Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A710:A709
Extra
PDB:
ATOM 1 O3' U A 709 41.661 33.376 -8.409 1.00 75.03 O
ATOM 2 P G A 710 41.651 34.732 -7.549 1.00 78.59 P
ATOM 3 OP1 G A 710 40.459 34.652 -6.648 1.00 70.35 O
ATOM 4 OP2 G A 710 41.802 35.883 -8.483 1.00 73.52 O
ATOM 5 O5' G A 710 43.003 34.662 -6.705 1.00 74.51 O
ATOM 6 C5' G A 710 43.207 33.653 -5.717 1.00 73.61 C
ATOM 7 C4' G A 710 44.565 33.814 -5.067 1.00 73.37 C
ATOM 8 O4' G A 710 45.605 33.591 -6.058 1.00 76.07 O
ATOM 9 C3' G A 710 44.882 35.192 -4.508 1.00 72.49 C
ATOM 10 O3' G A 710 44.354 35.389 -3.207 1.00 70.53 O
ATOM 11 C2' G A 710 46.403 35.207 -4.516 1.00 73.99 C
ATOM 12 O2' G A 710 46.943 34.494 -3.423 1.00 70.44 O
ATOM 13 C1' G A 710 46.704 34.456 -5.809 1.00 75.81 C
ATOM 14 N9 G A 710 46.809 35.391 -6.925 1.00 77.33 N
ATOM 15 C8 G A 710 45.863 35.625 -7.898 1.00 79.84 C
ATOM 16 N7 G A 710 46.212 36.560 -8.739 1.00 81.73 N
ATOM 17 C5 G A 710 47.467 36.964 -8.305 1.00 77.68 C
ATOM 18 C6 G A 710 48.330 37.959 -8.812 1.00 73.99 C
ATOM 19 O6 G A 710 48.142 38.724 -9.774 1.00 69.68 O
ATOM 20 N1 G A 710 49.510 38.033 -8.077 1.00 73.49 N
ATOM 21 C2 G A 710 49.812 37.257 -6.986 1.00 75.25 C
ATOM 22 N2 G A 710 51.001 37.472 -6.423 1.00 76.28 N
ATOM 23 N3 G A 710 49.008 36.337 -6.488 1.00 75.45 N
ATOM 24 C4 G A 710 47.859 36.241 -7.195 1.00 75.70 C
ATOM 25 P G A 711 44.096 36.891 -2.682 1.00 67.45 P
ATOM 26 OP1 G A 711 43.412 36.804 -1.356 1.00 60.95 O
ATOM 27 OP2 G A 711 43.442 37.614 -3.803 1.00 68.61 O
ATOM 28 O5' G A 711 45.557 37.516 -2.490 1.00 71.38 O
TER
ATOM 1 O3' C B 708 39.791 31.252 -14.104 1.00 70.57 O
ATOM 2 P U B 709 39.511 32.520 -13.159 1.00 80.34 P
ATOM 3 OP1 U B 709 38.286 32.234 -12.356 1.00 78.79 O
ATOM 4 OP2 U B 709 39.554 33.715 -14.045 1.00 66.25 O
ATOM 5 O5' U B 709 40.775 32.591 -12.181 1.00 81.07 O
ATOM 6 C5' U B 709 40.930 31.664 -11.099 1.00 73.76 C
ATOM 7 C4' U B 709 42.183 31.964 -10.298 1.00 73.69 C
ATOM 8 O4' U B 709 43.354 31.836 -11.141 1.00 70.06 O
ATOM 9 C3' U B 709 42.311 33.346 -9.670 1.00 75.88 C
ATOM 10 O3' U B 709 41.661 33.376 -8.409 1.00 75.03 O
ATOM 11 C2' U B 709 43.815 33.500 -9.493 1.00 73.67 C
ATOM 12 O2' U B 709 44.268 32.856 -8.321 1.00 74.75 O
ATOM 13 C1' U B 709 44.356 32.731 -10.698 1.00 70.09 C
ATOM 14 N1 U B 709 44.749 33.581 -11.826 1.00 70.17 N
ATOM 15 C2 U B 709 45.963 34.228 -11.758 1.00 71.97 C
ATOM 16 O2 U B 709 46.695 34.167 -10.792 1.00 72.58 O
ATOM 17 N3 U B 709 46.287 34.957 -12.869 1.00 70.41 N
ATOM 18 C4 U B 709 45.534 35.104 -14.010 1.00 68.81 C
ATOM 19 O4 U B 709 46.024 35.664 -14.988 1.00 66.21 O
ATOM 20 C5 U B 709 44.278 34.431 -13.982 1.00 72.00 C
ATOM 21 C6 U B 709 43.941 33.709 -12.921 1.00 70.89 C
ATOM 22 P G B 710 41.651 34.732 -7.549 1.00 78.59 P
ATOM 23 OP1 G B 710 40.459 34.652 -6.648 1.00 70.35 O
ATOM 24 OP2 G B 710 41.802 35.883 -8.483 1.00 73.52 O
ATOM 25 O5' G B 710 43.003 34.662 -6.705 1.00 74.51 O
TER
ATOM 2 P G A 710 41.651 34.732 -7.549 1.00 78.59 P
ATOM 3 OP1 G A 710 40.459 34.652 -6.648 1.00 70.35 O
ATOM 4 OP2 G A 710 41.802 35.883 -8.483 1.00 73.52 O
ATOM 5 O5' G A 710 43.003 34.662 -6.705 1.00 74.51 O
ATOM 6 C5' G A 710 43.207 33.653 -5.717 1.00 73.61 C
ATOM 7 C4' G A 710 44.565 33.814 -5.067 1.00 73.37 C
ATOM 8 O4' G A 710 45.605 33.591 -6.058 1.00 76.07 O
ATOM 9 C3' G A 710 44.882 35.192 -4.508 1.00 72.49 C
ATOM 10 O3' G A 710 44.354 35.389 -3.207 1.00 70.53 O
ATOM 11 C2' G A 710 46.403 35.207 -4.516 1.00 73.99 C
ATOM 12 O2' G A 710 46.943 34.494 -3.423 1.00 70.44 O
ATOM 13 C1' G A 710 46.704 34.456 -5.809 1.00 75.81 C
ATOM 14 N9 G A 710 46.809 35.391 -6.925 1.00 77.33 N
ATOM 15 C8 G A 710 45.863 35.625 -7.898 1.00 79.84 C
ATOM 16 N7 G A 710 46.212 36.560 -8.739 1.00 81.73 N
ATOM 17 C5 G A 710 47.467 36.964 -8.305 1.00 77.68 C
ATOM 18 C6 G A 710 48.330 37.959 -8.812 1.00 73.99 C
ATOM 19 O6 G A 710 48.142 38.724 -9.774 1.00 69.68 O
ATOM 20 N1 G A 710 49.510 38.033 -8.077 1.00 73.49 N
ATOM 21 C2 G A 710 49.812 37.257 -6.986 1.00 75.25 C
ATOM 22 N2 G A 710 51.001 37.472 -6.423 1.00 76.28 N
ATOM 23 N3 G A 710 49.008 36.337 -6.488 1.00 75.45 N
ATOM 24 C4 G A 710 47.859 36.241 -7.195 1.00 75.70 C
ATOM 25 P G A 711 44.096 36.891 -2.682 1.00 67.45 P
ATOM 26 OP1 G A 711 43.412 36.804 -1.356 1.00 60.95 O
ATOM 27 OP2 G A 711 43.442 37.614 -3.803 1.00 68.61 O
ATOM 28 O5' G A 711 45.557 37.516 -2.490 1.00 71.38 O
TER
ATOM 1 O3' C B 708 39.791 31.252 -14.104 1.00 70.57 O
ATOM 2 P U B 709 39.511 32.520 -13.159 1.00 80.34 P
ATOM 3 OP1 U B 709 38.286 32.234 -12.356 1.00 78.79 O
ATOM 4 OP2 U B 709 39.554 33.715 -14.045 1.00 66.25 O
ATOM 5 O5' U B 709 40.775 32.591 -12.181 1.00 81.07 O
ATOM 6 C5' U B 709 40.930 31.664 -11.099 1.00 73.76 C
ATOM 7 C4' U B 709 42.183 31.964 -10.298 1.00 73.69 C
ATOM 8 O4' U B 709 43.354 31.836 -11.141 1.00 70.06 O
ATOM 9 C3' U B 709 42.311 33.346 -9.670 1.00 75.88 C
ATOM 10 O3' U B 709 41.661 33.376 -8.409 1.00 75.03 O
ATOM 11 C2' U B 709 43.815 33.500 -9.493 1.00 73.67 C
ATOM 12 O2' U B 709 44.268 32.856 -8.321 1.00 74.75 O
ATOM 13 C1' U B 709 44.356 32.731 -10.698 1.00 70.09 C
ATOM 14 N1 U B 709 44.749 33.581 -11.826 1.00 70.17 N
ATOM 15 C2 U B 709 45.963 34.228 -11.758 1.00 71.97 C
ATOM 16 O2 U B 709 46.695 34.167 -10.792 1.00 72.58 O
ATOM 17 N3 U B 709 46.287 34.957 -12.869 1.00 70.41 N
ATOM 18 C4 U B 709 45.534 35.104 -14.010 1.00 68.81 C
ATOM 19 O4 U B 709 46.024 35.664 -14.988 1.00 66.21 O
ATOM 20 C5 U B 709 44.278 34.431 -13.982 1.00 72.00 C
ATOM 21 C6 U B 709 43.941 33.709 -12.921 1.00 70.89 C
ATOM 22 P G B 710 41.651 34.732 -7.549 1.00 78.59 P
ATOM 23 OP1 G B 710 40.459 34.652 -6.648 1.00 70.35 O
ATOM 24 OP2 G B 710 41.802 35.883 -8.483 1.00 73.52 O
ATOM 25 O5' G B 710 43.003 34.662 -6.705 1.00 74.51 O
TER
Atoms:
OP1: (40.459,34.652,-6.648)
OP2: (41.802,35.883,-8.483)
C3': (44.882,35.192,-4.508)
C1': (46.704,34.456,-5.809)
C5': (43.207,33.653,-5.717)
O6: (48.142,38.724,-9.774)
O4': (45.605,33.591,-6.058)
C8: (45.863,35.625,-7.898)
C2: (49.812,37.257,-6.986)
C6: (48.330,37.959,-8.812)
C5: (47.467,36.964,-8.305)
C4: (47.859,36.241,-7.195)
P: (41.651,34.732,-7.549)
C4': (44.565,33.814,-5.067)
C2': (46.403,35.207,-4.516)
O2': (46.943,34.494,-3.423)
N1: (49.510,38.033,-8.077)
N2: (51.001,37.472,-6.423)
N3: (49.008,36.337,-6.488)
N7: (46.212,36.560,-8.739)
N9: (46.809,35.391,-6.925)
O5': (43.003,34.662,-6.705)
O3': (44.354,35.389,-3.207)
OP2: (41.802,35.883,-8.483)
C3': (44.882,35.192,-4.508)
C1': (46.704,34.456,-5.809)
C5': (43.207,33.653,-5.717)
O6: (48.142,38.724,-9.774)
O4': (45.605,33.591,-6.058)
C8: (45.863,35.625,-7.898)
C2: (49.812,37.257,-6.986)
C6: (48.330,37.959,-8.812)
C5: (47.467,36.964,-8.305)
C4: (47.859,36.241,-7.195)
P: (41.651,34.732,-7.549)
C4': (44.565,33.814,-5.067)
C2': (46.403,35.207,-4.516)
O2': (46.943,34.494,-3.423)
N1: (49.510,38.033,-8.077)
N2: (51.001,37.472,-6.423)
N3: (49.008,36.337,-6.488)
N7: (46.212,36.560,-8.739)
N9: (46.809,35.391,-6.925)
O5': (43.003,34.662,-6.705)
O3': (44.354,35.389,-3.207)
C4: (45.534,35.104,-14.010)
N3: (46.287,34.957,-12.869)
OP1: (38.286,32.234,-12.356)
OP2: (39.554,33.715,-14.045)
C2: (45.963,34.228,-11.758)
C1': (44.356,32.731,-10.698)
C3': (42.311,33.346,-9.670)
O5': (40.775,32.591,-12.181)
O4': (43.354,31.836,-11.141)
C5': (40.930,31.664,-11.099)
P: (39.511,32.520,-13.159)
C4': (42.183,31.964,-10.298)
C2': (43.815,33.500,-9.493)
O2': (44.268,32.856,-8.321)
N1: (44.749,33.581,-11.826)
O4: (46.024,35.664,-14.988)
O2: (46.695,34.167,-10.792)
C6: (43.941,33.709,-12.921)
C5: (44.278,34.431,-13.982)
O3': (41.661,33.376,-8.409)
N3: (46.287,34.957,-12.869)
OP1: (38.286,32.234,-12.356)
OP2: (39.554,33.715,-14.045)
C2: (45.963,34.228,-11.758)
C1': (44.356,32.731,-10.698)
C3': (42.311,33.346,-9.670)
O5': (40.775,32.591,-12.181)
O4': (43.354,31.836,-11.141)
C5': (40.930,31.664,-11.099)
P: (39.511,32.520,-13.159)
C4': (42.183,31.964,-10.298)
C2': (43.815,33.500,-9.493)
O2': (44.268,32.856,-8.321)
N1: (44.749,33.581,-11.826)
O4: (46.024,35.664,-14.988)
O2: (46.695,34.167,-10.792)
C6: (43.941,33.709,-12.921)
C5: (44.278,34.431,-13.982)
O3': (41.661,33.376,-8.409)
Image (generated by PyMOL):