Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2340:A1076
Extra
PDB:
ATOM 1 O3' U A2339 -105.445 -51.578 -18.115 1.00 27.28 O
ATOM 2 P C A2340 -106.723 -51.430 -19.073 1.00 24.94 P
ATOM 3 OP1 C A2340 -106.236 -50.885 -20.378 1.00 57.13 O
ATOM 4 OP2 C A2340 -107.809 -50.729 -18.337 1.00 57.32 O
ATOM 5 O5' C A2340 -107.196 -52.934 -19.295 1.00 26.57 O
ATOM 6 C5' C A2340 -106.323 -53.877 -19.938 1.00 26.57 C
ATOM 7 C4' C A2340 -106.938 -55.255 -19.965 1.00 26.57 C
ATOM 8 O4' C A2340 -107.081 -55.763 -18.612 1.00 26.57 O
ATOM 9 C3' C A2340 -108.328 -55.384 -20.557 1.00 26.57 C
ATOM 10 O3' C A2340 -108.332 -55.424 -21.979 1.00 26.57 O
ATOM 11 C2' C A2340 -108.810 -56.689 -19.942 1.00 26.57 C
ATOM 12 O2' C A2340 -108.260 -57.811 -20.590 1.00 26.57 O
ATOM 13 C1' C A2340 -108.207 -56.615 -18.543 1.00 26.57 C
ATOM 14 N1 C A2340 -109.178 -56.071 -17.575 1.00 24.84 N
ATOM 15 C2 C A2340 -110.119 -56.936 -17.029 1.00 24.82 C
ATOM 16 O2 C A2340 -110.086 -58.126 -17.352 1.00 24.77 O
ATOM 17 N3 C A2340 -111.041 -56.461 -16.167 1.00 24.82 N
ATOM 18 C4 C A2340 -111.041 -55.171 -15.845 1.00 24.84 C
ATOM 19 N4 C A2340 -111.981 -54.734 -15.003 1.00 24.83 N
ATOM 20 C5 C A2340 -110.082 -54.264 -16.374 1.00 24.79 C
ATOM 21 C6 C A2340 -109.177 -54.751 -17.227 1.00 24.78 C
ATOM 22 P C A2341 -109.668 -54.996 -22.772 1.00 28.13 P
ATOM 23 OP1 C A2341 -109.373 -55.032 -24.243 1.00 17.39 O
ATOM 24 OP2 C A2341 -110.202 -53.751 -22.165 1.00 17.12 O
ATOM 25 O5' C A2341 -110.695 -56.153 -22.399 1.00 31.18 O
TER
ATOM 1 O3' A B1075 -111.000 -69.523 -22.082 1.00 1.62 O
ATOM 2 P A B1076 -109.804 -69.279 -23.118 1.00 62.11 P
ATOM 3 OP1 A B1076 -110.375 -68.848 -24.422 1.00 33.05 O
ATOM 4 OP2 A B1076 -108.890 -70.447 -23.065 1.00 32.89 O
ATOM 5 O5' A B1076 -109.062 -68.022 -22.495 1.00 40.56 O
ATOM 6 C5' A B1076 -108.339 -68.137 -21.261 1.00 40.56 C
ATOM 7 C4' A B1076 -107.046 -67.372 -21.356 1.00 40.56 C
ATOM 8 O4' A B1076 -107.337 -65.959 -21.479 1.00 40.56 O
ATOM 9 C3' A B1076 -106.113 -67.485 -20.164 1.00 40.56 C
ATOM 10 O3' A B1076 -105.281 -68.640 -20.315 1.00 40.56 O
ATOM 11 C2' A B1076 -105.313 -66.186 -20.243 1.00 40.56 C
ATOM 12 O2' A B1076 -104.244 -66.267 -21.168 1.00 40.56 O
ATOM 13 C1' A B1076 -106.345 -65.208 -20.812 1.00 40.56 C
ATOM 14 N9 A B1076 -107.015 -64.348 -19.838 1.00 25.74 N
ATOM 15 C8 A B1076 -107.452 -64.655 -18.575 1.00 25.51 C
ATOM 16 N7 A B1076 -108.083 -63.670 -17.983 1.00 25.46 N
ATOM 17 C5 A B1076 -108.045 -62.645 -18.912 1.00 25.51 C
ATOM 18 C6 A B1076 -108.550 -61.353 -18.894 1.00 25.53 C
ATOM 19 N6 A B1076 -109.226 -60.846 -17.874 1.00 25.58 N
ATOM 20 N1 A B1076 -108.340 -60.581 -19.975 1.00 25.48 N
ATOM 21 C2 A B1076 -107.667 -61.092 -21.004 1.00 25.42 C
ATOM 22 N3 A B1076 -107.147 -62.295 -21.144 1.00 25.45 N
ATOM 23 C4 A B1076 -107.375 -63.038 -20.048 1.00 25.59 C
ATOM 24 P A B1077 -104.672 -69.365 -19.016 1.00 34.75 P
ATOM 25 OP1 A B1077 -104.792 -70.824 -19.218 1.00 34.30 O
ATOM 26 OP2 A B1077 -105.234 -68.737 -17.781 1.00 34.16 O
ATOM 27 O5' A B1077 -103.125 -69.036 -19.088 1.00 69.25 O
TER
ATOM 2 P C A2340 -106.723 -51.430 -19.073 1.00 24.94 P
ATOM 3 OP1 C A2340 -106.236 -50.885 -20.378 1.00 57.13 O
ATOM 4 OP2 C A2340 -107.809 -50.729 -18.337 1.00 57.32 O
ATOM 5 O5' C A2340 -107.196 -52.934 -19.295 1.00 26.57 O
ATOM 6 C5' C A2340 -106.323 -53.877 -19.938 1.00 26.57 C
ATOM 7 C4' C A2340 -106.938 -55.255 -19.965 1.00 26.57 C
ATOM 8 O4' C A2340 -107.081 -55.763 -18.612 1.00 26.57 O
ATOM 9 C3' C A2340 -108.328 -55.384 -20.557 1.00 26.57 C
ATOM 10 O3' C A2340 -108.332 -55.424 -21.979 1.00 26.57 O
ATOM 11 C2' C A2340 -108.810 -56.689 -19.942 1.00 26.57 C
ATOM 12 O2' C A2340 -108.260 -57.811 -20.590 1.00 26.57 O
ATOM 13 C1' C A2340 -108.207 -56.615 -18.543 1.00 26.57 C
ATOM 14 N1 C A2340 -109.178 -56.071 -17.575 1.00 24.84 N
ATOM 15 C2 C A2340 -110.119 -56.936 -17.029 1.00 24.82 C
ATOM 16 O2 C A2340 -110.086 -58.126 -17.352 1.00 24.77 O
ATOM 17 N3 C A2340 -111.041 -56.461 -16.167 1.00 24.82 N
ATOM 18 C4 C A2340 -111.041 -55.171 -15.845 1.00 24.84 C
ATOM 19 N4 C A2340 -111.981 -54.734 -15.003 1.00 24.83 N
ATOM 20 C5 C A2340 -110.082 -54.264 -16.374 1.00 24.79 C
ATOM 21 C6 C A2340 -109.177 -54.751 -17.227 1.00 24.78 C
ATOM 22 P C A2341 -109.668 -54.996 -22.772 1.00 28.13 P
ATOM 23 OP1 C A2341 -109.373 -55.032 -24.243 1.00 17.39 O
ATOM 24 OP2 C A2341 -110.202 -53.751 -22.165 1.00 17.12 O
ATOM 25 O5' C A2341 -110.695 -56.153 -22.399 1.00 31.18 O
TER
ATOM 1 O3' A B1075 -111.000 -69.523 -22.082 1.00 1.62 O
ATOM 2 P A B1076 -109.804 -69.279 -23.118 1.00 62.11 P
ATOM 3 OP1 A B1076 -110.375 -68.848 -24.422 1.00 33.05 O
ATOM 4 OP2 A B1076 -108.890 -70.447 -23.065 1.00 32.89 O
ATOM 5 O5' A B1076 -109.062 -68.022 -22.495 1.00 40.56 O
ATOM 6 C5' A B1076 -108.339 -68.137 -21.261 1.00 40.56 C
ATOM 7 C4' A B1076 -107.046 -67.372 -21.356 1.00 40.56 C
ATOM 8 O4' A B1076 -107.337 -65.959 -21.479 1.00 40.56 O
ATOM 9 C3' A B1076 -106.113 -67.485 -20.164 1.00 40.56 C
ATOM 10 O3' A B1076 -105.281 -68.640 -20.315 1.00 40.56 O
ATOM 11 C2' A B1076 -105.313 -66.186 -20.243 1.00 40.56 C
ATOM 12 O2' A B1076 -104.244 -66.267 -21.168 1.00 40.56 O
ATOM 13 C1' A B1076 -106.345 -65.208 -20.812 1.00 40.56 C
ATOM 14 N9 A B1076 -107.015 -64.348 -19.838 1.00 25.74 N
ATOM 15 C8 A B1076 -107.452 -64.655 -18.575 1.00 25.51 C
ATOM 16 N7 A B1076 -108.083 -63.670 -17.983 1.00 25.46 N
ATOM 17 C5 A B1076 -108.045 -62.645 -18.912 1.00 25.51 C
ATOM 18 C6 A B1076 -108.550 -61.353 -18.894 1.00 25.53 C
ATOM 19 N6 A B1076 -109.226 -60.846 -17.874 1.00 25.58 N
ATOM 20 N1 A B1076 -108.340 -60.581 -19.975 1.00 25.48 N
ATOM 21 C2 A B1076 -107.667 -61.092 -21.004 1.00 25.42 C
ATOM 22 N3 A B1076 -107.147 -62.295 -21.144 1.00 25.45 N
ATOM 23 C4 A B1076 -107.375 -63.038 -20.048 1.00 25.59 C
ATOM 24 P A B1077 -104.672 -69.365 -19.016 1.00 34.75 P
ATOM 25 OP1 A B1077 -104.792 -70.824 -19.218 1.00 34.30 O
ATOM 26 OP2 A B1077 -105.234 -68.737 -17.781 1.00 34.16 O
ATOM 27 O5' A B1077 -103.125 -69.036 -19.088 1.00 69.25 O
TER
Atoms:
C2: (-110.119,-56.936,-17.029)
OP1: (-106.236,-50.885,-20.378)
OP2: (-107.809,-50.729,-18.337)
C4: (-111.041,-55.171,-15.845)
O5': (-107.196,-52.934,-19.295)
C3': (-108.328,-55.384,-20.557)
C1': (-108.207,-56.615,-18.543)
O4': (-107.081,-55.763,-18.612)
C5': (-106.323,-53.877,-19.938)
P: (-106.723,-51.430,-19.073)
O2: (-110.086,-58.126,-17.352)
C4': (-106.938,-55.255,-19.965)
C2': (-108.810,-56.689,-19.942)
O2': (-108.260,-57.811,-20.590)
N1: (-109.178,-56.071,-17.575)
N3: (-111.041,-56.461,-16.167)
N4: (-111.981,-54.734,-15.003)
C6: (-109.177,-54.751,-17.227)
C5: (-110.082,-54.264,-16.374)
O3': (-108.332,-55.424,-21.979)
OP1: (-106.236,-50.885,-20.378)
OP2: (-107.809,-50.729,-18.337)
C4: (-111.041,-55.171,-15.845)
O5': (-107.196,-52.934,-19.295)
C3': (-108.328,-55.384,-20.557)
C1': (-108.207,-56.615,-18.543)
O4': (-107.081,-55.763,-18.612)
C5': (-106.323,-53.877,-19.938)
P: (-106.723,-51.430,-19.073)
O2: (-110.086,-58.126,-17.352)
C4': (-106.938,-55.255,-19.965)
C2': (-108.810,-56.689,-19.942)
O2': (-108.260,-57.811,-20.590)
N1: (-109.178,-56.071,-17.575)
N3: (-111.041,-56.461,-16.167)
N4: (-111.981,-54.734,-15.003)
C6: (-109.177,-54.751,-17.227)
C5: (-110.082,-54.264,-16.374)
O3': (-108.332,-55.424,-21.979)
OP1: (-110.375,-68.848,-24.422)
OP2: (-108.890,-70.447,-23.065)
C3': (-106.113,-67.485,-20.164)
C1': (-106.345,-65.208,-20.812)
C5': (-108.339,-68.137,-21.261)
O4': (-107.337,-65.959,-21.479)
C8: (-107.452,-64.655,-18.575)
O2': (-104.244,-66.267,-21.168)
C6: (-108.550,-61.353,-18.894)
C5: (-108.045,-62.645,-18.912)
C4: (-107.375,-63.038,-20.048)
P: (-109.804,-69.279,-23.118)
C4': (-107.046,-67.372,-21.356)
C2': (-105.313,-66.186,-20.243)
C2: (-107.667,-61.092,-21.004)
N1: (-108.340,-60.581,-19.975)
N3: (-107.147,-62.295,-21.144)
N6: (-109.226,-60.846,-17.874)
N7: (-108.083,-63.670,-17.983)
N9: (-107.015,-64.348,-19.838)
O5': (-109.062,-68.022,-22.495)
O3': (-105.281,-68.640,-20.315)
OP2: (-108.890,-70.447,-23.065)
C3': (-106.113,-67.485,-20.164)
C1': (-106.345,-65.208,-20.812)
C5': (-108.339,-68.137,-21.261)
O4': (-107.337,-65.959,-21.479)
C8: (-107.452,-64.655,-18.575)
O2': (-104.244,-66.267,-21.168)
C6: (-108.550,-61.353,-18.894)
C5: (-108.045,-62.645,-18.912)
C4: (-107.375,-63.038,-20.048)
P: (-109.804,-69.279,-23.118)
C4': (-107.046,-67.372,-21.356)
C2': (-105.313,-66.186,-20.243)
C2: (-107.667,-61.092,-21.004)
N1: (-108.340,-60.581,-19.975)
N3: (-107.147,-62.295,-21.144)
N6: (-109.226,-60.846,-17.874)
N7: (-108.083,-63.670,-17.983)
N9: (-107.015,-64.348,-19.838)
O5': (-109.062,-68.022,-22.495)
O3': (-105.281,-68.640,-20.315)
Image (generated by PyMOL):