Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1380:A1471
Extra
PDB:
ATOM 1 O3' C A1379 -46.225 97.588 85.215 1.00 3.61 O
ATOM 2 P C A1380 -45.856 97.058 86.696 1.00 23.35 P
ATOM 3 OP1 C A1380 -44.850 95.975 86.543 1.00 24.63 O
ATOM 4 OP2 C A1380 -47.110 96.792 87.471 1.00 21.51 O
ATOM 5 O5' C A1380 -45.093 98.293 87.355 1.00 56.68 O
ATOM 6 C5' C A1380 -43.782 98.695 86.884 1.00 57.21 C
ATOM 7 C4' C A1380 -43.357 99.984 87.551 1.00 58.72 C
ATOM 8 O4' C A1380 -44.312 101.015 87.206 1.00 60.74 O
ATOM 9 C3' C A1380 -43.347 99.952 89.070 1.00 58.68 C
ATOM 10 O3' C A1380 -42.095 99.513 89.573 1.00 55.85 O
ATOM 11 C2' C A1380 -43.616 101.399 89.430 1.00 60.19 C
ATOM 12 O2' C A1380 -42.451 102.180 89.281 1.00 60.31 O
ATOM 13 C1' C A1380 -44.608 101.798 88.342 1.00 61.49 C
ATOM 14 N1 C A1380 -46.013 101.542 88.709 1.00 21.09 N
ATOM 15 C2 C A1380 -46.569 102.213 89.799 1.00 21.28 C
ATOM 16 O2 C A1380 -45.857 102.969 90.468 1.00 21.93 O
ATOM 17 N3 C A1380 -47.859 102.016 90.109 1.00 23.09 N
ATOM 18 C4 C A1380 -48.585 101.166 89.396 1.00 22.99 C
ATOM 19 N4 C A1380 -49.860 100.986 89.750 1.00 23.18 N
ATOM 20 C5 C A1380 -48.043 100.455 88.292 1.00 24.33 C
ATOM 21 C6 C A1380 -46.768 100.670 87.989 1.00 23.37 C
ATOM 22 P C A1381 -41.979 99.010 91.098 1.00 31.44 P
ATOM 23 OP1 C A1381 -40.966 97.934 91.088 1.00 29.43 O
ATOM 24 OP2 C A1381 -43.326 98.752 91.680 1.00 29.04 O
ATOM 25 O5' C A1381 -41.318 100.245 91.848 1.00 20.43 O
TER
ATOM 1 O3' U B1470 -45.149 113.132 91.602 1.00 1.36 O
ATOM 2 P A B1471 -44.156 112.524 90.515 1.00 41.91 P
ATOM 3 OP1 A B1471 -43.681 113.716 89.767 1.00 24.97 O
ATOM 4 OP2 A B1471 -44.726 111.393 89.769 1.00 29.36 O
ATOM 5 O5' A B1471 -42.970 111.983 91.426 1.00 11.29 O
ATOM 6 C5' A B1471 -41.756 112.742 91.598 1.00 11.29 C
ATOM 7 C4' A B1471 -40.548 111.845 91.407 1.00 11.29 C
ATOM 8 O4' A B1471 -40.603 110.776 92.387 1.00 11.29 O
ATOM 9 C3' A B1471 -40.488 111.129 90.063 1.00 11.29 C
ATOM 10 O3' A B1471 -39.884 111.903 89.026 1.00 11.29 O
ATOM 11 C2' A B1471 -39.714 109.867 90.391 1.00 11.29 C
ATOM 12 O2' A B1471 -38.323 110.082 90.469 1.00 11.29 O
ATOM 13 C1' A B1471 -40.247 109.549 91.781 1.00 11.29 C
ATOM 14 N9 A B1471 -41.456 108.735 91.692 1.00 11.74 N
ATOM 15 C8 A B1471 -42.717 109.099 92.073 1.00 11.74 C
ATOM 16 N7 A B1471 -43.621 108.171 91.875 1.00 11.74 N
ATOM 17 C5 A B1471 -42.905 107.123 91.326 1.00 11.74 C
ATOM 18 C6 A B1471 -43.291 105.857 90.897 1.00 11.74 C
ATOM 19 N6 A B1471 -44.543 105.422 90.962 1.00 11.74 N
ATOM 20 N1 A B1471 -42.339 105.043 90.395 1.00 11.74 N
ATOM 21 C2 A B1471 -41.082 105.492 90.333 1.00 11.74 C
ATOM 22 N3 A B1471 -40.591 106.669 90.707 1.00 11.74 N
ATOM 23 C4 A B1471 -41.568 107.452 91.205 1.00 11.74 C
ATOM 24 P A B1472 -40.593 111.959 87.583 1.00 16.13 P
ATOM 25 OP1 A B1472 -40.124 113.158 86.822 1.00 3.27 O
ATOM 26 OP2 A B1472 -42.058 111.759 87.837 1.00 6.70 O
ATOM 27 O5' A B1472 -40.038 110.662 86.849 1.00 18.87 O
TER
ATOM 2 P C A1380 -45.856 97.058 86.696 1.00 23.35 P
ATOM 3 OP1 C A1380 -44.850 95.975 86.543 1.00 24.63 O
ATOM 4 OP2 C A1380 -47.110 96.792 87.471 1.00 21.51 O
ATOM 5 O5' C A1380 -45.093 98.293 87.355 1.00 56.68 O
ATOM 6 C5' C A1380 -43.782 98.695 86.884 1.00 57.21 C
ATOM 7 C4' C A1380 -43.357 99.984 87.551 1.00 58.72 C
ATOM 8 O4' C A1380 -44.312 101.015 87.206 1.00 60.74 O
ATOM 9 C3' C A1380 -43.347 99.952 89.070 1.00 58.68 C
ATOM 10 O3' C A1380 -42.095 99.513 89.573 1.00 55.85 O
ATOM 11 C2' C A1380 -43.616 101.399 89.430 1.00 60.19 C
ATOM 12 O2' C A1380 -42.451 102.180 89.281 1.00 60.31 O
ATOM 13 C1' C A1380 -44.608 101.798 88.342 1.00 61.49 C
ATOM 14 N1 C A1380 -46.013 101.542 88.709 1.00 21.09 N
ATOM 15 C2 C A1380 -46.569 102.213 89.799 1.00 21.28 C
ATOM 16 O2 C A1380 -45.857 102.969 90.468 1.00 21.93 O
ATOM 17 N3 C A1380 -47.859 102.016 90.109 1.00 23.09 N
ATOM 18 C4 C A1380 -48.585 101.166 89.396 1.00 22.99 C
ATOM 19 N4 C A1380 -49.860 100.986 89.750 1.00 23.18 N
ATOM 20 C5 C A1380 -48.043 100.455 88.292 1.00 24.33 C
ATOM 21 C6 C A1380 -46.768 100.670 87.989 1.00 23.37 C
ATOM 22 P C A1381 -41.979 99.010 91.098 1.00 31.44 P
ATOM 23 OP1 C A1381 -40.966 97.934 91.088 1.00 29.43 O
ATOM 24 OP2 C A1381 -43.326 98.752 91.680 1.00 29.04 O
ATOM 25 O5' C A1381 -41.318 100.245 91.848 1.00 20.43 O
TER
ATOM 1 O3' U B1470 -45.149 113.132 91.602 1.00 1.36 O
ATOM 2 P A B1471 -44.156 112.524 90.515 1.00 41.91 P
ATOM 3 OP1 A B1471 -43.681 113.716 89.767 1.00 24.97 O
ATOM 4 OP2 A B1471 -44.726 111.393 89.769 1.00 29.36 O
ATOM 5 O5' A B1471 -42.970 111.983 91.426 1.00 11.29 O
ATOM 6 C5' A B1471 -41.756 112.742 91.598 1.00 11.29 C
ATOM 7 C4' A B1471 -40.548 111.845 91.407 1.00 11.29 C
ATOM 8 O4' A B1471 -40.603 110.776 92.387 1.00 11.29 O
ATOM 9 C3' A B1471 -40.488 111.129 90.063 1.00 11.29 C
ATOM 10 O3' A B1471 -39.884 111.903 89.026 1.00 11.29 O
ATOM 11 C2' A B1471 -39.714 109.867 90.391 1.00 11.29 C
ATOM 12 O2' A B1471 -38.323 110.082 90.469 1.00 11.29 O
ATOM 13 C1' A B1471 -40.247 109.549 91.781 1.00 11.29 C
ATOM 14 N9 A B1471 -41.456 108.735 91.692 1.00 11.74 N
ATOM 15 C8 A B1471 -42.717 109.099 92.073 1.00 11.74 C
ATOM 16 N7 A B1471 -43.621 108.171 91.875 1.00 11.74 N
ATOM 17 C5 A B1471 -42.905 107.123 91.326 1.00 11.74 C
ATOM 18 C6 A B1471 -43.291 105.857 90.897 1.00 11.74 C
ATOM 19 N6 A B1471 -44.543 105.422 90.962 1.00 11.74 N
ATOM 20 N1 A B1471 -42.339 105.043 90.395 1.00 11.74 N
ATOM 21 C2 A B1471 -41.082 105.492 90.333 1.00 11.74 C
ATOM 22 N3 A B1471 -40.591 106.669 90.707 1.00 11.74 N
ATOM 23 C4 A B1471 -41.568 107.452 91.205 1.00 11.74 C
ATOM 24 P A B1472 -40.593 111.959 87.583 1.00 16.13 P
ATOM 25 OP1 A B1472 -40.124 113.158 86.822 1.00 3.27 O
ATOM 26 OP2 A B1472 -42.058 111.759 87.837 1.00 6.70 O
ATOM 27 O5' A B1472 -40.038 110.662 86.849 1.00 18.87 O
TER
Atoms:
C2: (-46.569,102.213,89.799)
OP1: (-44.850,95.975,86.543)
OP2: (-47.110,96.792,87.471)
C4: (-48.585,101.166,89.396)
O5': (-45.093,98.293,87.355)
C3': (-43.347,99.952,89.070)
C1': (-44.608,101.798,88.342)
O4': (-44.312,101.015,87.206)
C5': (-43.782,98.695,86.884)
P: (-45.856,97.058,86.696)
O2: (-45.857,102.969,90.468)
C4': (-43.357,99.984,87.551)
C2': (-43.616,101.399,89.430)
O2': (-42.451,102.180,89.281)
N1: (-46.013,101.542,88.709)
N3: (-47.859,102.016,90.109)
N4: (-49.860,100.986,89.750)
C6: (-46.768,100.670,87.989)
C5: (-48.043,100.455,88.292)
O3': (-42.095,99.513,89.573)
OP1: (-44.850,95.975,86.543)
OP2: (-47.110,96.792,87.471)
C4: (-48.585,101.166,89.396)
O5': (-45.093,98.293,87.355)
C3': (-43.347,99.952,89.070)
C1': (-44.608,101.798,88.342)
O4': (-44.312,101.015,87.206)
C5': (-43.782,98.695,86.884)
P: (-45.856,97.058,86.696)
O2: (-45.857,102.969,90.468)
C4': (-43.357,99.984,87.551)
C2': (-43.616,101.399,89.430)
O2': (-42.451,102.180,89.281)
N1: (-46.013,101.542,88.709)
N3: (-47.859,102.016,90.109)
N4: (-49.860,100.986,89.750)
C6: (-46.768,100.670,87.989)
C5: (-48.043,100.455,88.292)
O3': (-42.095,99.513,89.573)
OP1: (-43.681,113.716,89.767)
OP2: (-44.726,111.393,89.769)
C3': (-40.488,111.129,90.063)
C1': (-40.247,109.549,91.781)
C5': (-41.756,112.742,91.598)
O4': (-40.603,110.776,92.387)
C8: (-42.717,109.099,92.073)
O2': (-38.323,110.082,90.469)
C6: (-43.291,105.857,90.897)
C5: (-42.905,107.123,91.326)
C4: (-41.568,107.452,91.205)
P: (-44.156,112.524,90.515)
C4': (-40.548,111.845,91.407)
C2': (-39.714,109.867,90.391)
C2: (-41.082,105.492,90.333)
N1: (-42.339,105.043,90.395)
N3: (-40.591,106.669,90.707)
N6: (-44.543,105.422,90.962)
N7: (-43.621,108.171,91.875)
N9: (-41.456,108.735,91.692)
O5': (-42.970,111.983,91.426)
O3': (-39.884,111.903,89.026)
OP2: (-44.726,111.393,89.769)
C3': (-40.488,111.129,90.063)
C1': (-40.247,109.549,91.781)
C5': (-41.756,112.742,91.598)
O4': (-40.603,110.776,92.387)
C8: (-42.717,109.099,92.073)
O2': (-38.323,110.082,90.469)
C6: (-43.291,105.857,90.897)
C5: (-42.905,107.123,91.326)
C4: (-41.568,107.452,91.205)
P: (-44.156,112.524,90.515)
C4': (-40.548,111.845,91.407)
C2': (-39.714,109.867,90.391)
C2: (-41.082,105.492,90.333)
N1: (-42.339,105.043,90.395)
N3: (-40.591,106.669,90.707)
N6: (-44.543,105.422,90.962)
N7: (-43.621,108.171,91.875)
N9: (-41.456,108.735,91.692)
O5': (-42.970,111.983,91.426)
O3': (-39.884,111.903,89.026)
Image (generated by PyMOL):