ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:017:01277

Extra

PDB:
ATOM 1 O3' U A 16 27.818 130.590 63.863 1.00 31.23 O
ATOM 2 P U A 17 28.179 130.102 62.389 1.00 34.79 P
ATOM 3 OP1 U A 17 28.135 128.621 62.427 1.00 33.29 O
ATOM 4 OP2 U A 17 29.426 130.788 61.963 1.00 35.19 O
ATOM 5 O5' U A 17 26.983 130.674 61.504 1.00 35.26 O
ATOM 6 C5' U A 17 25.613 130.323 61.788 1.00 32.35 C
ATOM 7 C4' U A 17 24.666 131.292 61.122 1.00 30.29 C
ATOM 8 O4' U A 17 24.715 132.583 61.780 1.00 30.10 O
ATOM 9 C3' U A 17 24.965 131.618 59.674 1.00 31.86 C
ATOM 10 O3' U A 17 24.532 130.593 58.794 1.00 34.84 O
ATOM 11 C2' U A 17 24.217 132.929 59.494 1.00 31.95 C
ATOM 12 O2' U A 17 22.823 132.741 59.401 1.00 33.20 O
ATOM 13 C1' U A 17 24.503 133.615 60.828 1.00 31.63 C
ATOM 14 N1 U A 17 25.691 134.489 60.789 1.00 33.19 N
ATOM 15 C2 U A 17 25.511 135.833 60.454 1.00 34.80 C
ATOM 16 O2 U A 17 24.424 136.321 60.199 1.00 37.95 O
ATOM 17 N3 U A 17 26.659 136.584 60.429 1.00 32.41 N
ATOM 18 C4 U A 17 27.934 136.151 60.698 1.00 31.19 C
ATOM 19 O4 U A 17 28.867 136.941 60.613 1.00 28.82 O
ATOM 20 C5 U A 17 28.038 134.766 61.039 1.00 32.49 C
ATOM 21 C6 U A 17 26.945 134.002 61.071 1.00 32.00 C
ATOM 22 P G A 18 25.368 130.300 57.456 1.00 38.90 P
ATOM 23 OP1 G A 18 24.838 129.075 56.809 1.00 36.40 O
ATOM 24 OP2 G A 18 26.808 130.376 57.795 1.00 40.85 O
ATOM 25 O5' G A 18 25.021 131.554 56.543 1.00 39.89 O
TER

ATOM 1 O3' A B1276 14.122 130.301 58.956 1.00 38.17 O
ATOM 2 P A B1277 14.659 130.221 60.464 1.00 36.59 P
ATOM 3 OP1 A B1277 14.372 128.842 60.940 1.00 37.78 O
ATOM 4 OP2 A B1277 14.151 131.390 61.235 1.00 34.53 O
ATOM 5 O5' A B1277 16.234 130.387 60.302 1.00 37.60 O
ATOM 6 C5' A B1277 17.009 129.423 59.564 1.00 33.64 C
ATOM 7 C4' A B1277 18.436 129.891 59.452 1.00 33.39 C
ATOM 8 O4' A B1277 18.488 131.117 58.680 1.00 33.10 O
ATOM 9 C3' A B1277 19.107 130.275 60.758 1.00 33.53 C
ATOM 10 O3' A B1277 19.590 129.141 61.451 1.00 35.95 O
ATOM 11 C2' A B1277 20.238 131.159 60.272 1.00 32.33 C
ATOM 12 O2' A B1277 21.277 130.385 59.708 1.00 31.11 O
ATOM 13 C1' A B1277 19.527 131.947 59.174 1.00 31.30 C
ATOM 14 N9 A B1277 18.924 133.174 59.693 1.00 30.21 N
ATOM 15 C8 A B1277 17.623 133.389 60.070 1.00 28.96 C
ATOM 16 N7 A B1277 17.399 134.596 60.532 1.00 29.18 N
ATOM 17 C5 A B1277 18.635 135.219 60.453 1.00 29.66 C
ATOM 18 C6 A B1277 19.072 136.510 60.806 1.00 29.79 C
ATOM 19 N6 A B1277 18.284 137.443 61.339 1.00 29.04 N
ATOM 20 N1 A B1277 20.369 136.812 60.590 1.00 30.72 N
ATOM 21 C2 A B1277 21.170 135.876 60.060 1.00 30.51 C
ATOM 22 N3 A B1277 20.882 134.630 59.697 1.00 30.95 N
ATOM 23 C4 A B1277 19.582 134.359 59.923 1.00 31.09 C
ATOM 24 P G B1278 19.437 129.064 63.043 1.00 35.28 P
ATOM 25 OP1 G B1278 19.976 127.743 63.436 1.00 36.62 O
ATOM 26 OP2 G B1278 18.053 129.436 63.424 1.00 34.41 O
ATOM 27 O5' G B1278 20.413 130.205 63.568 1.00 37.02 O
TER

Atoms:
C4: (27.934,136.151,60.698)
N3: (26.659,136.584,60.429)
OP1: (28.135,128.621,62.427)
OP2: (29.426,130.788,61.963)
C2: (25.511,135.833,60.454)
C1': (24.503,133.615,60.828)
C3': (24.965,131.618,59.674)
O5': (26.983,130.674,61.504)
O4': (24.715,132.583,61.780)
C5': (25.613,130.323,61.788)
P: (28.179,130.102,62.389)
C4': (24.666,131.292,61.122)
C2': (24.217,132.929,59.494)
O2': (22.823,132.741,59.401)
N1: (25.691,134.489,60.789)
O4: (28.867,136.941,60.613)
O2: (24.424,136.321,60.199)
C6: (26.945,134.002,61.071)
C5: (28.038,134.766,61.039)
O3': (24.532,130.593,58.794)
OP1: (14.372,128.842,60.940)
OP2: (14.151,131.390,61.235)
C3': (19.107,130.275,60.758)
C1': (19.527,131.947,59.174)
C5': (17.009,129.423,59.564)
O4': (18.488,131.117,58.680)
C8: (17.623,133.389,60.070)
O2': (21.277,130.385,59.708)
C6: (19.072,136.510,60.806)
C5: (18.635,135.219,60.453)
C4: (19.582,134.359,59.923)
P: (14.659,130.221,60.464)
C4': (18.436,129.891,59.452)
C2': (20.238,131.159,60.272)
C2: (21.170,135.876,60.060)
N1: (20.369,136.812,60.590)
N3: (20.882,134.630,59.697)
N6: (18.284,137.443,61.339)
N7: (17.399,134.596,60.532)
N9: (18.924,133.174,59.693)
O5': (16.234,130.387,60.302)
O3': (19.590,129.141,61.451)
Image (generated by PyMOL):
PyMOL image
show in jmol