Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01042:01083
Extra
PDB:
ATOM 1 O3' A A1041 38.060 94.985 103.096 1.00 40.50 O
ATOM 2 P C A1042 38.898 94.010 104.068 1.00 42.52 P
ATOM 3 OP1 C A1042 40.348 94.368 103.988 1.00 41.31 O
ATOM 4 OP2 C A1042 38.474 92.613 103.778 1.00 44.76 O
ATOM 5 O5' C A1042 38.379 94.359 105.535 1.00 40.32 O
ATOM 6 C5' C A1042 38.833 93.592 106.670 1.00 35.21 C
ATOM 7 C4' C A1042 37.888 93.765 107.827 1.00 34.04 C
ATOM 8 O4' C A1042 37.929 95.135 108.304 1.00 32.49 O
ATOM 9 C3' C A1042 36.423 93.543 107.502 1.00 33.41 C
ATOM 10 O3' C A1042 36.100 92.162 107.478 1.00 36.31 O
ATOM 11 C2' C A1042 35.743 94.288 108.641 1.00 33.45 C
ATOM 12 O2' C A1042 35.827 93.563 109.852 1.00 32.31 O
ATOM 13 C1' C A1042 36.634 95.527 108.748 1.00 31.19 C
ATOM 14 N1 C A1042 36.158 96.643 107.901 1.00 30.82 N
ATOM 15 C2 C A1042 35.004 97.327 108.282 1.00 29.40 C
ATOM 16 O2 C A1042 34.405 96.967 109.301 1.00 33.06 O
ATOM 17 N3 C A1042 34.565 98.360 107.529 1.00 28.27 N
ATOM 18 C4 C A1042 35.225 98.709 106.421 1.00 29.05 C
ATOM 19 N4 C A1042 34.744 99.738 105.701 1.00 28.18 N
ATOM 20 C5 C A1042 36.399 98.024 105.999 1.00 27.80 C
ATOM 21 C6 C A1042 36.828 97.007 106.761 1.00 29.86 C
ATOM 22 P C A1043 34.742 91.682 106.768 1.00 38.75 P
ATOM 23 OP1 C A1043 34.667 90.205 106.901 1.00 40.11 O
ATOM 24 OP2 C A1043 34.641 92.305 105.421 1.00 39.02 O
ATOM 25 O5' C A1043 33.608 92.333 107.673 1.00 36.42 O
TER
ATOM 1 O3' A B1082 35.983 99.220 120.760 1.00 51.60 O
ATOM 2 P A B1083 34.733 98.533 120.002 1.00 54.13 P
ATOM 3 OP1 A B1083 34.913 98.863 118.559 1.00 54.35 O
ATOM 4 OP2 A B1083 33.442 98.863 120.679 1.00 54.32 O
ATOM 5 O5' A B1083 34.996 96.979 120.198 1.00 49.43 O
ATOM 6 C5' A B1083 36.215 96.409 119.751 1.00 44.22 C
ATOM 7 C4' A B1083 35.993 95.000 119.297 1.00 41.38 C
ATOM 8 O4' A B1083 34.761 94.898 118.542 1.00 40.25 O
ATOM 9 C3' A B1083 37.066 94.559 118.333 1.00 40.62 C
ATOM 10 O3' A B1083 38.204 94.137 119.044 1.00 39.99 O
ATOM 11 C2' A B1083 36.363 93.479 117.533 1.00 39.29 C
ATOM 12 O2' A B1083 36.240 92.281 118.264 1.00 40.38 O
ATOM 13 C1' A B1083 34.980 94.110 117.377 1.00 38.52 C
ATOM 14 N9 A B1083 34.873 95.000 116.215 1.00 35.22 N
ATOM 15 C8 A B1083 34.497 96.328 116.218 1.00 34.13 C
ATOM 16 N7 A B1083 34.440 96.865 115.025 1.00 33.12 N
ATOM 17 C5 A B1083 34.805 95.828 114.177 1.00 31.26 C
ATOM 18 C6 A B1083 34.916 95.753 112.781 1.00 29.61 C
ATOM 19 N6 A B1083 34.625 96.766 111.963 1.00 27.71 N
ATOM 20 N1 A B1083 35.332 94.583 112.245 1.00 30.06 N
ATOM 21 C2 A B1083 35.595 93.553 113.073 1.00 31.05 C
ATOM 22 N3 A B1083 35.503 93.497 114.404 1.00 31.48 N
ATOM 23 C4 A B1083 35.098 94.681 114.898 1.00 31.85 C
ATOM 24 P U B1084 39.568 94.943 118.867 1.00 38.29 P
ATOM 25 OP1 U B1084 40.579 94.305 119.763 1.00 37.42 O
ATOM 26 OP2 U B1084 39.246 96.382 119.023 1.00 35.29 O
ATOM 27 O5' U B1084 39.956 94.658 117.346 1.00 38.45 O
TER
ATOM 2 P C A1042 38.898 94.010 104.068 1.00 42.52 P
ATOM 3 OP1 C A1042 40.348 94.368 103.988 1.00 41.31 O
ATOM 4 OP2 C A1042 38.474 92.613 103.778 1.00 44.76 O
ATOM 5 O5' C A1042 38.379 94.359 105.535 1.00 40.32 O
ATOM 6 C5' C A1042 38.833 93.592 106.670 1.00 35.21 C
ATOM 7 C4' C A1042 37.888 93.765 107.827 1.00 34.04 C
ATOM 8 O4' C A1042 37.929 95.135 108.304 1.00 32.49 O
ATOM 9 C3' C A1042 36.423 93.543 107.502 1.00 33.41 C
ATOM 10 O3' C A1042 36.100 92.162 107.478 1.00 36.31 O
ATOM 11 C2' C A1042 35.743 94.288 108.641 1.00 33.45 C
ATOM 12 O2' C A1042 35.827 93.563 109.852 1.00 32.31 O
ATOM 13 C1' C A1042 36.634 95.527 108.748 1.00 31.19 C
ATOM 14 N1 C A1042 36.158 96.643 107.901 1.00 30.82 N
ATOM 15 C2 C A1042 35.004 97.327 108.282 1.00 29.40 C
ATOM 16 O2 C A1042 34.405 96.967 109.301 1.00 33.06 O
ATOM 17 N3 C A1042 34.565 98.360 107.529 1.00 28.27 N
ATOM 18 C4 C A1042 35.225 98.709 106.421 1.00 29.05 C
ATOM 19 N4 C A1042 34.744 99.738 105.701 1.00 28.18 N
ATOM 20 C5 C A1042 36.399 98.024 105.999 1.00 27.80 C
ATOM 21 C6 C A1042 36.828 97.007 106.761 1.00 29.86 C
ATOM 22 P C A1043 34.742 91.682 106.768 1.00 38.75 P
ATOM 23 OP1 C A1043 34.667 90.205 106.901 1.00 40.11 O
ATOM 24 OP2 C A1043 34.641 92.305 105.421 1.00 39.02 O
ATOM 25 O5' C A1043 33.608 92.333 107.673 1.00 36.42 O
TER
ATOM 1 O3' A B1082 35.983 99.220 120.760 1.00 51.60 O
ATOM 2 P A B1083 34.733 98.533 120.002 1.00 54.13 P
ATOM 3 OP1 A B1083 34.913 98.863 118.559 1.00 54.35 O
ATOM 4 OP2 A B1083 33.442 98.863 120.679 1.00 54.32 O
ATOM 5 O5' A B1083 34.996 96.979 120.198 1.00 49.43 O
ATOM 6 C5' A B1083 36.215 96.409 119.751 1.00 44.22 C
ATOM 7 C4' A B1083 35.993 95.000 119.297 1.00 41.38 C
ATOM 8 O4' A B1083 34.761 94.898 118.542 1.00 40.25 O
ATOM 9 C3' A B1083 37.066 94.559 118.333 1.00 40.62 C
ATOM 10 O3' A B1083 38.204 94.137 119.044 1.00 39.99 O
ATOM 11 C2' A B1083 36.363 93.479 117.533 1.00 39.29 C
ATOM 12 O2' A B1083 36.240 92.281 118.264 1.00 40.38 O
ATOM 13 C1' A B1083 34.980 94.110 117.377 1.00 38.52 C
ATOM 14 N9 A B1083 34.873 95.000 116.215 1.00 35.22 N
ATOM 15 C8 A B1083 34.497 96.328 116.218 1.00 34.13 C
ATOM 16 N7 A B1083 34.440 96.865 115.025 1.00 33.12 N
ATOM 17 C5 A B1083 34.805 95.828 114.177 1.00 31.26 C
ATOM 18 C6 A B1083 34.916 95.753 112.781 1.00 29.61 C
ATOM 19 N6 A B1083 34.625 96.766 111.963 1.00 27.71 N
ATOM 20 N1 A B1083 35.332 94.583 112.245 1.00 30.06 N
ATOM 21 C2 A B1083 35.595 93.553 113.073 1.00 31.05 C
ATOM 22 N3 A B1083 35.503 93.497 114.404 1.00 31.48 N
ATOM 23 C4 A B1083 35.098 94.681 114.898 1.00 31.85 C
ATOM 24 P U B1084 39.568 94.943 118.867 1.00 38.29 P
ATOM 25 OP1 U B1084 40.579 94.305 119.763 1.00 37.42 O
ATOM 26 OP2 U B1084 39.246 96.382 119.023 1.00 35.29 O
ATOM 27 O5' U B1084 39.956 94.658 117.346 1.00 38.45 O
TER
Atoms:
C2: (35.004,97.327,108.282)
OP1: (40.348,94.368,103.988)
OP2: (38.474,92.613,103.778)
C4: (35.225,98.709,106.421)
O5': (38.379,94.359,105.535)
C3': (36.423,93.543,107.502)
C1': (36.634,95.527,108.748)
O4': (37.929,95.135,108.304)
C5': (38.833,93.592,106.670)
P: (38.898,94.010,104.068)
O2: (34.405,96.967,109.301)
C4': (37.888,93.765,107.827)
C2': (35.743,94.288,108.641)
O2': (35.827,93.563,109.852)
N1: (36.158,96.643,107.901)
N3: (34.565,98.360,107.529)
N4: (34.744,99.738,105.701)
C6: (36.828,97.007,106.761)
C5: (36.399,98.024,105.999)
O3': (36.100,92.162,107.478)
OP1: (40.348,94.368,103.988)
OP2: (38.474,92.613,103.778)
C4: (35.225,98.709,106.421)
O5': (38.379,94.359,105.535)
C3': (36.423,93.543,107.502)
C1': (36.634,95.527,108.748)
O4': (37.929,95.135,108.304)
C5': (38.833,93.592,106.670)
P: (38.898,94.010,104.068)
O2: (34.405,96.967,109.301)
C4': (37.888,93.765,107.827)
C2': (35.743,94.288,108.641)
O2': (35.827,93.563,109.852)
N1: (36.158,96.643,107.901)
N3: (34.565,98.360,107.529)
N4: (34.744,99.738,105.701)
C6: (36.828,97.007,106.761)
C5: (36.399,98.024,105.999)
O3': (36.100,92.162,107.478)
OP1: (34.913,98.863,118.559)
OP2: (33.442,98.863,120.679)
C3': (37.066,94.559,118.333)
C1': (34.980,94.110,117.377)
C5': (36.215,96.409,119.751)
O4': (34.761,94.898,118.542)
C8: (34.497,96.328,116.218)
O2': (36.240,92.281,118.264)
C6: (34.916,95.753,112.781)
C5: (34.805,95.828,114.177)
C4: (35.098,94.681,114.898)
P: (34.733,98.533,120.002)
C4': (35.993,95.000,119.297)
C2': (36.363,93.479,117.533)
C2: (35.595,93.553,113.073)
N1: (35.332,94.583,112.245)
N3: (35.503,93.497,114.404)
N6: (34.625,96.766,111.963)
N7: (34.440,96.865,115.025)
N9: (34.873,95.000,116.215)
O5': (34.996,96.979,120.198)
O3': (38.204,94.137,119.044)
OP2: (33.442,98.863,120.679)
C3': (37.066,94.559,118.333)
C1': (34.980,94.110,117.377)
C5': (36.215,96.409,119.751)
O4': (34.761,94.898,118.542)
C8: (34.497,96.328,116.218)
O2': (36.240,92.281,118.264)
C6: (34.916,95.753,112.781)
C5: (34.805,95.828,114.177)
C4: (35.098,94.681,114.898)
P: (34.733,98.533,120.002)
C4': (35.993,95.000,119.297)
C2': (36.363,93.479,117.533)
C2: (35.595,93.553,113.073)
N1: (35.332,94.583,112.245)
N3: (35.503,93.497,114.404)
N6: (34.625,96.766,111.963)
N7: (34.440,96.865,115.025)
N9: (34.873,95.000,116.215)
O5': (34.996,96.979,120.198)
O3': (38.204,94.137,119.044)
Image (generated by PyMOL):