ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A948:A1334

Extra

PDB:
ATOM 1 O3' A A 947 -98.320 97.430 72.181 1.00 32.70 O
ATOM 2 P G A 948 -98.453 96.243 73.249 1.00 69.68 P
ATOM 3 OP1 G A 948 -97.099 95.668 73.406 1.00 60.93 O
ATOM 4 OP2 G A 948 -99.592 95.366 72.872 1.00 59.94 O
ATOM 5 O5' G A 948 -98.812 96.972 74.614 1.00 55.78 O
ATOM 6 C5' G A 948 -99.609 98.146 74.611 1.00 58.42 C
ATOM 7 C4' G A 948 -99.953 98.546 76.015 1.00 60.86 C
ATOM 8 O4' G A 948 -100.585 99.845 75.950 1.00 63.56 O
ATOM 9 C3' G A 948 -100.911 97.624 76.760 1.00 61.21 C
ATOM 10 O3' G A 948 -100.555 97.640 78.133 1.00 60.52 O
ATOM 11 C2' G A 948 -102.273 98.294 76.569 1.00 62.50 C
ATOM 12 O2' G A 948 -103.145 98.078 77.662 1.00 61.70 O
ATOM 13 C1' G A 948 -101.896 99.776 76.478 1.00 64.95 C
ATOM 14 N9 G A 948 -102.750 100.566 75.593 1.00 50.23 N
ATOM 15 C8 G A 948 -103.224 100.198 74.358 1.00 52.41 C
ATOM 16 N7 G A 948 -103.922 101.133 73.779 1.00 53.91 N
ATOM 17 C5 G A 948 -103.925 102.174 74.692 1.00 54.79 C
ATOM 18 C6 G A 948 -104.524 103.440 74.616 1.00 56.60 C
ATOM 19 O6 G A 948 -105.199 103.914 73.693 1.00 57.99 O
ATOM 20 N1 G A 948 -104.278 104.192 75.760 1.00 56.49 N
ATOM 21 C2 G A 948 -103.546 103.771 76.835 1.00 55.95 C
ATOM 22 N2 G A 948 -103.415 104.640 77.832 1.00 57.10 N
ATOM 23 N3 G A 948 -102.982 102.586 76.921 1.00 54.70 N
ATOM 24 C4 G A 948 -103.211 101.841 75.819 1.00 53.06 C
ATOM 25 P A A 949 -100.441 96.265 78.943 1.00 81.11 P
ATOM 26 OP1 A A 949 -99.183 95.610 78.513 1.00 67.32 O
ATOM 27 OP2 A A 949 -101.733 95.539 78.834 1.00 69.37 O
ATOM 28 O5' A A 949 -100.266 96.720 80.455 1.00 32.84 O
TER

ATOM 1 O3' A B1333 -101.846 98.191 65.761 1.00 39.85 O
ATOM 2 P U B1334 -103.047 97.244 66.238 1.00 43.01 P
ATOM 3 OP1 U B1334 -102.839 95.922 65.594 1.00 57.69 O
ATOM 4 OP2 U B1334 -104.323 97.975 66.030 1.00 57.79 O
ATOM 5 O5' U B1334 -102.816 97.063 67.798 1.00 41.94 O
ATOM 6 C5' U B1334 -101.624 96.456 68.304 1.00 41.75 C
ATOM 7 C4' U B1334 -101.383 96.916 69.717 1.00 41.51 C
ATOM 8 O4' U B1334 -101.084 98.328 69.713 1.00 40.96 O
ATOM 9 C3' U B1334 -102.584 96.783 70.647 1.00 40.98 C
ATOM 10 O3' U B1334 -102.573 95.487 71.266 1.00 41.03 O
ATOM 11 C2' U B1334 -102.345 97.868 71.701 1.00 40.79 C
ATOM 12 O2' U B1334 -101.684 97.392 72.853 1.00 41.36 O
ATOM 13 C1' U B1334 -101.441 98.870 70.968 1.00 41.23 C
ATOM 14 N1 U B1334 -102.013 100.216 70.794 1.00 78.00 N
ATOM 15 C2 U B1334 -101.710 101.173 71.757 1.00 78.63 C
ATOM 16 O2 U B1334 -100.942 100.969 72.685 1.00 77.45 O
ATOM 17 N3 U B1334 -102.336 102.380 71.592 1.00 78.70 N
ATOM 18 C4 U B1334 -103.198 102.733 70.582 1.00 79.46 C
ATOM 19 O4 U B1334 -103.744 103.838 70.611 1.00 81.68 O
ATOM 20 C5 U B1334 -103.422 101.712 69.605 1.00 78.40 C
ATOM 21 C6 U B1334 -102.838 100.520 69.741 1.00 78.29 C
ATOM 22 P C B1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 23 OP1 C B1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 24 OP2 C B1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 25 O5' C B1335 -105.019 95.097 71.713 1.00 38.96 O
TER

Atoms:
OP1: (-97.099,95.668,73.406)
OP2: (-99.592,95.366,72.872)
C3': (-100.911,97.624,76.760)
C1': (-101.896,99.776,76.478)
C5': (-99.609,98.146,74.611)
O6: (-105.199,103.914,73.693)
O4': (-100.585,99.845,75.950)
C8: (-103.224,100.198,74.358)
C2: (-103.546,103.771,76.835)
C6: (-104.524,103.440,74.616)
C5: (-103.925,102.174,74.692)
C4: (-103.211,101.841,75.819)
P: (-98.453,96.243,73.249)
C4': (-99.953,98.546,76.015)
C2': (-102.273,98.294,76.569)
O2': (-103.145,98.078,77.662)
N1: (-104.278,104.192,75.760)
N2: (-103.415,104.640,77.832)
N3: (-102.982,102.586,76.921)
N7: (-103.922,101.133,73.779)
N9: (-102.750,100.566,75.593)
O5': (-98.812,96.972,74.614)
O3': (-100.555,97.640,78.133)
C4: (-103.198,102.733,70.582)
N3: (-102.336,102.380,71.592)
OP1: (-102.839,95.922,65.594)
OP2: (-104.323,97.975,66.030)
C2: (-101.710,101.173,71.757)
C1': (-101.441,98.870,70.968)
C3': (-102.584,96.783,70.647)
O5': (-102.816,97.063,67.798)
O4': (-101.084,98.328,69.713)
C5': (-101.624,96.456,68.304)
P: (-103.047,97.244,66.238)
C4': (-101.383,96.916,69.717)
C2': (-102.345,97.868,71.701)
O2': (-101.684,97.392,72.853)
N1: (-102.013,100.216,70.794)
O4: (-103.744,103.838,70.611)
O2: (-100.942,100.969,72.685)
C6: (-102.838,100.520,69.741)
C5: (-103.422,101.712,69.605)
O3': (-102.573,95.487,71.266)
Image (generated by PyMOL):
PyMOL image
show in jmol