Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:026:0662
Extra
PDB:
ATOM 1 O3' U A 25 46.630 120.562 43.627 1.00 23.00 O
ATOM 2 P C A 26 47.288 120.417 42.172 1.00 24.22 P
ATOM 3 OP1 C A 26 48.248 119.276 42.196 1.00 21.87 O
ATOM 4 OP2 C A 26 47.748 121.762 41.770 1.00 23.59 O
ATOM 5 O5' C A 26 46.070 120.039 41.223 1.00 23.44 O
ATOM 6 C5' C A 26 45.408 118.779 41.345 1.00 23.34 C
ATOM 7 C4' C A 26 44.268 118.705 40.369 1.00 25.08 C
ATOM 8 O4' C A 26 43.338 119.784 40.644 1.00 26.05 O
ATOM 9 C3' C A 26 44.620 118.928 38.908 1.00 26.88 C
ATOM 10 O3' C A 26 45.145 117.773 38.287 1.00 28.23 O
ATOM 11 C2' C A 26 43.276 119.312 38.326 1.00 27.70 C
ATOM 12 O2' C A 26 42.415 118.199 38.214 1.00 29.55 O
ATOM 13 C1' C A 26 42.743 120.217 39.429 1.00 27.28 C
ATOM 14 N1 C A 26 43.108 121.622 39.193 1.00 27.60 N
ATOM 15 C2 C A 26 42.297 122.383 38.360 1.00 28.11 C
ATOM 16 O2 C A 26 41.322 121.844 37.819 1.00 27.99 O
ATOM 17 N3 C A 26 42.592 123.686 38.161 1.00 29.22 N
ATOM 18 C4 C A 26 43.655 124.228 38.755 1.00 27.98 C
ATOM 19 N4 C A 26 43.886 125.523 38.554 1.00 26.53 N
ATOM 20 C5 C A 26 44.519 123.467 39.587 1.00 27.81 C
ATOM 21 C6 C A 26 44.212 122.179 39.779 1.00 28.11 C
ATOM 22 P A A 27 46.208 117.940 37.101 1.00 29.12 P
ATOM 23 OP1 A A 27 46.725 116.583 36.797 1.00 27.48 O
ATOM 24 OP2 A A 27 47.153 119.014 37.487 1.00 28.40 O
ATOM 25 O5' A A 27 45.331 118.467 35.881 1.00 29.71 O
TER
ATOM 1 O3' U B 661 34.602 116.123 28.800 1.00 43.75 O
ATOM 2 P A B 662 34.858 116.752 30.266 1.00 42.80 P
ATOM 3 OP1 A B 662 33.578 117.171 30.892 1.00 42.26 O
ATOM 4 OP2 A B 662 35.960 117.732 30.127 1.00 42.12 O
ATOM 5 O5' A B 662 35.406 115.520 31.103 1.00 40.35 O
ATOM 6 C5' A B 662 36.263 114.551 30.488 1.00 39.65 C
ATOM 7 C4' A B 662 37.097 113.865 31.532 1.00 38.86 C
ATOM 8 O4' A B 662 37.969 114.855 32.134 1.00 38.42 O
ATOM 9 C3' A B 662 36.316 113.228 32.677 1.00 39.28 C
ATOM 10 O3' A B 662 36.978 112.052 33.110 1.00 39.42 O
ATOM 11 C2' A B 662 36.370 114.296 33.760 1.00 38.56 C
ATOM 12 O2' A B 662 36.314 113.757 35.061 1.00 39.19 O
ATOM 13 C1' A B 662 37.750 114.895 33.527 1.00 38.28 C
ATOM 14 N9 A B 662 37.859 116.282 33.979 1.00 37.41 N
ATOM 15 C8 A B 662 37.051 117.357 33.680 1.00 36.68 C
ATOM 16 N7 A B 662 37.406 118.466 34.278 1.00 35.64 N
ATOM 17 C5 A B 662 38.524 118.102 35.015 1.00 36.38 C
ATOM 18 C6 A B 662 39.366 118.824 35.874 1.00 37.00 C
ATOM 19 N6 A B 662 39.199 120.118 36.159 1.00 39.13 N
ATOM 20 N1 A B 662 40.397 118.163 36.442 1.00 36.24 N
ATOM 21 C2 A B 662 40.560 116.865 36.162 1.00 35.42 C
ATOM 22 N3 A B 662 39.836 116.077 35.381 1.00 35.20 N
ATOM 23 C4 A B 662 38.820 116.763 34.831 1.00 36.53 C
ATOM 24 P U B 663 36.337 110.622 32.776 1.00 40.04 P
ATOM 25 OP1 U B 663 37.129 109.578 33.482 1.00 39.77 O
ATOM 26 OP2 U B 663 36.181 110.550 31.301 1.00 40.25 O
ATOM 27 O5' U B 663 34.896 110.686 33.444 1.00 36.24 O
TER
ATOM 2 P C A 26 47.288 120.417 42.172 1.00 24.22 P
ATOM 3 OP1 C A 26 48.248 119.276 42.196 1.00 21.87 O
ATOM 4 OP2 C A 26 47.748 121.762 41.770 1.00 23.59 O
ATOM 5 O5' C A 26 46.070 120.039 41.223 1.00 23.44 O
ATOM 6 C5' C A 26 45.408 118.779 41.345 1.00 23.34 C
ATOM 7 C4' C A 26 44.268 118.705 40.369 1.00 25.08 C
ATOM 8 O4' C A 26 43.338 119.784 40.644 1.00 26.05 O
ATOM 9 C3' C A 26 44.620 118.928 38.908 1.00 26.88 C
ATOM 10 O3' C A 26 45.145 117.773 38.287 1.00 28.23 O
ATOM 11 C2' C A 26 43.276 119.312 38.326 1.00 27.70 C
ATOM 12 O2' C A 26 42.415 118.199 38.214 1.00 29.55 O
ATOM 13 C1' C A 26 42.743 120.217 39.429 1.00 27.28 C
ATOM 14 N1 C A 26 43.108 121.622 39.193 1.00 27.60 N
ATOM 15 C2 C A 26 42.297 122.383 38.360 1.00 28.11 C
ATOM 16 O2 C A 26 41.322 121.844 37.819 1.00 27.99 O
ATOM 17 N3 C A 26 42.592 123.686 38.161 1.00 29.22 N
ATOM 18 C4 C A 26 43.655 124.228 38.755 1.00 27.98 C
ATOM 19 N4 C A 26 43.886 125.523 38.554 1.00 26.53 N
ATOM 20 C5 C A 26 44.519 123.467 39.587 1.00 27.81 C
ATOM 21 C6 C A 26 44.212 122.179 39.779 1.00 28.11 C
ATOM 22 P A A 27 46.208 117.940 37.101 1.00 29.12 P
ATOM 23 OP1 A A 27 46.725 116.583 36.797 1.00 27.48 O
ATOM 24 OP2 A A 27 47.153 119.014 37.487 1.00 28.40 O
ATOM 25 O5' A A 27 45.331 118.467 35.881 1.00 29.71 O
TER
ATOM 1 O3' U B 661 34.602 116.123 28.800 1.00 43.75 O
ATOM 2 P A B 662 34.858 116.752 30.266 1.00 42.80 P
ATOM 3 OP1 A B 662 33.578 117.171 30.892 1.00 42.26 O
ATOM 4 OP2 A B 662 35.960 117.732 30.127 1.00 42.12 O
ATOM 5 O5' A B 662 35.406 115.520 31.103 1.00 40.35 O
ATOM 6 C5' A B 662 36.263 114.551 30.488 1.00 39.65 C
ATOM 7 C4' A B 662 37.097 113.865 31.532 1.00 38.86 C
ATOM 8 O4' A B 662 37.969 114.855 32.134 1.00 38.42 O
ATOM 9 C3' A B 662 36.316 113.228 32.677 1.00 39.28 C
ATOM 10 O3' A B 662 36.978 112.052 33.110 1.00 39.42 O
ATOM 11 C2' A B 662 36.370 114.296 33.760 1.00 38.56 C
ATOM 12 O2' A B 662 36.314 113.757 35.061 1.00 39.19 O
ATOM 13 C1' A B 662 37.750 114.895 33.527 1.00 38.28 C
ATOM 14 N9 A B 662 37.859 116.282 33.979 1.00 37.41 N
ATOM 15 C8 A B 662 37.051 117.357 33.680 1.00 36.68 C
ATOM 16 N7 A B 662 37.406 118.466 34.278 1.00 35.64 N
ATOM 17 C5 A B 662 38.524 118.102 35.015 1.00 36.38 C
ATOM 18 C6 A B 662 39.366 118.824 35.874 1.00 37.00 C
ATOM 19 N6 A B 662 39.199 120.118 36.159 1.00 39.13 N
ATOM 20 N1 A B 662 40.397 118.163 36.442 1.00 36.24 N
ATOM 21 C2 A B 662 40.560 116.865 36.162 1.00 35.42 C
ATOM 22 N3 A B 662 39.836 116.077 35.381 1.00 35.20 N
ATOM 23 C4 A B 662 38.820 116.763 34.831 1.00 36.53 C
ATOM 24 P U B 663 36.337 110.622 32.776 1.00 40.04 P
ATOM 25 OP1 U B 663 37.129 109.578 33.482 1.00 39.77 O
ATOM 26 OP2 U B 663 36.181 110.550 31.301 1.00 40.25 O
ATOM 27 O5' U B 663 34.896 110.686 33.444 1.00 36.24 O
TER
Atoms:
C2: (42.297,122.383,38.360)
OP1: (48.248,119.276,42.196)
OP2: (47.748,121.762,41.770)
C4: (43.655,124.228,38.755)
O5': (46.070,120.039,41.223)
C3': (44.620,118.928,38.908)
C1': (42.743,120.217,39.429)
O4': (43.338,119.784,40.644)
C5': (45.408,118.779,41.345)
P: (47.288,120.417,42.172)
O2: (41.322,121.844,37.819)
C4': (44.268,118.705,40.369)
C2': (43.276,119.312,38.326)
O2': (42.415,118.199,38.214)
N1: (43.108,121.622,39.193)
N3: (42.592,123.686,38.161)
N4: (43.886,125.523,38.554)
C6: (44.212,122.179,39.779)
C5: (44.519,123.467,39.587)
O3': (45.145,117.773,38.287)
OP1: (48.248,119.276,42.196)
OP2: (47.748,121.762,41.770)
C4: (43.655,124.228,38.755)
O5': (46.070,120.039,41.223)
C3': (44.620,118.928,38.908)
C1': (42.743,120.217,39.429)
O4': (43.338,119.784,40.644)
C5': (45.408,118.779,41.345)
P: (47.288,120.417,42.172)
O2: (41.322,121.844,37.819)
C4': (44.268,118.705,40.369)
C2': (43.276,119.312,38.326)
O2': (42.415,118.199,38.214)
N1: (43.108,121.622,39.193)
N3: (42.592,123.686,38.161)
N4: (43.886,125.523,38.554)
C6: (44.212,122.179,39.779)
C5: (44.519,123.467,39.587)
O3': (45.145,117.773,38.287)
OP1: (33.578,117.171,30.892)
OP2: (35.960,117.732,30.127)
C3': (36.316,113.228,32.677)
C1': (37.750,114.895,33.527)
C5': (36.263,114.551,30.488)
O4': (37.969,114.855,32.134)
C8: (37.051,117.357,33.680)
O2': (36.314,113.757,35.061)
C6: (39.366,118.824,35.874)
C5: (38.524,118.102,35.015)
C4: (38.820,116.763,34.831)
P: (34.858,116.752,30.266)
C4': (37.097,113.865,31.532)
C2': (36.370,114.296,33.760)
C2: (40.560,116.865,36.162)
N1: (40.397,118.163,36.442)
N3: (39.836,116.077,35.381)
N6: (39.199,120.118,36.159)
N7: (37.406,118.466,34.278)
N9: (37.859,116.282,33.979)
O5': (35.406,115.520,31.103)
O3': (36.978,112.052,33.110)
OP2: (35.960,117.732,30.127)
C3': (36.316,113.228,32.677)
C1': (37.750,114.895,33.527)
C5': (36.263,114.551,30.488)
O4': (37.969,114.855,32.134)
C8: (37.051,117.357,33.680)
O2': (36.314,113.757,35.061)
C6: (39.366,118.824,35.874)
C5: (38.524,118.102,35.015)
C4: (38.820,116.763,34.831)
P: (34.858,116.752,30.266)
C4': (37.097,113.865,31.532)
C2': (36.370,114.296,33.760)
C2: (40.560,116.865,36.162)
N1: (40.397,118.163,36.442)
N3: (39.836,116.077,35.381)
N6: (39.199,120.118,36.159)
N7: (37.406,118.466,34.278)
N9: (37.859,116.282,33.979)
O5': (35.406,115.520,31.103)
O3': (36.978,112.052,33.110)
Image (generated by PyMOL):