Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01683:01352
Extra
PDB:
ATOM 1 O3' U A1682 60.040 165.461 86.589 1.00 36.36 O
ATOM 2 P C A1683 58.888 164.393 86.280 1.00 36.39 P
ATOM 3 OP1 C A1683 59.096 163.232 87.174 1.00 37.94 O
ATOM 4 OP2 C A1683 58.824 164.202 84.812 1.00 35.53 O
ATOM 5 O5' C A1683 57.540 165.114 86.706 1.00 37.39 O
ATOM 6 C5' C A1683 57.354 165.596 88.038 1.00 37.21 C
ATOM 7 C4' C A1683 56.275 166.646 88.053 1.00 37.86 C
ATOM 8 O4' C A1683 54.979 166.022 87.871 1.00 37.45 O
ATOM 9 C3' C A1683 56.128 167.383 89.365 1.00 39.34 C
ATOM 10 O3' C A1683 57.098 168.411 89.470 1.00 41.68 O
ATOM 11 C2' C A1683 54.708 167.908 89.264 1.00 39.43 C
ATOM 12 O2' C A1683 54.613 168.990 88.363 1.00 42.09 O
ATOM 13 C1' C A1683 54.007 166.701 88.648 1.00 37.98 C
ATOM 14 N1 C A1683 53.493 165.777 89.674 1.00 37.57 N
ATOM 15 C2 C A1683 52.207 165.972 90.170 1.00 37.90 C
ATOM 16 O2 C A1683 51.534 166.910 89.735 1.00 39.73 O
ATOM 17 N3 C A1683 51.728 165.140 91.112 1.00 37.70 N
ATOM 18 C4 C A1683 52.484 164.144 91.564 1.00 39.20 C
ATOM 19 N4 C A1683 51.973 163.347 92.498 1.00 42.71 N
ATOM 20 C5 C A1683 53.798 163.919 91.081 1.00 38.89 C
ATOM 21 C6 C A1683 54.259 164.750 90.143 1.00 38.67 C
ATOM 22 P G A1684 57.413 169.052 90.898 1.00 39.95 P
ATOM 23 OP1 G A1684 58.639 169.858 90.729 1.00 41.01 O
ATOM 24 OP2 G A1684 57.382 167.971 91.915 1.00 40.37 O
ATOM 25 O5' G A1684 56.168 170.015 91.121 1.00 40.34 O
TER
ATOM 1 O3' A B1351 47.822 178.028 86.300 1.00 51.96 O
ATOM 2 P A B1352 47.382 177.260 87.639 1.00 54.74 P
ATOM 3 OP1 A B1352 46.868 175.933 87.233 1.00 54.38 O
ATOM 4 OP2 A B1352 46.518 178.175 88.435 1.00 52.85 O
ATOM 5 O5' A B1352 48.740 177.034 88.435 1.00 52.49 O
ATOM 6 C5' A B1352 49.415 178.134 89.064 1.00 50.70 C
ATOM 7 C4' A B1352 50.880 177.818 89.234 1.00 48.60 C
ATOM 8 O4' A B1352 51.055 176.753 90.200 1.00 48.26 O
ATOM 9 C3' A B1352 51.558 177.310 87.981 1.00 47.37 C
ATOM 10 O3' A B1352 51.947 178.401 87.174 1.00 47.33 O
ATOM 11 C2' A B1352 52.740 176.537 88.540 1.00 46.83 C
ATOM 12 O2' A B1352 53.785 177.398 88.927 1.00 47.93 O
ATOM 13 C1' A B1352 52.124 175.915 89.796 1.00 46.98 C
ATOM 14 N9 A B1352 51.596 174.559 89.626 1.00 45.45 N
ATOM 15 C8 A B1352 50.279 174.177 89.671 1.00 44.73 C
ATOM 16 N7 A B1352 50.096 172.891 89.514 1.00 45.18 N
ATOM 17 C5 A B1352 51.378 172.389 89.351 1.00 44.28 C
ATOM 18 C6 A B1352 51.858 171.092 89.149 1.00 43.44 C
ATOM 19 N6 A B1352 51.075 170.019 89.093 1.00 43.39 N
ATOM 20 N1 A B1352 53.187 170.930 89.011 1.00 43.56 N
ATOM 21 C2 A B1352 53.974 172.005 89.086 1.00 43.91 C
ATOM 22 N3 A B1352 53.644 173.275 89.282 1.00 44.05 N
ATOM 23 C4 A B1352 52.313 173.404 89.409 1.00 44.65 C
ATOM 24 P C B1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 25 OP1 C B1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 26 OP2 C B1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 27 O5' C B1353 52.828 177.562 84.989 1.00 46.51 O
TER
ATOM 2 P C A1683 58.888 164.393 86.280 1.00 36.39 P
ATOM 3 OP1 C A1683 59.096 163.232 87.174 1.00 37.94 O
ATOM 4 OP2 C A1683 58.824 164.202 84.812 1.00 35.53 O
ATOM 5 O5' C A1683 57.540 165.114 86.706 1.00 37.39 O
ATOM 6 C5' C A1683 57.354 165.596 88.038 1.00 37.21 C
ATOM 7 C4' C A1683 56.275 166.646 88.053 1.00 37.86 C
ATOM 8 O4' C A1683 54.979 166.022 87.871 1.00 37.45 O
ATOM 9 C3' C A1683 56.128 167.383 89.365 1.00 39.34 C
ATOM 10 O3' C A1683 57.098 168.411 89.470 1.00 41.68 O
ATOM 11 C2' C A1683 54.708 167.908 89.264 1.00 39.43 C
ATOM 12 O2' C A1683 54.613 168.990 88.363 1.00 42.09 O
ATOM 13 C1' C A1683 54.007 166.701 88.648 1.00 37.98 C
ATOM 14 N1 C A1683 53.493 165.777 89.674 1.00 37.57 N
ATOM 15 C2 C A1683 52.207 165.972 90.170 1.00 37.90 C
ATOM 16 O2 C A1683 51.534 166.910 89.735 1.00 39.73 O
ATOM 17 N3 C A1683 51.728 165.140 91.112 1.00 37.70 N
ATOM 18 C4 C A1683 52.484 164.144 91.564 1.00 39.20 C
ATOM 19 N4 C A1683 51.973 163.347 92.498 1.00 42.71 N
ATOM 20 C5 C A1683 53.798 163.919 91.081 1.00 38.89 C
ATOM 21 C6 C A1683 54.259 164.750 90.143 1.00 38.67 C
ATOM 22 P G A1684 57.413 169.052 90.898 1.00 39.95 P
ATOM 23 OP1 G A1684 58.639 169.858 90.729 1.00 41.01 O
ATOM 24 OP2 G A1684 57.382 167.971 91.915 1.00 40.37 O
ATOM 25 O5' G A1684 56.168 170.015 91.121 1.00 40.34 O
TER
ATOM 1 O3' A B1351 47.822 178.028 86.300 1.00 51.96 O
ATOM 2 P A B1352 47.382 177.260 87.639 1.00 54.74 P
ATOM 3 OP1 A B1352 46.868 175.933 87.233 1.00 54.38 O
ATOM 4 OP2 A B1352 46.518 178.175 88.435 1.00 52.85 O
ATOM 5 O5' A B1352 48.740 177.034 88.435 1.00 52.49 O
ATOM 6 C5' A B1352 49.415 178.134 89.064 1.00 50.70 C
ATOM 7 C4' A B1352 50.880 177.818 89.234 1.00 48.60 C
ATOM 8 O4' A B1352 51.055 176.753 90.200 1.00 48.26 O
ATOM 9 C3' A B1352 51.558 177.310 87.981 1.00 47.37 C
ATOM 10 O3' A B1352 51.947 178.401 87.174 1.00 47.33 O
ATOM 11 C2' A B1352 52.740 176.537 88.540 1.00 46.83 C
ATOM 12 O2' A B1352 53.785 177.398 88.927 1.00 47.93 O
ATOM 13 C1' A B1352 52.124 175.915 89.796 1.00 46.98 C
ATOM 14 N9 A B1352 51.596 174.559 89.626 1.00 45.45 N
ATOM 15 C8 A B1352 50.279 174.177 89.671 1.00 44.73 C
ATOM 16 N7 A B1352 50.096 172.891 89.514 1.00 45.18 N
ATOM 17 C5 A B1352 51.378 172.389 89.351 1.00 44.28 C
ATOM 18 C6 A B1352 51.858 171.092 89.149 1.00 43.44 C
ATOM 19 N6 A B1352 51.075 170.019 89.093 1.00 43.39 N
ATOM 20 N1 A B1352 53.187 170.930 89.011 1.00 43.56 N
ATOM 21 C2 A B1352 53.974 172.005 89.086 1.00 43.91 C
ATOM 22 N3 A B1352 53.644 173.275 89.282 1.00 44.05 N
ATOM 23 C4 A B1352 52.313 173.404 89.409 1.00 44.65 C
ATOM 24 P C B1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 25 OP1 C B1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 26 OP2 C B1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 27 O5' C B1353 52.828 177.562 84.989 1.00 46.51 O
TER
Atoms:
C2: (52.207,165.972,90.170)
OP1: (59.096,163.232,87.174)
OP2: (58.824,164.202,84.812)
C4: (52.484,164.144,91.564)
O5': (57.540,165.114,86.706)
C3': (56.128,167.383,89.365)
C1': (54.007,166.701,88.648)
O4': (54.979,166.022,87.871)
C5': (57.354,165.596,88.038)
P: (58.888,164.393,86.280)
O2: (51.534,166.910,89.735)
C4': (56.275,166.646,88.053)
C2': (54.708,167.908,89.264)
O2': (54.613,168.990,88.363)
N1: (53.493,165.777,89.674)
N3: (51.728,165.140,91.112)
N4: (51.973,163.347,92.498)
C6: (54.259,164.750,90.143)
C5: (53.798,163.919,91.081)
O3': (57.098,168.411,89.470)
OP1: (59.096,163.232,87.174)
OP2: (58.824,164.202,84.812)
C4: (52.484,164.144,91.564)
O5': (57.540,165.114,86.706)
C3': (56.128,167.383,89.365)
C1': (54.007,166.701,88.648)
O4': (54.979,166.022,87.871)
C5': (57.354,165.596,88.038)
P: (58.888,164.393,86.280)
O2: (51.534,166.910,89.735)
C4': (56.275,166.646,88.053)
C2': (54.708,167.908,89.264)
O2': (54.613,168.990,88.363)
N1: (53.493,165.777,89.674)
N3: (51.728,165.140,91.112)
N4: (51.973,163.347,92.498)
C6: (54.259,164.750,90.143)
C5: (53.798,163.919,91.081)
O3': (57.098,168.411,89.470)
OP1: (46.868,175.933,87.233)
OP2: (46.518,178.175,88.435)
C3': (51.558,177.310,87.981)
C1': (52.124,175.915,89.796)
C5': (49.415,178.134,89.064)
O4': (51.055,176.753,90.200)
C8: (50.279,174.177,89.671)
O2': (53.785,177.398,88.927)
C6: (51.858,171.092,89.149)
C5: (51.378,172.389,89.351)
C4: (52.313,173.404,89.409)
P: (47.382,177.260,87.639)
C4': (50.880,177.818,89.234)
C2': (52.740,176.537,88.540)
C2: (53.974,172.005,89.086)
N1: (53.187,170.930,89.011)
N3: (53.644,173.275,89.282)
N6: (51.075,170.019,89.093)
N7: (50.096,172.891,89.514)
N9: (51.596,174.559,89.626)
O5': (48.740,177.034,88.435)
O3': (51.947,178.401,87.174)
OP2: (46.518,178.175,88.435)
C3': (51.558,177.310,87.981)
C1': (52.124,175.915,89.796)
C5': (49.415,178.134,89.064)
O4': (51.055,176.753,90.200)
C8: (50.279,174.177,89.671)
O2': (53.785,177.398,88.927)
C6: (51.858,171.092,89.149)
C5: (51.378,172.389,89.351)
C4: (52.313,173.404,89.409)
P: (47.382,177.260,87.639)
C4': (50.880,177.818,89.234)
C2': (52.740,176.537,88.540)
C2: (53.974,172.005,89.086)
N1: (53.187,170.930,89.011)
N3: (53.644,173.275,89.282)
N6: (51.075,170.019,89.093)
N7: (50.096,172.891,89.514)
N9: (51.596,174.559,89.626)
O5': (48.740,177.034,88.435)
O3': (51.947,178.401,87.174)
Image (generated by PyMOL):