ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A1022:A968

Extra

PDB:
ATOM 1 O3' A A1021 199.621 106.807 44.448 1.00107.44 O
ATOM 2 P C A1022 200.224 106.958 42.964 1.00106.86 P
ATOM 3 OP1 C A1022 199.139 106.552 42.017 1.00107.09 O
ATOM 4 OP2 C A1022 201.539 106.259 42.928 1.00105.82 O
ATOM 5 O5' C A1022 200.450 108.538 42.823 1.00105.14 O
ATOM 6 C5' C A1022 201.349 109.092 41.837 1.00102.83 C
ATOM 7 C4' C A1022 202.306 110.066 42.495 1.00100.89 C
ATOM 8 O4' C A1022 203.112 109.351 43.466 1.00100.59 O
ATOM 9 C3' C A1022 203.316 110.737 41.574 1.00 99.25 C
ATOM 10 O3' C A1022 202.783 111.923 40.996 1.00 97.37 O
ATOM 11 C2' C A1022 204.480 111.053 42.508 1.00 99.07 C
ATOM 12 O2' C A1022 204.317 112.267 43.214 1.00 98.13 O
ATOM 13 C1' C A1022 204.430 109.877 43.485 1.00 99.65 C
ATOM 14 N1 C A1022 205.371 108.784 43.163 1.00 99.75 N
ATOM 15 C2 C A1022 206.756 109.053 43.118 1.00 99.69 C
ATOM 16 O2 C A1022 207.163 110.208 43.348 1.00 98.89 O
ATOM 17 N3 C A1022 207.609 108.045 42.823 1.00 99.90 N
ATOM 18 C4 C A1022 207.136 106.819 42.576 1.00100.49 C
ATOM 19 N4 C A1022 208.011 105.857 42.278 1.00101.05 N
ATOM 20 C5 C A1022 205.744 106.522 42.619 1.00100.34 C
ATOM 21 C6 C A1022 204.908 107.522 42.911 1.00 99.96 C
ATOM 22 P A A1023 203.520 112.592 39.734 1.00 95.64 P
ATOM 23 OP1 A A1023 203.094 114.027 39.682 1.00 95.00 O
ATOM 24 OP2 A A1023 203.310 111.709 38.561 1.00 95.48 O
ATOM 25 O5' A A1023 205.049 112.553 40.149 1.00 93.41 O
TER

ATOM 1 O3' C B 967 214.885 119.501 43.175 1.00 86.53 O
ATOM 2 P A B 968 213.879 119.504 44.435 1.00 88.03 P
ATOM 3 OP1 A B 968 213.909 120.901 44.987 1.00 87.99 O
ATOM 4 OP2 A B 968 214.204 118.340 45.309 1.00 87.11 O
ATOM 5 O5' A B 968 212.442 119.258 43.784 1.00 87.13 O
ATOM 6 C5' A B 968 211.818 120.274 42.975 1.00 86.48 C
ATOM 7 C4' A B 968 210.327 120.063 42.931 1.00 85.60 C
ATOM 8 O4' A B 968 210.025 118.856 42.186 1.00 84.34 O
ATOM 9 C3' A B 968 209.660 119.855 44.279 1.00 86.22 C
ATOM 10 O3' A B 968 209.399 121.094 44.934 1.00 88.44 O
ATOM 11 C2' A B 968 208.396 119.078 43.912 1.00 84.66 C
ATOM 12 O2' A B 968 207.339 119.902 43.461 1.00 84.76 O
ATOM 13 C1' A B 968 208.885 118.225 42.742 1.00 82.27 C
ATOM 14 N9 A B 968 209.246 116.860 43.122 1.00 78.21 N
ATOM 15 C8 A B 968 210.496 116.348 43.374 1.00 77.19 C
ATOM 16 N7 A B 968 210.495 115.068 43.664 1.00 75.47 N
ATOM 17 C5 A B 968 209.153 114.714 43.604 1.00 74.43 C
ATOM 18 C6 A B 968 208.487 113.488 43.794 1.00 73.08 C
ATOM 19 N6 A B 968 209.109 112.340 44.082 1.00 72.07 N
ATOM 20 N1 A B 968 207.142 113.480 43.665 1.00 72.35 N
ATOM 21 C2 A B 968 206.520 114.627 43.358 1.00 72.49 C
ATOM 22 N3 A B 968 207.035 115.836 43.146 1.00 73.08 N
ATOM 23 C4 A B 968 208.372 115.812 43.284 1.00 75.46 C
ATOM 24 P U B 969 209.275 121.135 46.540 1.00 89.43 P
ATOM 25 OP1 U B 969 209.141 122.579 46.909 1.00 88.92 O
ATOM 26 OP2 U B 969 210.375 120.327 47.123 1.00 88.89 O
ATOM 27 O5' U B 969 207.879 120.402 46.820 1.00 90.31 O
TER

Atoms:
C2: (206.756,109.053,43.118)
OP1: (199.139,106.552,42.017)
OP2: (201.539,106.259,42.928)
C4: (207.136,106.819,42.576)
O5': (200.450,108.538,42.823)
C3': (203.316,110.737,41.574)
C1': (204.430,109.877,43.485)
O4': (203.112,109.351,43.466)
C5': (201.349,109.092,41.837)
P: (200.224,106.958,42.964)
O2: (207.163,110.208,43.348)
C4': (202.306,110.066,42.495)
C2': (204.480,111.053,42.508)
O2': (204.317,112.267,43.214)
N1: (205.371,108.784,43.163)
N3: (207.609,108.045,42.823)
N4: (208.011,105.857,42.278)
C6: (204.908,107.522,42.911)
C5: (205.744,106.522,42.619)
O3': (202.783,111.923,40.996)
OP1: (213.909,120.901,44.987)
OP2: (214.204,118.340,45.309)
C3': (209.660,119.855,44.279)
C1': (208.885,118.225,42.742)
C5': (211.818,120.274,42.975)
O4': (210.025,118.856,42.186)
C8: (210.496,116.348,43.374)
O2': (207.339,119.902,43.461)
C6: (208.487,113.488,43.794)
C5: (209.153,114.714,43.604)
C4: (208.372,115.812,43.284)
P: (213.879,119.504,44.435)
C4': (210.327,120.063,42.931)
C2': (208.396,119.078,43.912)
C2: (206.520,114.627,43.358)
N1: (207.142,113.480,43.665)
N3: (207.035,115.836,43.146)
N6: (209.109,112.340,44.082)
N7: (210.495,115.068,43.664)
N9: (209.246,116.860,43.122)
O5': (212.442,119.258,43.784)
O3': (209.399,121.094,44.934)
Image (generated by PyMOL):
PyMOL image
show in jmol