Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02073:01888
Extra
PDB:
ATOM 1 O3' C A2072 111.924 108.641 56.633 1.00 45.83 O
ATOM 2 P U A2073 112.397 108.498 55.103 1.00 46.53 P
ATOM 3 OP1 U A2073 113.874 108.687 55.098 1.00 48.03 O
ATOM 4 OP2 U A2073 111.545 109.367 54.246 1.00 45.96 O
ATOM 5 O5' U A2073 112.083 106.978 54.742 1.00 46.00 O
ATOM 6 C5' U A2073 112.781 105.907 55.399 1.00 47.60 C
ATOM 7 C4' U A2073 112.137 104.578 55.076 1.00 49.28 C
ATOM 8 O4' U A2073 110.775 104.572 55.580 1.00 49.17 O
ATOM 9 C3' U A2073 111.972 104.233 53.603 1.00 49.59 C
ATOM 10 O3' U A2073 113.164 103.733 53.002 1.00 50.55 O
ATOM 11 C2' U A2073 110.872 103.185 53.660 1.00 49.22 C
ATOM 12 O2' U A2073 111.333 101.929 54.108 1.00 51.75 O
ATOM 13 C1' U A2073 109.958 103.781 54.728 1.00 48.14 C
ATOM 14 N1 U A2073 108.925 104.635 54.119 1.00 46.31 N
ATOM 15 C2 U A2073 107.786 104.008 53.638 1.00 44.79 C
ATOM 16 O2 U A2073 107.591 102.812 53.749 1.00 42.36 O
ATOM 17 N3 U A2073 106.884 104.837 53.020 1.00 43.76 N
ATOM 18 C4 U A2073 106.993 106.200 52.845 1.00 44.22 C
ATOM 19 O4 U A2073 106.136 106.790 52.189 1.00 42.53 O
ATOM 20 C5 U A2073 108.180 106.783 53.400 1.00 44.26 C
ATOM 21 C6 U A2073 109.082 106.002 54.003 1.00 44.86 C
ATOM 22 P G A2074 113.419 103.963 51.427 1.00 52.28 P
ATOM 23 OP1 G A2074 114.887 103.904 51.216 1.00 50.86 O
ATOM 24 OP2 G A2074 112.670 105.170 50.994 1.00 52.13 O
ATOM 25 O5' G A2074 112.751 102.695 50.727 1.00 49.53 O
TER
ATOM 1 O3' G B1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 2 P A B1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 3 OP1 A B1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 4 OP2 A B1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 5 O5' A B1888 115.659 96.261 54.879 1.00 69.42 O
ATOM 6 C5' A B1888 116.083 97.280 53.951 1.00 64.33 C
ATOM 7 C4' A B1888 115.173 98.486 54.023 1.00 60.58 C
ATOM 8 O4' A B1888 113.916 98.220 53.354 1.00 60.58 O
ATOM 9 C3' A B1888 114.762 98.950 55.406 1.00 59.38 C
ATOM 10 O3' A B1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 11 C2' A B1888 113.526 99.786 55.098 1.00 59.09 C
ATOM 12 O2' A B1888 113.846 101.061 54.582 1.00 60.75 O
ATOM 13 C1' A B1888 112.885 98.969 53.975 1.00 59.78 C
ATOM 14 N9 A B1888 111.854 98.044 54.441 1.00 60.21 N
ATOM 15 C8 A B1888 111.984 96.716 54.770 1.00 60.93 C
ATOM 16 N7 A B1888 110.862 96.153 55.153 1.00 61.34 N
ATOM 17 C5 A B1888 109.932 97.179 55.074 1.00 60.52 C
ATOM 18 C6 A B1888 108.558 97.231 55.348 1.00 60.15 C
ATOM 19 N6 A B1888 107.849 96.188 55.789 1.00 59.20 N
ATOM 20 N1 A B1888 107.927 98.408 55.158 1.00 60.63 N
ATOM 21 C2 A B1888 108.638 99.457 54.728 1.00 59.81 C
ATOM 22 N3 A B1888 109.929 99.536 54.442 1.00 60.02 N
ATOM 23 C4 A B1888 110.529 98.349 54.637 1.00 60.55 C
ATOM 24 P A B1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 25 OP1 A B1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 26 OP2 A B1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 27 O5' A B1889 114.838 100.576 58.175 1.00 57.04 O
TER
ATOM 2 P U A2073 112.397 108.498 55.103 1.00 46.53 P
ATOM 3 OP1 U A2073 113.874 108.687 55.098 1.00 48.03 O
ATOM 4 OP2 U A2073 111.545 109.367 54.246 1.00 45.96 O
ATOM 5 O5' U A2073 112.083 106.978 54.742 1.00 46.00 O
ATOM 6 C5' U A2073 112.781 105.907 55.399 1.00 47.60 C
ATOM 7 C4' U A2073 112.137 104.578 55.076 1.00 49.28 C
ATOM 8 O4' U A2073 110.775 104.572 55.580 1.00 49.17 O
ATOM 9 C3' U A2073 111.972 104.233 53.603 1.00 49.59 C
ATOM 10 O3' U A2073 113.164 103.733 53.002 1.00 50.55 O
ATOM 11 C2' U A2073 110.872 103.185 53.660 1.00 49.22 C
ATOM 12 O2' U A2073 111.333 101.929 54.108 1.00 51.75 O
ATOM 13 C1' U A2073 109.958 103.781 54.728 1.00 48.14 C
ATOM 14 N1 U A2073 108.925 104.635 54.119 1.00 46.31 N
ATOM 15 C2 U A2073 107.786 104.008 53.638 1.00 44.79 C
ATOM 16 O2 U A2073 107.591 102.812 53.749 1.00 42.36 O
ATOM 17 N3 U A2073 106.884 104.837 53.020 1.00 43.76 N
ATOM 18 C4 U A2073 106.993 106.200 52.845 1.00 44.22 C
ATOM 19 O4 U A2073 106.136 106.790 52.189 1.00 42.53 O
ATOM 20 C5 U A2073 108.180 106.783 53.400 1.00 44.26 C
ATOM 21 C6 U A2073 109.082 106.002 54.003 1.00 44.86 C
ATOM 22 P G A2074 113.419 103.963 51.427 1.00 52.28 P
ATOM 23 OP1 G A2074 114.887 103.904 51.216 1.00 50.86 O
ATOM 24 OP2 G A2074 112.670 105.170 50.994 1.00 52.13 O
ATOM 25 O5' G A2074 112.751 102.695 50.727 1.00 49.53 O
TER
ATOM 1 O3' G B1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 2 P A B1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 3 OP1 A B1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 4 OP2 A B1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 5 O5' A B1888 115.659 96.261 54.879 1.00 69.42 O
ATOM 6 C5' A B1888 116.083 97.280 53.951 1.00 64.33 C
ATOM 7 C4' A B1888 115.173 98.486 54.023 1.00 60.58 C
ATOM 8 O4' A B1888 113.916 98.220 53.354 1.00 60.58 O
ATOM 9 C3' A B1888 114.762 98.950 55.406 1.00 59.38 C
ATOM 10 O3' A B1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 11 C2' A B1888 113.526 99.786 55.098 1.00 59.09 C
ATOM 12 O2' A B1888 113.846 101.061 54.582 1.00 60.75 O
ATOM 13 C1' A B1888 112.885 98.969 53.975 1.00 59.78 C
ATOM 14 N9 A B1888 111.854 98.044 54.441 1.00 60.21 N
ATOM 15 C8 A B1888 111.984 96.716 54.770 1.00 60.93 C
ATOM 16 N7 A B1888 110.862 96.153 55.153 1.00 61.34 N
ATOM 17 C5 A B1888 109.932 97.179 55.074 1.00 60.52 C
ATOM 18 C6 A B1888 108.558 97.231 55.348 1.00 60.15 C
ATOM 19 N6 A B1888 107.849 96.188 55.789 1.00 59.20 N
ATOM 20 N1 A B1888 107.927 98.408 55.158 1.00 60.63 N
ATOM 21 C2 A B1888 108.638 99.457 54.728 1.00 59.81 C
ATOM 22 N3 A B1888 109.929 99.536 54.442 1.00 60.02 N
ATOM 23 C4 A B1888 110.529 98.349 54.637 1.00 60.55 C
ATOM 24 P A B1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 25 OP1 A B1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 26 OP2 A B1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 27 O5' A B1889 114.838 100.576 58.175 1.00 57.04 O
TER
Atoms:
C4: (106.993,106.200,52.845)
N3: (106.884,104.837,53.020)
OP1: (113.874,108.687,55.098)
OP2: (111.545,109.367,54.246)
C2: (107.786,104.008,53.638)
C1': (109.958,103.781,54.728)
C3': (111.972,104.233,53.603)
O5': (112.083,106.978,54.742)
O4': (110.775,104.572,55.580)
C5': (112.781,105.907,55.399)
P: (112.397,108.498,55.103)
C4': (112.137,104.578,55.076)
C2': (110.872,103.185,53.660)
O2': (111.333,101.929,54.108)
N1: (108.925,104.635,54.119)
O4: (106.136,106.790,52.189)
O2: (107.591,102.812,53.749)
C6: (109.082,106.002,54.003)
C5: (108.180,106.783,53.400)
O3': (113.164,103.733,53.002)
N3: (106.884,104.837,53.020)
OP1: (113.874,108.687,55.098)
OP2: (111.545,109.367,54.246)
C2: (107.786,104.008,53.638)
C1': (109.958,103.781,54.728)
C3': (111.972,104.233,53.603)
O5': (112.083,106.978,54.742)
O4': (110.775,104.572,55.580)
C5': (112.781,105.907,55.399)
P: (112.397,108.498,55.103)
C4': (112.137,104.578,55.076)
C2': (110.872,103.185,53.660)
O2': (111.333,101.929,54.108)
N1: (108.925,104.635,54.119)
O4: (106.136,106.790,52.189)
O2: (107.591,102.812,53.749)
C6: (109.082,106.002,54.003)
C5: (108.180,106.783,53.400)
O3': (113.164,103.733,53.002)
OP1: (117.965,95.809,55.679)
OP2: (116.018,94.308,56.396)
C3': (114.762,98.950,55.406)
C1': (112.885,98.969,53.975)
C5': (116.083,97.280,53.951)
O4': (113.916,98.220,53.354)
C8: (111.984,96.716,54.770)
O2': (113.846,101.061,54.582)
C6: (108.558,97.231,55.348)
C5: (109.932,97.179,55.074)
C4: (110.529,98.349,54.637)
P: (116.679,95.135,55.360)
C4': (115.173,98.486,54.023)
C2': (113.526,99.786,55.098)
C2: (108.638,99.457,54.728)
N1: (107.927,98.408,55.158)
N3: (109.929,99.536,54.442)
N6: (107.849,96.188,55.789)
N7: (110.862,96.153,55.153)
N9: (111.854,98.044,54.441)
O5': (115.659,96.261,54.879)
O3': (115.797,99.704,56.018)
OP2: (116.018,94.308,56.396)
C3': (114.762,98.950,55.406)
C1': (112.885,98.969,53.975)
C5': (116.083,97.280,53.951)
O4': (113.916,98.220,53.354)
C8: (111.984,96.716,54.770)
O2': (113.846,101.061,54.582)
C6: (108.558,97.231,55.348)
C5: (109.932,97.179,55.074)
C4: (110.529,98.349,54.637)
P: (116.679,95.135,55.360)
C4': (115.173,98.486,54.023)
C2': (113.526,99.786,55.098)
C2: (108.638,99.457,54.728)
N1: (107.927,98.408,55.158)
N3: (109.929,99.536,54.442)
N6: (107.849,96.188,55.789)
N7: (110.862,96.153,55.153)
N9: (111.854,98.044,54.441)
O5': (115.659,96.261,54.879)
O3': (115.797,99.704,56.018)
Image (generated by PyMOL):