.148,11.897,26.334)
O3': (-3.349,8.057,22.085)
Image (generated by PyMOL):