Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2405:A2404
Extra
PDB:
ATOM 1 O3' U A2404 71.966 108.310 159.143 1.00 54.44 O
ATOM 2 P G A2405 72.775 108.594 160.506 1.00 54.18 P
ATOM 3 OP1 G A2405 72.274 107.628 161.503 1.00 52.71 O
ATOM 4 OP2 G A2405 72.766 110.045 160.832 1.00 55.44 O
ATOM 5 O5' G A2405 74.266 108.179 160.131 1.00 54.66 O
ATOM 6 C5' G A2405 75.389 108.999 160.505 1.00 57.58 C
ATOM 7 C4' G A2405 76.433 108.975 159.420 1.00 60.29 C
ATOM 8 O4' G A2405 76.867 107.622 159.153 1.00 60.32 O
ATOM 9 C3' G A2405 75.965 109.548 158.097 1.00 62.00 C
ATOM 10 O3' G A2405 76.382 110.903 158.081 1.00 64.21 O
ATOM 11 C2' G A2405 76.728 108.722 157.070 1.00 62.18 C
ATOM 12 O2' G A2405 78.047 109.202 156.889 1.00 61.85 O
ATOM 13 C1' G A2405 76.791 107.361 157.769 1.00 61.76 C
ATOM 14 N9 G A2405 75.669 106.445 157.583 1.00 62.94 N
ATOM 15 C8 G A2405 74.329 106.726 157.677 1.00 62.40 C
ATOM 16 N7 G A2405 73.576 105.664 157.580 1.00 63.25 N
ATOM 17 C5 G A2405 74.474 104.623 157.386 1.00 63.87 C
ATOM 18 C6 G A2405 74.255 103.220 157.231 1.00 64.76 C
ATOM 19 O6 G A2405 73.188 102.591 157.248 1.00 65.56 O
ATOM 20 N1 G A2405 75.452 102.536 157.048 1.00 65.54 N
ATOM 21 C2 G A2405 76.699 103.115 157.020 1.00 66.00 C
ATOM 22 N2 G A2405 77.744 102.285 156.828 1.00 66.01 N
ATOM 23 N3 G A2405 76.913 104.411 157.170 1.00 65.05 N
ATOM 24 C4 G A2405 75.766 105.097 157.352 1.00 63.86 C
ATOM 25 P C A2406 75.495 112.015 157.359 1.00 65.20 P
ATOM 26 OP1 C A2406 75.137 111.471 156.031 1.00 66.68 O
ATOM 27 OP2 C A2406 76.262 113.290 157.459 1.00 62.82 O
ATOM 28 O5' C A2406 74.188 112.122 158.265 1.00 64.11 O
TER
ATOM 1 O3' G B2403 65.821 108.574 158.262 1.00 52.70 O
ATOM 2 P U B2404 66.767 108.894 159.510 1.00 54.03 P
ATOM 3 OP1 U B2404 66.803 107.636 160.279 1.00 53.91 O
ATOM 4 OP2 U B2404 66.303 110.149 160.156 1.00 51.86 O
ATOM 5 O5' U B2404 68.189 109.184 158.855 1.00 53.52 O
ATOM 6 C5' U B2404 68.900 108.162 158.144 1.00 53.32 C
ATOM 7 C4' U B2404 70.178 108.724 157.564 1.00 54.29 C
ATOM 8 O4' U B2404 69.855 109.809 156.659 1.00 53.77 O
ATOM 9 C3' U B2404 71.169 109.339 158.543 1.00 54.11 C
ATOM 10 O3' U B2404 71.966 108.310 159.143 1.00 54.44 O
ATOM 11 C2' U B2404 71.970 110.291 157.650 1.00 53.16 C
ATOM 12 O2' U B2404 72.958 109.655 156.870 1.00 53.26 O
ATOM 13 C1' U B2404 70.898 110.762 156.669 1.00 52.04 C
ATOM 14 N1 U B2404 70.320 112.088 156.908 1.00 49.98 N
ATOM 15 C2 U B2404 70.958 113.171 156.330 1.00 49.74 C
ATOM 16 O2 U B2404 72.006 113.076 155.712 1.00 49.70 O
ATOM 17 N3 U B2404 70.326 114.372 156.512 1.00 48.23 N
ATOM 18 C4 U B2404 69.158 114.598 157.216 1.00 47.58 C
ATOM 19 O4 U B2404 68.667 115.727 157.219 1.00 46.09 O
ATOM 20 C5 U B2404 68.586 113.433 157.820 1.00 46.99 C
ATOM 21 C6 U B2404 69.172 112.250 157.652 1.00 48.05 C
ATOM 22 P G B2405 72.775 108.594 160.506 1.00 54.18 P
ATOM 23 OP1 G B2405 72.274 107.628 161.503 1.00 52.71 O
ATOM 24 OP2 G B2405 72.766 110.045 160.832 1.00 55.44 O
ATOM 25 O5' G B2405 74.266 108.179 160.131 1.00 54.66 O
TER
ATOM 2 P G A2405 72.775 108.594 160.506 1.00 54.18 P
ATOM 3 OP1 G A2405 72.274 107.628 161.503 1.00 52.71 O
ATOM 4 OP2 G A2405 72.766 110.045 160.832 1.00 55.44 O
ATOM 5 O5' G A2405 74.266 108.179 160.131 1.00 54.66 O
ATOM 6 C5' G A2405 75.389 108.999 160.505 1.00 57.58 C
ATOM 7 C4' G A2405 76.433 108.975 159.420 1.00 60.29 C
ATOM 8 O4' G A2405 76.867 107.622 159.153 1.00 60.32 O
ATOM 9 C3' G A2405 75.965 109.548 158.097 1.00 62.00 C
ATOM 10 O3' G A2405 76.382 110.903 158.081 1.00 64.21 O
ATOM 11 C2' G A2405 76.728 108.722 157.070 1.00 62.18 C
ATOM 12 O2' G A2405 78.047 109.202 156.889 1.00 61.85 O
ATOM 13 C1' G A2405 76.791 107.361 157.769 1.00 61.76 C
ATOM 14 N9 G A2405 75.669 106.445 157.583 1.00 62.94 N
ATOM 15 C8 G A2405 74.329 106.726 157.677 1.00 62.40 C
ATOM 16 N7 G A2405 73.576 105.664 157.580 1.00 63.25 N
ATOM 17 C5 G A2405 74.474 104.623 157.386 1.00 63.87 C
ATOM 18 C6 G A2405 74.255 103.220 157.231 1.00 64.76 C
ATOM 19 O6 G A2405 73.188 102.591 157.248 1.00 65.56 O
ATOM 20 N1 G A2405 75.452 102.536 157.048 1.00 65.54 N
ATOM 21 C2 G A2405 76.699 103.115 157.020 1.00 66.00 C
ATOM 22 N2 G A2405 77.744 102.285 156.828 1.00 66.01 N
ATOM 23 N3 G A2405 76.913 104.411 157.170 1.00 65.05 N
ATOM 24 C4 G A2405 75.766 105.097 157.352 1.00 63.86 C
ATOM 25 P C A2406 75.495 112.015 157.359 1.00 65.20 P
ATOM 26 OP1 C A2406 75.137 111.471 156.031 1.00 66.68 O
ATOM 27 OP2 C A2406 76.262 113.290 157.459 1.00 62.82 O
ATOM 28 O5' C A2406 74.188 112.122 158.265 1.00 64.11 O
TER
ATOM 1 O3' G B2403 65.821 108.574 158.262 1.00 52.70 O
ATOM 2 P U B2404 66.767 108.894 159.510 1.00 54.03 P
ATOM 3 OP1 U B2404 66.803 107.636 160.279 1.00 53.91 O
ATOM 4 OP2 U B2404 66.303 110.149 160.156 1.00 51.86 O
ATOM 5 O5' U B2404 68.189 109.184 158.855 1.00 53.52 O
ATOM 6 C5' U B2404 68.900 108.162 158.144 1.00 53.32 C
ATOM 7 C4' U B2404 70.178 108.724 157.564 1.00 54.29 C
ATOM 8 O4' U B2404 69.855 109.809 156.659 1.00 53.77 O
ATOM 9 C3' U B2404 71.169 109.339 158.543 1.00 54.11 C
ATOM 10 O3' U B2404 71.966 108.310 159.143 1.00 54.44 O
ATOM 11 C2' U B2404 71.970 110.291 157.650 1.00 53.16 C
ATOM 12 O2' U B2404 72.958 109.655 156.870 1.00 53.26 O
ATOM 13 C1' U B2404 70.898 110.762 156.669 1.00 52.04 C
ATOM 14 N1 U B2404 70.320 112.088 156.908 1.00 49.98 N
ATOM 15 C2 U B2404 70.958 113.171 156.330 1.00 49.74 C
ATOM 16 O2 U B2404 72.006 113.076 155.712 1.00 49.70 O
ATOM 17 N3 U B2404 70.326 114.372 156.512 1.00 48.23 N
ATOM 18 C4 U B2404 69.158 114.598 157.216 1.00 47.58 C
ATOM 19 O4 U B2404 68.667 115.727 157.219 1.00 46.09 O
ATOM 20 C5 U B2404 68.586 113.433 157.820 1.00 46.99 C
ATOM 21 C6 U B2404 69.172 112.250 157.652 1.00 48.05 C
ATOM 22 P G B2405 72.775 108.594 160.506 1.00 54.18 P
ATOM 23 OP1 G B2405 72.274 107.628 161.503 1.00 52.71 O
ATOM 24 OP2 G B2405 72.766 110.045 160.832 1.00 55.44 O
ATOM 25 O5' G B2405 74.266 108.179 160.131 1.00 54.66 O
TER
Atoms:
OP1: (72.274,107.628,161.503)
OP2: (72.766,110.045,160.832)
C3': (75.965,109.548,158.097)
C1': (76.791,107.361,157.769)
C5': (75.389,108.999,160.505)
O6: (73.188,102.591,157.248)
O4': (76.867,107.622,159.153)
C8: (74.329,106.726,157.677)
C2: (76.699,103.115,157.020)
C6: (74.255,103.220,157.231)
C5: (74.474,104.623,157.386)
C4: (75.766,105.097,157.352)
P: (72.775,108.594,160.506)
C4': (76.433,108.975,159.420)
C2': (76.728,108.722,157.070)
O2': (78.047,109.202,156.889)
N1: (75.452,102.536,157.048)
N2: (77.744,102.285,156.828)
N3: (76.913,104.411,157.170)
N7: (73.576,105.664,157.580)
N9: (75.669,106.445,157.583)
O5': (74.266,108.179,160.131)
O3': (76.382,110.903,158.081)
OP2: (72.766,110.045,160.832)
C3': (75.965,109.548,158.097)
C1': (76.791,107.361,157.769)
C5': (75.389,108.999,160.505)
O6: (73.188,102.591,157.248)
O4': (76.867,107.622,159.153)
C8: (74.329,106.726,157.677)
C2: (76.699,103.115,157.020)
C6: (74.255,103.220,157.231)
C5: (74.474,104.623,157.386)
C4: (75.766,105.097,157.352)
P: (72.775,108.594,160.506)
C4': (76.433,108.975,159.420)
C2': (76.728,108.722,157.070)
O2': (78.047,109.202,156.889)
N1: (75.452,102.536,157.048)
N2: (77.744,102.285,156.828)
N3: (76.913,104.411,157.170)
N7: (73.576,105.664,157.580)
N9: (75.669,106.445,157.583)
O5': (74.266,108.179,160.131)
O3': (76.382,110.903,158.081)
C4: (69.158,114.598,157.216)
N3: (70.326,114.372,156.512)
OP1: (66.803,107.636,160.279)
OP2: (66.303,110.149,160.156)
C2: (70.958,113.171,156.330)
C1': (70.898,110.762,156.669)
C3': (71.169,109.339,158.543)
O5': (68.189,109.184,158.855)
O4': (69.855,109.809,156.659)
C5': (68.900,108.162,158.144)
P: (66.767,108.894,159.510)
C4': (70.178,108.724,157.564)
C2': (71.970,110.291,157.650)
O2': (72.958,109.655,156.870)
N1: (70.320,112.088,156.908)
O4: (68.667,115.727,157.219)
O2: (72.006,113.076,155.712)
C6: (69.172,112.250,157.652)
C5: (68.586,113.433,157.820)
O3': (71.966,108.310,159.143)
N3: (70.326,114.372,156.512)
OP1: (66.803,107.636,160.279)
OP2: (66.303,110.149,160.156)
C2: (70.958,113.171,156.330)
C1': (70.898,110.762,156.669)
C3': (71.169,109.339,158.543)
O5': (68.189,109.184,158.855)
O4': (69.855,109.809,156.659)
C5': (68.900,108.162,158.144)
P: (66.767,108.894,159.510)
C4': (70.178,108.724,157.564)
C2': (71.970,110.291,157.650)
O2': (72.958,109.655,156.870)
N1: (70.320,112.088,156.908)
O4: (68.667,115.727,157.219)
O2: (72.006,113.076,155.712)
C6: (69.172,112.250,157.652)
C5: (68.586,113.433,157.820)
O3': (71.966,108.310,159.143)
Image (generated by PyMOL):