Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02034:02679
Extra
PDB:
ATOM 1 O3' C A2033 39.282 150.233 103.458 1.00 40.87 O
ATOM 2 P C A2034 40.862 149.990 103.550 1.00 41.44 P
ATOM 3 OP1 C A2034 41.456 150.406 102.268 1.00 41.64 O
ATOM 4 OP2 C A2034 41.098 148.615 104.065 1.00 40.48 O
ATOM 5 O5' C A2034 41.336 151.009 104.667 1.00 38.88 O
ATOM 6 C5' C A2034 41.354 152.410 104.424 1.00 38.51 C
ATOM 7 C4' C A2034 42.148 153.085 105.501 1.00 40.09 C
ATOM 8 O4' C A2034 41.525 152.807 106.781 1.00 40.87 O
ATOM 9 C3' C A2034 43.554 152.548 105.674 1.00 39.32 C
ATOM 10 O3' C A2034 44.447 153.141 104.753 1.00 39.65 O
ATOM 11 C2' C A2034 43.872 152.939 107.103 1.00 40.16 C
ATOM 12 O2' C A2034 44.169 154.316 107.200 1.00 38.93 O
ATOM 13 C1' C A2034 42.525 152.681 107.783 1.00 40.63 C
ATOM 14 N1 C A2034 42.393 151.356 108.430 1.00 38.26 N
ATOM 15 C2 C A2034 43.095 151.098 109.611 1.00 37.06 C
ATOM 16 O2 C A2034 43.843 151.967 110.066 1.00 37.92 O
ATOM 17 N3 C A2034 42.949 149.904 110.221 1.00 36.61 N
ATOM 18 C4 C A2034 42.159 148.976 109.686 1.00 37.54 C
ATOM 19 N4 C A2034 42.045 147.800 110.311 1.00 34.46 N
ATOM 20 C5 C A2034 41.446 149.207 108.481 1.00 39.92 C
ATOM 21 C6 C A2034 41.588 150.398 107.893 1.00 39.16 C
ATOM 22 P A A2035 45.708 152.303 104.239 1.00 41.12 P
ATOM 23 OP1 A A2035 46.391 153.118 103.213 1.00 41.46 O
ATOM 24 OP2 A A2035 45.250 150.936 103.913 1.00 40.50 O
ATOM 25 O5' A A2035 46.663 152.239 105.504 1.00 42.98 O
TER
ATOM 1 O3' C B2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 2 P A B2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 3 OP1 A B2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 4 OP2 A B2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 5 O5' A B2679 48.833 159.642 114.163 1.00 47.18 O
ATOM 6 C5' A B2679 49.518 160.761 113.575 1.00 43.17 C
ATOM 7 C4' A B2679 49.476 160.685 112.061 1.00 41.91 C
ATOM 8 O4' A B2679 50.058 159.429 111.621 1.00 42.43 O
ATOM 9 C3' A B2679 48.118 160.688 111.386 1.00 41.80 C
ATOM 10 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 11 C2' A B2679 48.464 160.115 110.026 1.00 41.34 C
ATOM 12 O2' A B2679 49.115 161.046 109.187 1.00 44.62 O
ATOM 13 C1' A B2679 49.429 159.001 110.426 1.00 39.59 C
ATOM 14 N9 A B2679 48.663 157.795 110.725 1.00 37.05 N
ATOM 15 C8 A B2679 48.601 157.085 111.892 1.00 36.87 C
ATOM 16 N7 A B2679 47.737 156.103 111.866 1.00 36.73 N
ATOM 17 C5 A B2679 47.211 156.158 110.588 1.00 37.22 C
ATOM 18 C6 A B2679 46.235 155.396 109.938 1.00 39.18 C
ATOM 19 N6 A B2679 45.565 154.398 110.521 1.00 40.27 N
ATOM 20 N1 A B2679 45.956 155.702 108.650 1.00 40.29 N
ATOM 21 C2 A B2679 46.614 156.717 108.072 1.00 38.91 C
ATOM 22 N3 A B2679 47.538 157.512 108.586 1.00 37.64 N
ATOM 23 C4 A B2679 47.792 157.177 109.864 1.00 37.50 C
ATOM 24 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 25 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 26 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 27 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
TER
ATOM 2 P C A2034 40.862 149.990 103.550 1.00 41.44 P
ATOM 3 OP1 C A2034 41.456 150.406 102.268 1.00 41.64 O
ATOM 4 OP2 C A2034 41.098 148.615 104.065 1.00 40.48 O
ATOM 5 O5' C A2034 41.336 151.009 104.667 1.00 38.88 O
ATOM 6 C5' C A2034 41.354 152.410 104.424 1.00 38.51 C
ATOM 7 C4' C A2034 42.148 153.085 105.501 1.00 40.09 C
ATOM 8 O4' C A2034 41.525 152.807 106.781 1.00 40.87 O
ATOM 9 C3' C A2034 43.554 152.548 105.674 1.00 39.32 C
ATOM 10 O3' C A2034 44.447 153.141 104.753 1.00 39.65 O
ATOM 11 C2' C A2034 43.872 152.939 107.103 1.00 40.16 C
ATOM 12 O2' C A2034 44.169 154.316 107.200 1.00 38.93 O
ATOM 13 C1' C A2034 42.525 152.681 107.783 1.00 40.63 C
ATOM 14 N1 C A2034 42.393 151.356 108.430 1.00 38.26 N
ATOM 15 C2 C A2034 43.095 151.098 109.611 1.00 37.06 C
ATOM 16 O2 C A2034 43.843 151.967 110.066 1.00 37.92 O
ATOM 17 N3 C A2034 42.949 149.904 110.221 1.00 36.61 N
ATOM 18 C4 C A2034 42.159 148.976 109.686 1.00 37.54 C
ATOM 19 N4 C A2034 42.045 147.800 110.311 1.00 34.46 N
ATOM 20 C5 C A2034 41.446 149.207 108.481 1.00 39.92 C
ATOM 21 C6 C A2034 41.588 150.398 107.893 1.00 39.16 C
ATOM 22 P A A2035 45.708 152.303 104.239 1.00 41.12 P
ATOM 23 OP1 A A2035 46.391 153.118 103.213 1.00 41.46 O
ATOM 24 OP2 A A2035 45.250 150.936 103.913 1.00 40.50 O
ATOM 25 O5' A A2035 46.663 152.239 105.504 1.00 42.98 O
TER
ATOM 1 O3' C B2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 2 P A B2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 3 OP1 A B2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 4 OP2 A B2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 5 O5' A B2679 48.833 159.642 114.163 1.00 47.18 O
ATOM 6 C5' A B2679 49.518 160.761 113.575 1.00 43.17 C
ATOM 7 C4' A B2679 49.476 160.685 112.061 1.00 41.91 C
ATOM 8 O4' A B2679 50.058 159.429 111.621 1.00 42.43 O
ATOM 9 C3' A B2679 48.118 160.688 111.386 1.00 41.80 C
ATOM 10 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 11 C2' A B2679 48.464 160.115 110.026 1.00 41.34 C
ATOM 12 O2' A B2679 49.115 161.046 109.187 1.00 44.62 O
ATOM 13 C1' A B2679 49.429 159.001 110.426 1.00 39.59 C
ATOM 14 N9 A B2679 48.663 157.795 110.725 1.00 37.05 N
ATOM 15 C8 A B2679 48.601 157.085 111.892 1.00 36.87 C
ATOM 16 N7 A B2679 47.737 156.103 111.866 1.00 36.73 N
ATOM 17 C5 A B2679 47.211 156.158 110.588 1.00 37.22 C
ATOM 18 C6 A B2679 46.235 155.396 109.938 1.00 39.18 C
ATOM 19 N6 A B2679 45.565 154.398 110.521 1.00 40.27 N
ATOM 20 N1 A B2679 45.956 155.702 108.650 1.00 40.29 N
ATOM 21 C2 A B2679 46.614 156.717 108.072 1.00 38.91 C
ATOM 22 N3 A B2679 47.538 157.512 108.586 1.00 37.64 N
ATOM 23 C4 A B2679 47.792 157.177 109.864 1.00 37.50 C
ATOM 24 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 25 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 26 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 27 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
TER
Atoms:
C2: (43.095,151.098,109.611)
OP1: (41.456,150.406,102.268)
OP2: (41.098,148.615,104.065)
C4: (42.159,148.976,109.686)
O5': (41.336,151.009,104.667)
C3': (43.554,152.548,105.674)
C1': (42.525,152.681,107.783)
O4': (41.525,152.807,106.781)
C5': (41.354,152.410,104.424)
P: (40.862,149.990,103.550)
O2: (43.843,151.967,110.066)
C4': (42.148,153.085,105.501)
C2': (43.872,152.939,107.103)
O2': (44.169,154.316,107.200)
N1: (42.393,151.356,108.430)
N3: (42.949,149.904,110.221)
N4: (42.045,147.800,110.311)
C6: (41.588,150.398,107.893)
C5: (41.446,149.207,108.481)
O3': (44.447,153.141,104.753)
OP1: (41.456,150.406,102.268)
OP2: (41.098,148.615,104.065)
C4: (42.159,148.976,109.686)
O5': (41.336,151.009,104.667)
C3': (43.554,152.548,105.674)
C1': (42.525,152.681,107.783)
O4': (41.525,152.807,106.781)
C5': (41.354,152.410,104.424)
P: (40.862,149.990,103.550)
O2: (43.843,151.967,110.066)
C4': (42.148,153.085,105.501)
C2': (43.872,152.939,107.103)
O2': (44.169,154.316,107.200)
N1: (42.393,151.356,108.430)
N3: (42.949,149.904,110.221)
N4: (42.045,147.800,110.311)
C6: (41.588,150.398,107.893)
C5: (41.446,149.207,108.481)
O3': (44.447,153.141,104.753)
OP1: (49.363,157.694,115.607)
OP2: (50.219,160.028,116.221)
C3': (48.118,160.688,111.386)
C1': (49.429,159.001,110.426)
C5': (49.518,160.761,113.575)
O4': (50.058,159.429,111.621)
C8: (48.601,157.085,111.892)
O2': (49.115,161.046,109.187)
C6: (46.235,155.396,109.938)
C5: (47.211,156.158,110.588)
C4: (47.792,157.177,109.864)
P: (49.158,159.162,115.652)
C4': (49.476,160.685,112.061)
C2': (48.464,160.115,110.026)
C2: (46.614,156.717,108.072)
N1: (45.956,155.702,108.650)
N3: (47.538,157.512,108.586)
N6: (45.565,154.398,110.521)
N7: (47.737,156.103,111.866)
N9: (48.663,157.795,110.725)
O5': (48.833,159.642,114.163)
O3': (47.551,161.980,111.264)
OP2: (50.219,160.028,116.221)
C3': (48.118,160.688,111.386)
C1': (49.429,159.001,110.426)
C5': (49.518,160.761,113.575)
O4': (50.058,159.429,111.621)
C8: (48.601,157.085,111.892)
O2': (49.115,161.046,109.187)
C6: (46.235,155.396,109.938)
C5: (47.211,156.158,110.588)
C4: (47.792,157.177,109.864)
P: (49.158,159.162,115.652)
C4': (49.476,160.685,112.061)
C2': (48.464,160.115,110.026)
C2: (46.614,156.717,108.072)
N1: (45.956,155.702,108.650)
N3: (47.538,157.512,108.586)
N6: (45.565,154.398,110.521)
N7: (47.737,156.103,111.866)
N9: (48.663,157.795,110.725)
O5': (48.833,159.642,114.163)
O3': (47.551,161.980,111.264)
Image (generated by PyMOL):